| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is dhbF [H]
Identifier: 78049592
GI number: 78049592
Start: 4634864
End: 4637071
Strand: Reverse
Name: dhbF [H]
Synonym: XCV4036
Alternate gene names: 78049592
Gene position: 4637071-4634864 (Counterclockwise)
Preceding gene: 78049593
Following gene: 78049591
Centisome position: 89.55
GC content: 64.36
Gene sequence:
>2208_bases ATGCACGCTGACGCCTCTCCCGTTTTTCCCCTGACCAAGGCGCAACGTGGCCTTTGGGTGGCCAACAAGTTGCATACCGA CAACACCTTGATGTTGGCCGAAGTATTGGAAATGTTCGGTCCGCTCAATCCCCAGGTGCTGATCCGCGCCAGCATGCAGC TGACGCACGAGTTCGATACGCTGCGCCTGTGTATCGTCGAGCGCGAGGGCGTGCCTTCGCAGGTGGTCTTGCCCGCGTAC AACGGCACGATTCCATACTTCGACGTCAGCTCAGATCCTGCTCCGCGTAATGCCGCCGAACATTGGATCGACGAAGAAAT CCGCAAGCCGGAAGATCTGCAGAACGGGCCGCTATGGCATTGCGCGGTGTTCCGTCTTGGCGAAGATCATCATCTGTGGG TGCAATGCGTGAGTCATCTGGTGATGGACGGCTATTGCGCGTCGATCATGATGCAGCGCATGGCCGTGCTCTATAACGCC TACCTGGCCGACGTGGAGCCTGCGCCTGCGCAGTACGGCAGTGCACTGTCGCTGCTCGAAATGGAACAGCACTATCGCAA CTCCGATCGGTTCCAGCGCGATCGCGAGTACTGGATGCAGCAGTTGGCCGATCTGCCGCCGCCGGCGACGCTGGCGCGGC CGGGCAATCAGCTGTCCACCGGGTTGTTGCGCGGCACCGGGCAGTTCTCGCCGCAGCAGGTGGTGCGTCTGCGCGCGCTG GGCAAGGAGTACGGGGCCAGCCTGCCGCAGATGCTGATTTCGCTGATTGCCGCGTACTACTACCGCTGCACCGGTGCCGA GGATCTGGTGCTGGCGATGCCGGTGACCGGCCGCATCAATGCGCGCTACCGGCAAACCGCAGGCCTGGTGGCCAACGTGA TTTCGCTGCGCCTGAAGATGGATCCGCAGCAGCCCATCCATACCTTGTTCGCGCAGGTGTCGTCGGTGGTGCGGCATGCA TTGCGCCATCAGCAATATCGCTTCGAGGACGTACGCCGCGATCTGGGCATGTTCGGGATGGAGCAGAAGTTCGCACGCCT GGCGGTGAACATCAAGGCCTTCGACTACACCTTGCGCTTCGGCGAGGCGTACGCGGTGCCGCATAACCTTTCCAACGGCC CCGCCGATGACCTCACCATCTTCTGCTACGAACGCGGCGATGGGGCAGCGCTGCGTTTCGATCTGGATGCCAACCCGGCG CTGTACGACAGCGAGGAGCTGGCCGAACACTGCCGTCGTCTGACCCATCTGGCCGACGCGGTATTGGCCGATCCGGAATG CGCGCTGGGCCAGGTCGATGTGCTCGGCGATAGCGAGCGCCGGCGTTTGCTGCATACCTGGAACAACACCGCAGCGCCGC TGCCGGAACCGGCCACGCTGTTGCACGGCATGCTGCAACGCGCCGAGTTGATGCCTGCGGCCGTGGTTGCGCAATACGAC AACCGCACGCTCGACTACGCCACGCTGTGCGAGCTTGCCTCGCGCATCGCTGCGCAATGGGTGGCCGATGGCGTGCGCCC TGGCGATGTGGTCGCGGTGGCGTTGCCGCGCAGCGAACACTTGCTGGTGGCGTTGCTGGCGGTGATGTGGAGCGGGGCGG CGTATCTGCCGCTGGATCCGGAGAGCCCGGCCGCACGCAACCGCCAGATGCTCAACGATTCCGGTGCCATTGGCCTGGTC TGCGAGCCAGCGCTGTGCGAGCGCTATCTGCTCGGTGGCATGGTCTGGCTGGATCCGCGCCCGGCCGTGTTGCCGGAGGC AATCGCACCGCTGGCGACGCCCGACGGCACCGCGTACGTGCTGTACACCTCCGGCTCCACCGGCGCGCCCAAGGGCGTGG AGATCAGCCATCGCAACCTGTTTAATTTCCTGCATGCGATGGAACACGAGCTGGCATTGCGCCCGCGCGACCGTGTGCTG GCCGTCACCACCATCACCTTCGATATCGCCGGGCTGGAGTTGTACCTGCCGTTGCTGGTGGGGGCGCGCGTGGTCATTGC ACCGGCCGGTATCAGCCACGACCCGCGCGGCCTGTCGCGGTTGATCGCCGACGAACACATCAGCGTGGTGCAGGCCACGC CATCGCTGTGGCGTATCCTGCTGGCCAATGAGGATCTGGTGCTGGATCGCATTCATGCGTTGATCGGCGGCGAGGCGTTG GTGCCGGAACTGGCCACCCAACTGCTCAGCCGGGTGTGGGGCGCCTGA
Upstream 100 bases:
>100_bases CCCTCGTTTTCTTAGGCCAGGTGCTGATTCGGCGTCCATCGACCGCATAACGGTTGAGGGGTGTCGACGGACTGCGCGCC ACACCAGAAGGATGCACGCA
Downstream 100 bases:
>100_bases CCCAGTTGTACGGGCCTACCGAAACCACGATCTGGTCGACCATCATGCCGTTGCAGTTGACCGATGCCGCCGCACCGCCG ATCGGCAGGCCGCTGCTCAA
Product: putative non-ribosomal peptide synthetase
Products: pyrophosphate; AMP; enterobactin; pyrophosphate; L-Seryl-AMP [C]
Alternate protein names: NA
Number of amino acids: Translated: 735; Mature: 735
Protein sequence:
>735_residues MHADASPVFPLTKAQRGLWVANKLHTDNTLMLAEVLEMFGPLNPQVLIRASMQLTHEFDTLRLCIVEREGVPSQVVLPAY NGTIPYFDVSSDPAPRNAAEHWIDEEIRKPEDLQNGPLWHCAVFRLGEDHHLWVQCVSHLVMDGYCASIMMQRMAVLYNA YLADVEPAPAQYGSALSLLEMEQHYRNSDRFQRDREYWMQQLADLPPPATLARPGNQLSTGLLRGTGQFSPQQVVRLRAL GKEYGASLPQMLISLIAAYYYRCTGAEDLVLAMPVTGRINARYRQTAGLVANVISLRLKMDPQQPIHTLFAQVSSVVRHA LRHQQYRFEDVRRDLGMFGMEQKFARLAVNIKAFDYTLRFGEAYAVPHNLSNGPADDLTIFCYERGDGAALRFDLDANPA LYDSEELAEHCRRLTHLADAVLADPECALGQVDVLGDSERRRLLHTWNNTAAPLPEPATLLHGMLQRAELMPAAVVAQYD NRTLDYATLCELASRIAAQWVADGVRPGDVVAVALPRSEHLLVALLAVMWSGAAYLPLDPESPAARNRQMLNDSGAIGLV CEPALCERYLLGGMVWLDPRPAVLPEAIAPLATPDGTAYVLYTSGSTGAPKGVEISHRNLFNFLHAMEHELALRPRDRVL AVTTITFDIAGLELYLPLLVGARVVIAPAGISHDPRGLSRLIADEHISVVQATPSLWRILLANEDLVLDRIHALIGGEAL VPELATQLLSRVWGA
Sequences:
>Translated_735_residues MHADASPVFPLTKAQRGLWVANKLHTDNTLMLAEVLEMFGPLNPQVLIRASMQLTHEFDTLRLCIVEREGVPSQVVLPAY NGTIPYFDVSSDPAPRNAAEHWIDEEIRKPEDLQNGPLWHCAVFRLGEDHHLWVQCVSHLVMDGYCASIMMQRMAVLYNA YLADVEPAPAQYGSALSLLEMEQHYRNSDRFQRDREYWMQQLADLPPPATLARPGNQLSTGLLRGTGQFSPQQVVRLRAL GKEYGASLPQMLISLIAAYYYRCTGAEDLVLAMPVTGRINARYRQTAGLVANVISLRLKMDPQQPIHTLFAQVSSVVRHA LRHQQYRFEDVRRDLGMFGMEQKFARLAVNIKAFDYTLRFGEAYAVPHNLSNGPADDLTIFCYERGDGAALRFDLDANPA LYDSEELAEHCRRLTHLADAVLADPECALGQVDVLGDSERRRLLHTWNNTAAPLPEPATLLHGMLQRAELMPAAVVAQYD NRTLDYATLCELASRIAAQWVADGVRPGDVVAVALPRSEHLLVALLAVMWSGAAYLPLDPESPAARNRQMLNDSGAIGLV CEPALCERYLLGGMVWLDPRPAVLPEAIAPLATPDGTAYVLYTSGSTGAPKGVEISHRNLFNFLHAMEHELALRPRDRVL AVTTITFDIAGLELYLPLLVGARVVIAPAGISHDPRGLSRLIADEHISVVQATPSLWRILLANEDLVLDRIHALIGGEAL VPELATQLLSRVWGA >Mature_735_residues MHADASPVFPLTKAQRGLWVANKLHTDNTLMLAEVLEMFGPLNPQVLIRASMQLTHEFDTLRLCIVEREGVPSQVVLPAY NGTIPYFDVSSDPAPRNAAEHWIDEEIRKPEDLQNGPLWHCAVFRLGEDHHLWVQCVSHLVMDGYCASIMMQRMAVLYNA YLADVEPAPAQYGSALSLLEMEQHYRNSDRFQRDREYWMQQLADLPPPATLARPGNQLSTGLLRGTGQFSPQQVVRLRAL GKEYGASLPQMLISLIAAYYYRCTGAEDLVLAMPVTGRINARYRQTAGLVANVISLRLKMDPQQPIHTLFAQVSSVVRHA LRHQQYRFEDVRRDLGMFGMEQKFARLAVNIKAFDYTLRFGEAYAVPHNLSNGPADDLTIFCYERGDGAALRFDLDANPA LYDSEELAEHCRRLTHLADAVLADPECALGQVDVLGDSERRRLLHTWNNTAAPLPEPATLLHGMLQRAELMPAAVVAQYD NRTLDYATLCELASRIAAQWVADGVRPGDVVAVALPRSEHLLVALLAVMWSGAAYLPLDPESPAARNRQMLNDSGAIGLV CEPALCERYLLGGMVWLDPRPAVLPEAIAPLATPDGTAYVLYTSGSTGAPKGVEISHRNLFNFLHAMEHELALRPRDRVL AVTTITFDIAGLELYLPLLVGARVVIAPAGISHDPRGLSRLIADEHISVVQATPSLWRILLANEDLVLDRIHALIGGEAL VPELATQLLSRVWGA
Specific function: Specifically adenylates threonine and glycine, and loads them onto their corresponding peptidyl carrier domains [H]
COG id: COG1020
COG function: function code Q; Non-ribosomal peptide synthetase modules and related proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 acyl carrier domain [H]
Homologues:
Organism=Escherichia coli, GI1786801, Length=705, Percent_Identity=28.2269503546099, Blast_Score=237, Evalue=2e-63,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010071 - InterPro: IPR009081 - InterPro: IPR020845 - InterPro: IPR000873 - InterPro: IPR001242 - InterPro: IPR006163 - InterPro: IPR020806 - InterPro: IPR001031 [H]
Pfam domain/function: PF00501 AMP-binding; PF00668 Condensation; PF00550 PP-binding; PF00975 Thioesterase [H]
EC number: 2.7.7.- [C]
Molecular weight: Translated: 81403; Mature: 81403
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: PS00455 AMP_BINDING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHADASPVFPLTKAQRGLWVANKLHTDNTLMLAEVLEMFGPLNPQVLIRASMQLTHEFDT CCCCCCCCCCHHHCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHCE LRLCIVEREGVPSQVVLPAYNGTIPYFDVSSDPAPRNAAEHWIDEEIRKPEDLQNGPLWH EEEEEEECCCCCCEEEEECCCCCCCEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEE CAVFRLGEDHHLWVQCVSHLVMDGYCASIMMQRMAVLYNAYLADVEPAPAQYGSALSLLE EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHH MEQHYRNSDRFQRDREYWMQQLADLPPPATLARPGNQLSTGLLRGTGQFSPQQVVRLRAL HHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHH GKEYGASLPQMLISLIAAYYYRCTGAEDLVLAMPVTGRINARYRQTAGLVANVISLRLKM HHHHCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHEEC DPQQPIHTLFAQVSSVVRHALRHQQYRFEDVRRDLGMFGMEQKFARLAVNIKAFDYTLRF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEEEEEEEEEEEC GEAYAVPHNLSNGPADDLTIFCYERGDGAALRFDLDANPALYDSEELAEHCRRLTHLADA CCEEECCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHH VLADPECALGQVDVLGDSERRRLLHTWNNTAAPLPEPATLLHGMLQRAELMPAAVVAQYD HHCCCCCCCCCEEECCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHCC NRTLDYATLCELASRIAAQWVADGVRPGDVVAVALPRSEHLLVALLAVMWSGAAYLPLDP CCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEECCCC ESPAARNRQMLNDSGAIGLVCEPALCERYLLGGMVWLDPRPAVLPEAIAPLATPDGTAYV CCCCHHHHHHHCCCCCEEEEECHHHHHHHHHCCEEEECCCCCCCHHHHCCCCCCCCCEEE LYTSGSTGAPKGVEISHRNLFNFLHAMEHELALRPRDRVLAVTTITFDIAGLELYLPLLV EEECCCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEHHHHHHHHHHHH GARVVIAPAGISHDPRGLSRLIADEHISVVQATPSLWRILLANEDLVLDRIHALIGGEAL CCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHCCCHH VPELATQLLSRVWGA HHHHHHHHHHHHHCC >Mature Secondary Structure MHADASPVFPLTKAQRGLWVANKLHTDNTLMLAEVLEMFGPLNPQVLIRASMQLTHEFDT CCCCCCCCCCHHHCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHCE LRLCIVEREGVPSQVVLPAYNGTIPYFDVSSDPAPRNAAEHWIDEEIRKPEDLQNGPLWH EEEEEEECCCCCCEEEEECCCCCCCEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEE CAVFRLGEDHHLWVQCVSHLVMDGYCASIMMQRMAVLYNAYLADVEPAPAQYGSALSLLE EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHH MEQHYRNSDRFQRDREYWMQQLADLPPPATLARPGNQLSTGLLRGTGQFSPQQVVRLRAL HHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHH GKEYGASLPQMLISLIAAYYYRCTGAEDLVLAMPVTGRINARYRQTAGLVANVISLRLKM HHHHCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHEEC DPQQPIHTLFAQVSSVVRHALRHQQYRFEDVRRDLGMFGMEQKFARLAVNIKAFDYTLRF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEEEEEEEEEEEC GEAYAVPHNLSNGPADDLTIFCYERGDGAALRFDLDANPALYDSEELAEHCRRLTHLADA CCEEECCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHH VLADPECALGQVDVLGDSERRRLLHTWNNTAAPLPEPATLLHGMLQRAELMPAAVVAQYD HHCCCCCCCCCEEECCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHCC NRTLDYATLCELASRIAAQWVADGVRPGDVVAVALPRSEHLLVALLAVMWSGAAYLPLDP CCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEECCCC ESPAARNRQMLNDSGAIGLVCEPALCERYLLGGMVWLDPRPAVLPEAIAPLATPDGTAYV CCCCHHHHHHHCCCCCEEEEECHHHHHHHHHCCEEEECCCCCCCHHHHCCCCCCCCCEEE LYTSGSTGAPKGVEISHRNLFNFLHAMEHELALRPRDRVLAVTTITFDIAGLELYLPLLV EEECCCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEHHHHHHHHHHHH GARVVIAPAGISHDPRGLSRLIADEHISVVQATPSLWRILLANEDLVLDRIHALIGGEAL CCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHCCCHH VPELATQLLSRVWGA HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: Phosphopantetheine. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 6 ATP; L-serine; 2,3-dihydroxybenzoate [C]
Specific reaction: 6 ATP + 3 L-serine + 3 2,3-dihydroxybenzoate = 6 pyrophosphate + 6 AMP + enterobactin ATP + L-serine = pyrophosphate + L-Seryl-AMP 6 ATP + 3 L-serine + 3 2,3-dihydroxybenzoate = 6 pyrophosphate + 6 AMP + enterobactin ATP + L-serine = pyrophosphate + L-Ser
General reaction: Transferases; Acyltransferases; Transferring groups other than amino-acyl groups [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11112781; 9384377; 10568751; 8550523 [H]