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The map label for this gene is fdhD [H]

Identifier: 78048221

GI number: 78048221

Start: 3004809

End: 3005654

Strand: Reverse

Name: fdhD [H]

Synonym: XCV2665

Alternate gene names: 78048221

Gene position: 3005654-3004809 (Counterclockwise)

Preceding gene: 78048222

Following gene: 78048220

Centisome position: 58.04

GC content: 66.19

Gene sequence:

>846_bases
ATGACCAGTCCGTCTTCCCGCTCCGTGCGTCCGGGCAGTGTGGTACGCACGGTCCGTCGCCATCGAGGCGGCCGCAGCGC
CACGGTGCAGGACATGGTGGCGGCCGAAATGCCGGTCGCCTTCATCTACAACGGCGTGCCGTTCGCGGTGATGATGGCCA
CGCCGGAGGACCTGGAGGATTTCGCACTGGGGTTCTCGTTGAGCGAAGGCATCGTCGATCACGCGCAGGACTTGCGCGTG
ATCGCGGTGGAGACGTTTCTGGAAGGCGCTTCGCTGCAAATAGAAATCCCGCCCGAGCGCGCAGCCGCGTTGGACCAACG
GCGGCGCAATCTGGACGGGCGCAGCGGTTGCGGGGTGTGCGGCAACGAGTCCATCGAAGCGGTGCTGCGTGTGCCGCCGG
TGCTGCACTCGTCGCTGCAGATCGACGTGGATGCCTTGGCGCATGCGCTGGATGCGCTGCATGCACGGCAGCCCATCGCC
GCGCAGACCGGCGCCGTGCACGCGGCTGCTTGGGCCGATGCGCAGGGCAATGTGCAGCTGGTCCGCGAAGACGTGGGCCG
GCATAACGCGTTGGATAAATTGATCGGTGCATTGGCGCGCGCGCGCATCGATGCATCGCACGGGTTCGCGGTGGTCACCA
GCCGCGCCAGTTACGAAATGGCCATGAAAGCCGCGCAGGCCCGAATTCCGCTGCTCGCAGCGATTTCGGCGCCAACTGCG
CTGGCGATCAGCCTGGCCGAGAGTGCGGGACTGACCCTGATCGGGTTTGCCCGCGATCACGATTGTGTCGTTTACAGCCA
TCCGCAGCGCCTGGATCTGGGCGTTGCGGTGGGAGAGCCCGCATGA

Upstream 100 bases:

>100_bases
CGCGCTGGTCGCGTTTGCCTGGCTGGCGGTGGGTATCCCGATGCTGTTCGGTATCTGGGTCACGCTGCAAAAAGCCTTCG
TGCTGTTCCATTGAGGTGAG

Downstream 100 bases:

>100_bases
GCAAGAAAACCATCAAGCAATACGACAATCCCGCGGGCGGCTGGGGCGCATTGCGCTCGGTGGCCAAGCACCTGATGGAA
CAGGACATCGCCGTGCAGGG

Product: formate dehydrogenase accessory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 280

Protein sequence:

>281_residues
MTSPSSRSVRPGSVVRTVRRHRGGRSATVQDMVAAEMPVAFIYNGVPFAVMMATPEDLEDFALGFSLSEGIVDHAQDLRV
IAVETFLEGASLQIEIPPERAAALDQRRRNLDGRSGCGVCGNESIEAVLRVPPVLHSSLQIDVDALAHALDALHARQPIA
AQTGAVHAAAWADAQGNVQLVREDVGRHNALDKLIGALARARIDASHGFAVVTSRASYEMAMKAAQARIPLLAAISAPTA
LAISLAESAGLTLIGFARDHDCVVYSHPQRLDLGVAVGEPA

Sequences:

>Translated_281_residues
MTSPSSRSVRPGSVVRTVRRHRGGRSATVQDMVAAEMPVAFIYNGVPFAVMMATPEDLEDFALGFSLSEGIVDHAQDLRV
IAVETFLEGASLQIEIPPERAAALDQRRRNLDGRSGCGVCGNESIEAVLRVPPVLHSSLQIDVDALAHALDALHARQPIA
AQTGAVHAAAWADAQGNVQLVREDVGRHNALDKLIGALARARIDASHGFAVVTSRASYEMAMKAAQARIPLLAAISAPTA
LAISLAESAGLTLIGFARDHDCVVYSHPQRLDLGVAVGEPA
>Mature_280_residues
TSPSSRSVRPGSVVRTVRRHRGGRSATVQDMVAAEMPVAFIYNGVPFAVMMATPEDLEDFALGFSLSEGIVDHAQDLRVI
AVETFLEGASLQIEIPPERAAALDQRRRNLDGRSGCGVCGNESIEAVLRVPPVLHSSLQIDVDALAHALDALHARQPIAA
QTGAVHAAAWADAQGNVQLVREDVGRHNALDKLIGALARARIDASHGFAVVTSRASYEMAMKAAQARIPLLAAISAPTAL
AISLAESAGLTLIGFARDHDCVVYSHPQRLDLGVAVGEPA

Specific function: Necessary for formate dehydrogenase activity [H]

COG id: COG1526

COG function: function code C; Uncharacterized protein required for formate dehydrogenase activity

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhD family [H]

Homologues:

Organism=Escherichia coli, GI1790329, Length=241, Percent_Identity=45.643153526971, Blast_Score=205, Evalue=2e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003786 [H]

Pfam domain/function: PF02634 FdhD-NarQ [H]

EC number: NA

Molecular weight: Translated: 29683; Mature: 29552

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSPSSRSVRPGSVVRTVRRHRGGRSATVQDMVAAEMPVAFIYNGVPFAVMMATPEDLED
CCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEECCCCEEEEEECCCCHHH
FALGFSLSEGIVDHAQDLRVIAVETFLEGASLQIEIPPERAAALDQRRRNLDGRSGCGVC
HHHCCCHHHHHHHHHHCCEEEEEEHHHCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCC
GNESIEAVLRVPPVLHSSLQIDVDALAHALDALHARQPIAAQTGAVHAAAWADAQGNVQL
CCHHHHHHHHCCHHHHCCCEECHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHH
VREDVGRHNALDKLIGALARARIDASHGFAVVTSRASYEMAMKAAQARIPLLAAISAPTA
HHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHCCCEEEEECCCHH
LAISLAESAGLTLIGFARDHDCVVYSHPQRLDLGVAVGEPA
HEEEHHCCCCEEEEEECCCCCEEEEECCCEEEEEEECCCCC
>Mature Secondary Structure 
TSPSSRSVRPGSVVRTVRRHRGGRSATVQDMVAAEMPVAFIYNGVPFAVMMATPEDLED
CCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEECCCCEEEEEECCCCHHH
FALGFSLSEGIVDHAQDLRVIAVETFLEGASLQIEIPPERAAALDQRRRNLDGRSGCGVC
HHHCCCHHHHHHHHHHCCEEEEEEHHHCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCC
GNESIEAVLRVPPVLHSSLQIDVDALAHALDALHARQPIAAQTGAVHAAAWADAQGNVQL
CCHHHHHHHHCCHHHHCCCEECHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHH
VREDVGRHNALDKLIGALARARIDASHGFAVVTSRASYEMAMKAAQARIPLLAAISAPTA
HHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHCCCEEEEECCCHH
LAISLAESAGLTLIGFARDHDCVVYSHPQRLDLGVAVGEPA
HEEEHHCCCCEEEEEECCCCCEEEEECCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12024217 [H]