| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is zraS [C]
Identifier: 78048310
GI number: 78048310
Start: 3134052
End: 3135674
Strand: Reverse
Name: zraS [C]
Synonym: XCV2754
Alternate gene names: 78048310
Gene position: 3135674-3134052 (Counterclockwise)
Preceding gene: 78048311
Following gene: 78048304
Centisome position: 60.55
GC content: 63.03
Gene sequence:
>1623_bases TTGAACGATCCCGGTCACGGAGAGCTGCGGGCGCCTCAGATCAGCGACACACGCGGCCTGCCTGTCGAGAAGCACCGCTC GGACATCTTCTTTGCCGCAGTGGAAACCACGCGCATGCCGATGACGGTGACCGACCCCCATCTTCCGGATAACCCCATCG TGTTCGCCAACCGCGCGTTCCTGGAGATGACCGGCTATGCCGCCGATGAGGTCATCGGCAACAACTGCCGTTTCCTGCAG GGGCCCGATACCGATCCGGCCAGCATCAGCGATGTGCGCGCATCGATCGAAAGCCGCAGCGAATTTGCCACCGAGGTGCT GAACTACCGCAAGGACGGCTCCTCGTTCTGGAATGCGCTTTTCATCTCGCCGGTGTTCGACGACAAGGGCAACCTGGTCT ATTTCTTCGGCTCGCAATTGGATGTGAGCCGGCGACGCGATGCCGAAGATGCGCTGCGCCAGGCGCAGAAGATGGAAGCG CTGGGCCAGCTGACCGGCGGCATCGCGCACGATTTCAACAATCTGCTGCAGGTGATGTCTGGACATCTGGAAGTGATCCA GATGATGGCCAGCGCCGGCGCGGGGAATGCCGAGCGGATTGCCTTCAGTGCCGAACACGCGGCGGCCGCCGCTGCCAAGG CGGCCACCTTGACCCAGCAGTTGCTGGCGTTTTCGCGCAAGCAGAAACTGCGCGGGCGGGTCGTGAACCTCAACGGGCTG GTGGCCGGCATGACCAACATGGCCGAGCGCGCGCTGGGGGGCGGCGTCACCCTGCGCCAAGCGCTGGAAGAAGGGCTGTG GAACTGCCAGATCGACACCACCCAGGCAGAGGTGGCGCTGTTGAATGTGTTGATCAATGCGCGCGACGCGATGGCGCAGG CAGAACGCAAGGAAGTCACGGTGCAGACCCAGAACGTGGAGATCTCAGGCCACGACCTGGCGATGTATCACCAGCTGTCC CCGGGCCGCTACGTCAGCATCGCCGTGACCGACACCGGCTCGGGCATGCCGCCGGAGGTGGTCAGCCGGGTGATGGAACC GTTCTTCACCACCAAGGAGGAAGGGCAGGGCACCGGCCTGTGCCTGTCGATGGTGTACGGCTTCGTCAAGCAGTCTGGCG GCACCGTGCGCATCTATAGCGAGGTGGGCGAAGGCACCACGGTGCGGCTGTATTTCCCCGCCTCGAGCGAATTCGAAAAC GATTTGCAGGCCGCCAAGAGCCGCGCCATCGACAAGGGTGGCAACGAAACCATCCTGGTGGTGGAAGACAAGCAGGACGT GGCGGTGGTGGCGCGGATGTTTCTGGAAAACGCCGGTTACCGCGTCCTGTCTGCATCCAGCGGACGCGAGGCGATGGAGA TCCTGGAGAAGACCCCGCAGGTGGATGCGCTGTTCACCGACCTGATCATGCCTGGTGGTATGAACGGGGTGATGCTCGCC CGTGAGGCGCGCCGCATGTTGCCGAAGATCAAGATATTGCTCACCACCGGCTACGCCGATGCGAGCATCCAGCGCACCGA TGTGGGCGGCGCCGAATTCGATGTGGTCGACAAACCCTATACGCAGAAGGAACTGCTCAAGCGCATCCGCATGTTGCTGG ATGGGCCGACCGGGGTTGGTTGA
Upstream 100 bases:
>100_bases GCGGGCGCGGCCGTACGGGAAAGGCTCATGGATGTGACGAATCGCCTCACCGGACCCAACTAGACTGTGGCCACGGGAAT GGCCCCGCGGAGAACATCAC
Downstream 100 bases:
>100_bases GGCCGGCAGACCGCCAGTGCGATGCCGCTGCGGCATCGCACTGCAGCCGCGATCGCAGTTTCAAGATTGCGTCAGTTCGC CAGCGCAGCGCCCGCAGCCG
Product: histidine kinase
Products: NA
Alternate protein names: Blue-light-activated histidine kinase; Response regulator [H]
Number of amino acids: Translated: 540; Mature: 540
Protein sequence:
>540_residues MNDPGHGELRAPQISDTRGLPVEKHRSDIFFAAVETTRMPMTVTDPHLPDNPIVFANRAFLEMTGYAADEVIGNNCRFLQ GPDTDPASISDVRASIESRSEFATEVLNYRKDGSSFWNALFISPVFDDKGNLVYFFGSQLDVSRRRDAEDALRQAQKMEA LGQLTGGIAHDFNNLLQVMSGHLEVIQMMASAGAGNAERIAFSAEHAAAAAAKAATLTQQLLAFSRKQKLRGRVVNLNGL VAGMTNMAERALGGGVTLRQALEEGLWNCQIDTTQAEVALLNVLINARDAMAQAERKEVTVQTQNVEISGHDLAMYHQLS PGRYVSIAVTDTGSGMPPEVVSRVMEPFFTTKEEGQGTGLCLSMVYGFVKQSGGTVRIYSEVGEGTTVRLYFPASSEFEN DLQAAKSRAIDKGGNETILVVEDKQDVAVVARMFLENAGYRVLSASSGREAMEILEKTPQVDALFTDLIMPGGMNGVMLA REARRMLPKIKILLTTGYADASIQRTDVGGAEFDVVDKPYTQKELLKRIRMLLDGPTGVG
Sequences:
>Translated_540_residues MNDPGHGELRAPQISDTRGLPVEKHRSDIFFAAVETTRMPMTVTDPHLPDNPIVFANRAFLEMTGYAADEVIGNNCRFLQ GPDTDPASISDVRASIESRSEFATEVLNYRKDGSSFWNALFISPVFDDKGNLVYFFGSQLDVSRRRDAEDALRQAQKMEA LGQLTGGIAHDFNNLLQVMSGHLEVIQMMASAGAGNAERIAFSAEHAAAAAAKAATLTQQLLAFSRKQKLRGRVVNLNGL VAGMTNMAERALGGGVTLRQALEEGLWNCQIDTTQAEVALLNVLINARDAMAQAERKEVTVQTQNVEISGHDLAMYHQLS PGRYVSIAVTDTGSGMPPEVVSRVMEPFFTTKEEGQGTGLCLSMVYGFVKQSGGTVRIYSEVGEGTTVRLYFPASSEFEN DLQAAKSRAIDKGGNETILVVEDKQDVAVVARMFLENAGYRVLSASSGREAMEILEKTPQVDALFTDLIMPGGMNGVMLA REARRMLPKIKILLTTGYADASIQRTDVGGAEFDVVDKPYTQKELLKRIRMLLDGPTGVG >Mature_540_residues MNDPGHGELRAPQISDTRGLPVEKHRSDIFFAAVETTRMPMTVTDPHLPDNPIVFANRAFLEMTGYAADEVIGNNCRFLQ GPDTDPASISDVRASIESRSEFATEVLNYRKDGSSFWNALFISPVFDDKGNLVYFFGSQLDVSRRRDAEDALRQAQKMEA LGQLTGGIAHDFNNLLQVMSGHLEVIQMMASAGAGNAERIAFSAEHAAAAAAKAATLTQQLLAFSRKQKLRGRVVNLNGL VAGMTNMAERALGGGVTLRQALEEGLWNCQIDTTQAEVALLNVLINARDAMAQAERKEVTVQTQNVEISGHDLAMYHQLS PGRYVSIAVTDTGSGMPPEVVSRVMEPFFTTKEEGQGTGLCLSMVYGFVKQSGGTVRIYSEVGEGTTVRLYFPASSEFEN DLQAAKSRAIDKGGNETILVVEDKQDVAVVARMFLENAGYRVLSASSGREAMEILEKTPQVDALFTDLIMPGGMNGVMLA REARRMLPKIKILLTTGYADASIQRTDVGGAEFDVVDKPYTQKELLKRIRMLLDGPTGVG
Specific function: Photosensitive kinase and response regulator that is involved in increased bacterial virulence upon exposure to light [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Homo sapiens, GI6912446, Length=95, Percent_Identity=36.8421052631579, Blast_Score=76, Evalue=9e-14, Organism=Homo sapiens, GI38569493, Length=142, Percent_Identity=28.8732394366197, Blast_Score=76, Evalue=1e-13, Organism=Homo sapiens, GI27886667, Length=94, Percent_Identity=36.1702127659575, Blast_Score=75, Evalue=1e-13, Organism=Escherichia coli, GI1790436, Length=267, Percent_Identity=28.4644194756554, Blast_Score=99, Evalue=9e-22, Organism=Escherichia coli, GI1788549, Length=339, Percent_Identity=23.598820058997, Blast_Score=88, Evalue=1e-18, Organism=Escherichia coli, GI48994928, Length=459, Percent_Identity=23.0936819172113, Blast_Score=65, Evalue=1e-11, Organism=Drosophila melanogaster, GI17136946, Length=101, Percent_Identity=32.6732673267327, Blast_Score=77, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR001610 - InterPro: IPR000014 - InterPro: IPR000700 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR001789 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS; PF00072 Response_reg [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 58757; Mature: 58757
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDPGHGELRAPQISDTRGLPVEKHRSDIFFAAVETTRMPMTVTDPHLPDNPIVFANRAF CCCCCCCCEECCCCCCCCCCCCHHCCCCEEEEEEECCCCCEEECCCCCCCCCEEEECCEE LEMTGYAADEVIGNNCRFLQGPDTDPASISDVRASIESRSEFATEVLNYRKDGSSFWNAL EEECCCCHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHEE FISPVFDDKGNLVYFFGSQLDVSRRRDAEDALRQAQKMEALGQLTGGIAHDFNNLLQVMS EEEEEECCCCCEEEEECCCCCCHHCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH GHLEVIQMMASAGAGNAERIAFSAEHAAAAAAKAATLTQQLLAFSRKQKLRGRVVNLNGL HHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECHH VAGMTNMAERALGGGVTLRQALEEGLWNCQIDTTQAEVALLNVLINARDAMAQAERKEVT HHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHEEE VQTQNVEISGHDLAMYHQLSPGRYVSIAVTDTGSGMPPEVVSRVMEPFFTTKEEGQGTGL EEEEEEEECCCCEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCHH CLSMVYGFVKQSGGTVRIYSEVGEGTTVRLYFPASSEFENDLQAAKSRAIDKGGNETILV HHHHHHHHHHCCCCEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEE VEDKQDVAVVARMFLENAGYRVLSASSGREAMEILEKTPQVDALFTDLIMPGGMNGVMLA EECCCHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHH REARRMLPKIKILLTTGYADASIQRTDVGGAEFDVVDKPYTQKELLKRIRMLLDGPTGVG HHHHHCCCEEEEEEEECCCCCCEEEECCCCCCEECCCCCCCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MNDPGHGELRAPQISDTRGLPVEKHRSDIFFAAVETTRMPMTVTDPHLPDNPIVFANRAF CCCCCCCCEECCCCCCCCCCCCHHCCCCEEEEEEECCCCCEEECCCCCCCCCEEEECCEE LEMTGYAADEVIGNNCRFLQGPDTDPASISDVRASIESRSEFATEVLNYRKDGSSFWNAL EEECCCCHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHEE FISPVFDDKGNLVYFFGSQLDVSRRRDAEDALRQAQKMEALGQLTGGIAHDFNNLLQVMS EEEEEECCCCCEEEEECCCCCCHHCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH GHLEVIQMMASAGAGNAERIAFSAEHAAAAAAKAATLTQQLLAFSRKQKLRGRVVNLNGL HHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECHH VAGMTNMAERALGGGVTLRQALEEGLWNCQIDTTQAEVALLNVLINARDAMAQAERKEVT HHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHEEE VQTQNVEISGHDLAMYHQLSPGRYVSIAVTDTGSGMPPEVVSRVMEPFFTTKEEGQGTGL EEEEEEEECCCCEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCHH CLSMVYGFVKQSGGTVRIYSEVGEGTTVRLYFPASSEFENDLQAAKSRAIDKGGNETILV HHHHHHHHHHCCCCEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEE VEDKQDVAVVARMFLENAGYRVLSASSGREAMEILEKTPQVDALFTDLIMPGGMNGVMLA EECCCHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHH REARRMLPKIKILLTTGYADASIQRTDVGGAEFDVVDKPYTQKELLKRIRMLLDGPTGVG HHHHHCCCEEEEEEEECCCCCCEEEECCCCCCEECCCCCCCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA