Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
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Accession | NC_007508 |
Length | 5,178,466 |
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The map label for this gene is gumP
Identifier: 78048325
GI number: 78048325
Start: 3149220
End: 3150068
Strand: Reverse
Name: gumP
Synonym: XCV2769
Alternate gene names: NA
Gene position: 3150068-3149220 (Counterclockwise)
Preceding gene: 78048326
Following gene: 78048324
Centisome position: 60.83
GC content: 66.31
Gene sequence:
>849_bases ATGCCGGTCCGCGTGTCGCTCGAGCTGCTGCGCGTGGGCCACTGTCGCCATTGCGAACGCATGGTGCGTGCAGATGGTCA CTGGCATGCGGTGGAATTCCCCGCACTGAGCGTGCTGATCCGGCATCCGCAGCGTGGCGCGCTGTTGTACGACACCGGCT ATGCCGCGCATTTTTTTCGTGCCACCGATCCCTGGCCGGAGCGCCTGTACCGCTGGACCACGCCAGTCAGCTTGCCCGCC GACCAAACCCTGGGCGCGCAGTTGAACAAACGTGGCGTATCGCTGGATGACATCGCCTGGTGCCTGATTTCGCACTTCCA CGCCGACCATGTCGGCGGCCTGCGCGATCTGCCCAATGCGCGCTTTCTCTGCCTGCGCGCGGATTACCAGCAGCTGCGCA GCTGTTCGCGCATGGGTGGGTTGCGCCGCGCCTTGCTGCCGCAGCTGCTGCCGGACGACTTCGACCAGCGGCTGCAGTTT GCCGACCAGGCGCCGCAGCGCGCGTTGACTGGAGCCTGGCAGGGGCTCGGCCCGGCCTACGATCTGTTCGAGGACGGCAG CGTGCTCGCGGTATCGCTACCCGGGCACGTGCCCGGCCAGATGGGACTGTGGGTACGCGATCAGCACGACCGCGAGGTGT TGCTGTGTGCGGACGCGGTATGGTCCTCGGCCACCTGGGCCACGCTGCAATGGCCGGCCTGGCCCACGCGTCTGCTGATG CACGACTGGCACGCATTCCAGCACACCGTGCATCGCTTGCACGCCTTGTCGCACGCCCATCCGGAACTGGTCATCCTGCC TTCGCATTGCCAGCCGAGTCTTGACCGTTATCAACCGGAGTGGCGATGA
Upstream 100 bases:
>100_bases ATCACGCACGCGTCGACCTGGGCCTGCAGCGTGGCGATCTGGTCGCGCTGCTCGGCACCGGGGCAGGGCTTGCCATCGGC GGCATGGTGTTGCGTTACTG
Downstream 100 bases:
>100_bases GCCTGCGCATTCTCGTGACCGGCGCGTCCGGTTTTGTCGGTGGTGCATTCCTGCGGCGCTTTCAGGGGCAGCCGGGCGTC GAGATTCACGGTATCGGCCG
Product: GumP protein
Products: NA
Alternate protein names: Beta-Lactamase Domain-Containing Protein; GumP Protein; Metal Dependent Hydrolase; Zn-Dependent Hydrolase; Metallo-Beta-Lactamase Protein; Metallo-Beta-Lactamase Family Protein; Metallo-Beta-Lactamase Superfamily Protein
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MPVRVSLELLRVGHCRHCERMVRADGHWHAVEFPALSVLIRHPQRGALLYDTGYAAHFFRATDPWPERLYRWTTPVSLPA DQTLGAQLNKRGVSLDDIAWCLISHFHADHVGGLRDLPNARFLCLRADYQQLRSCSRMGGLRRALLPQLLPDDFDQRLQF ADQAPQRALTGAWQGLGPAYDLFEDGSVLAVSLPGHVPGQMGLWVRDQHDREVLLCADAVWSSATWATLQWPAWPTRLLM HDWHAFQHTVHRLHALSHAHPELVILPSHCQPSLDRYQPEWR
Sequences:
>Translated_282_residues MPVRVSLELLRVGHCRHCERMVRADGHWHAVEFPALSVLIRHPQRGALLYDTGYAAHFFRATDPWPERLYRWTTPVSLPA DQTLGAQLNKRGVSLDDIAWCLISHFHADHVGGLRDLPNARFLCLRADYQQLRSCSRMGGLRRALLPQLLPDDFDQRLQF ADQAPQRALTGAWQGLGPAYDLFEDGSVLAVSLPGHVPGQMGLWVRDQHDREVLLCADAVWSSATWATLQWPAWPTRLLM HDWHAFQHTVHRLHALSHAHPELVILPSHCQPSLDRYQPEWR >Mature_281_residues PVRVSLELLRVGHCRHCERMVRADGHWHAVEFPALSVLIRHPQRGALLYDTGYAAHFFRATDPWPERLYRWTTPVSLPAD QTLGAQLNKRGVSLDDIAWCLISHFHADHVGGLRDLPNARFLCLRADYQQLRSCSRMGGLRRALLPQLLPDDFDQRLQFA DQAPQRALTGAWQGLGPAYDLFEDGSVLAVSLPGHVPGQMGLWVRDQHDREVLLCADAVWSSATWATLQWPAWPTRLLMH DWHAFQHTVHRLHALSHAHPELVILPSHCQPSLDRYQPEWR
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32267; Mature: 32136
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVRVSLELLRVGHCRHCERMVRADGHWHAVEFPALSVLIRHPQRGALLYDTGYAAHFFR CCEEEEHHHHHHCCHHHHHHHHHCCCCEEEEHHHHHHHHHHCCCCCEEEEECCCCEEEEC ATDPWPERLYRWTTPVSLPADQTLGAQLNKRGVSLDDIAWCLISHFHADHVGGLRDLPNA CCCCCHHHHHCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHCCCCC RFLCLRADYQQLRSCSRMGGLRRALLPQLLPDDFDQRLQFADQAPQRALTGAWQGLGPAY EEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHCCCCHH DLFEDGSVLAVSLPGHVPGQMGLWVRDQHDREVLLCADAVWSSATWATLQWPAWPTRLLM HHCCCCCEEEEECCCCCCCCCCEEEECCCCCEEEEEEHHHHCCCCEEEEECCCCHHHHHH HDWHAFQHTVHRLHALSHAHPELVILPSHCQPSLDRYQPEWR HHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHCCCCCC >Mature Secondary Structure PVRVSLELLRVGHCRHCERMVRADGHWHAVEFPALSVLIRHPQRGALLYDTGYAAHFFR CEEEEHHHHHHCCHHHHHHHHHCCCCEEEEHHHHHHHHHHCCCCCEEEEECCCCEEEEC ATDPWPERLYRWTTPVSLPADQTLGAQLNKRGVSLDDIAWCLISHFHADHVGGLRDLPNA CCCCCHHHHHCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHCCCCC RFLCLRADYQQLRSCSRMGGLRRALLPQLLPDDFDQRLQFADQAPQRALTGAWQGLGPAY EEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHCCCCHH DLFEDGSVLAVSLPGHVPGQMGLWVRDQHDREVLLCADAVWSSATWATLQWPAWPTRLLM HHCCCCCEEEEECCCCCCCCCCEEEECCCCCEEEEEEHHHHCCCCEEEEECCCCHHHHHH HDWHAFQHTVHRLHALSHAHPELVILPSHCQPSLDRYQPEWR HHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA