| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78048311
Identifier: 78048311
GI number: 78048311
Start: 3135805
End: 3136416
Strand: Reverse
Name: 78048311
Synonym: XCV2755
Alternate gene names: NA
Gene position: 3136416-3135805 (Counterclockwise)
Preceding gene: 78048315
Following gene: 78048310
Centisome position: 60.57
GC content: 64.05
Gene sequence:
>612_bases ATGACGACACGATGCCGATGGTGGGCAACCGTGCTGGCAACGACCGCGACGCTGGCCATGTCAGCCGGCGCCGCCACGCT GCCAGCCGGTGCCACCAGACTGTTACCTGCCGGGCAGTCGGTGATGAGTGTCGCTAGTGCGGATCTCACCGGCGATGGCC GGCAGGATTACGTGGTTGCGTTGCGTGCATCCGCAGAACAAACGCTGCGCGGCCCTGGCCATGCAGCACCGCCGCGTACC CTGCTGGTGCTGGTTGCAAACGCCGACGGTGGGTTTGTGGAAGCCGCGCGCAACATGCGGGTGATCTTCAACGCCGACGA AGGCGGGCAGTGCGATCCATTTCTGGACAGCGACCAGGGCCTGGTCACGAAGGGCGCGTATTTCACCGTGCAAAACGCGG TGGCGTGCGGACAACACTGGACCGACTACATCACCTTTCGTTACGACCGCCGCCGCGGCGTCTTCGTGTTCCACAAGCGC GTGATCGAATCATGGGAAATGAACACCCAGGACACGCCCGATGCCCAAGCGCTGCGCCTGAGCGAGCACAAGGAAATTGC CGCCGACCCGCGTAAGCCGGTCCTGCTCTCTGCCTATACGCCTGCACCGTGA
Upstream 100 bases:
>100_bases CGTGCGACGACACGCCCCTACGTGTTGCGCGCCGATGCCGGTGCGCGGGGCAGGAGCGGCCGGCTATGCTGGCAGCCCCG ACGCAGACCAGGACACCGCG
Downstream 100 bases:
>100_bases TGGCGCTATCGCAGCGCATCCGGTTCGATGGCGGGCGCGGCCGTACGGGAAAGGCTCATGGATGTGACGAATCGCCTCAC CGGACCCAACTAGACTGTGG
Product: putative secreted protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 203; Mature: 202
Protein sequence:
>203_residues MTTRCRWWATVLATTATLAMSAGAATLPAGATRLLPAGQSVMSVASADLTGDGRQDYVVALRASAEQTLRGPGHAAPPRT LLVLVANADGGFVEAARNMRVIFNADEGGQCDPFLDSDQGLVTKGAYFTVQNAVACGQHWTDYITFRYDRRRGVFVFHKR VIESWEMNTQDTPDAQALRLSEHKEIAADPRKPVLLSAYTPAP
Sequences:
>Translated_203_residues MTTRCRWWATVLATTATLAMSAGAATLPAGATRLLPAGQSVMSVASADLTGDGRQDYVVALRASAEQTLRGPGHAAPPRT LLVLVANADGGFVEAARNMRVIFNADEGGQCDPFLDSDQGLVTKGAYFTVQNAVACGQHWTDYITFRYDRRRGVFVFHKR VIESWEMNTQDTPDAQALRLSEHKEIAADPRKPVLLSAYTPAP >Mature_202_residues TTRCRWWATVLATTATLAMSAGAATLPAGATRLLPAGQSVMSVASADLTGDGRQDYVVALRASAEQTLRGPGHAAPPRTL LVLVANADGGFVEAARNMRVIFNADEGGQCDPFLDSDQGLVTKGAYFTVQNAVACGQHWTDYITFRYDRRRGVFVFHKRV IESWEMNTQDTPDAQALRLSEHKEIAADPRKPVLLSAYTPAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21952; Mature: 21821
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTRCRWWATVLATTATLAMSAGAATLPAGATRLLPAGQSVMSVASADLTGDGRQDYVVA CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCHHHHHHHHCCCCCCCCCEEEEE LRASAEQTLRGPGHAAPPRTLLVLVANADGGFVEAARNMRVIFNADEGGQCDPFLDSDQG EECCCHHHHCCCCCCCCCCEEEEEEECCCCCCEECCCCEEEEEECCCCCCCCCCCCCCCC LVTKGAYFTVQNAVACGQHWTDYITFRYDRRRGVFVFHKRVIESWEMNTQDTPDAQALRL EEECCEEEEEHHHHHHCCCCCEEEEEEEECCCCEEEHHHHHHHHHCCCCCCCCCHHHEEC SEHKEIAADPRKPVLLSAYTPAP CCCCHHCCCCCCCEEEEECCCCC >Mature Secondary Structure TTRCRWWATVLATTATLAMSAGAATLPAGATRLLPAGQSVMSVASADLTGDGRQDYVVA CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCHHHHHHHHCCCCCCCCCEEEEE LRASAEQTLRGPGHAAPPRTLLVLVANADGGFVEAARNMRVIFNADEGGQCDPFLDSDQG EECCCHHHHCCCCCCCCCCEEEEEEECCCCCCEECCCCEEEEEECCCCCCCCCCCCCCCC LVTKGAYFTVQNAVACGQHWTDYITFRYDRRRGVFVFHKRVIESWEMNTQDTPDAQALRL EEECCEEEEEHHHHHHCCCCCEEEEEEEECCCCEEEHHHHHHHHHCCCCCCCCCHHHEEC SEHKEIAADPRKPVLLSAYTPAP CCCCHHCCCCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA