| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is yegM [C]
Identifier: 78047126
GI number: 78047126
Start: 1770707
End: 1771792
Strand: Reverse
Name: yegM [C]
Synonym: XCV1570
Alternate gene names: 78047126
Gene position: 1771792-1770707 (Counterclockwise)
Preceding gene: 78047127
Following gene: 78047125
Centisome position: 34.21
GC content: 69.61
Gene sequence:
>1086_bases ATGCCGCACGCCCCTGATCGCATGGCGCATTTCCCGACCCTGGCGGCAATGCGTCCGCCCAGCATCGCCAAGGCGGTCGC CTGGATGCTGTTGATCGGCATCGGCATCGCCGCGGCGATCCTGGCACTGGCGCCGTGGGTGCAGACCGCCAGTGGCAAAG GCCAGGTCGTCTCGCTGGATCCCAGCGACCGTCAGCAACCGGTCACCGCCTTCGTGCCGGGCCGCGTCGAGCGCTGGTAC GTGCATGACGGCCAGCATGTTTCCAAGGGCGACCCGATCGCGCGTGTCGGCGATCTGGACCCGGACCTGCTCACCCGCCT GGCCAGCGAGCGCGCGCAGGCGCAGGCGGAAATCGCCGCCATCCAGCAGTCGCGTGCAGTGGCCAGCATCGACGTGGCGC GTAGCAGACAATTGCTGGCCGAAGGCCTGGCCGGACGCCGCGACTACGAGCTGACCCAGATCAAGGTGGCCGAAGCCGAC GCCAAGCTGGCCGAATCGCGCGCCAAGCTGACCCGCATCGACATCCAGCTGAATCGCCAGTCTGCACAGCTGGTGCGCGC CCCGCGCGACGGCCGCGTGCAGCAGCTCAATGCCGCCAGCGGCAGCGCCATGGTCTCGCCGGGCACCGTGCTGGCGGTGA TCGCGCCGGAACGGGTGGAACGCGCGGTCGAGCTGTATATCGACGGCCGCGACGTGCCGCTGATCCGCCCCGGCCGCCCG GTGCGGCTGGAATTCGAAGGCTGGCCGGCGATCCAGTTCAGCGGTTGGCCGTCGGTGGCGCACGGCATGTTCGACGGCCG GGTGCGCGCCATCGACCCCAACGCCGCGCCCGATGGGCTGTTCCGCATCCTGGTGGAGCCGATGCCGGGCAAGCCGGCAT GGCCGGCGCAGGAATTCGCCCGCCAGGGCGGCAAGGTGCGCGGCTGGGTGCAGGGCGAAACGGTCAAGGTCGGCTACGAA CTGTGGCGCCAGCTCAACAACTTCCCCTTGGAATTCGGACGGCGCCCGGCTGCGGCCACGCAGGAAGAGAGCAAGGCCAA GCCGGCCGCACCCAAGTCCGAAGACGAAGCGACGGGTAAGAAATGA
Upstream 100 bases:
>100_bases GAGGACATCACCCTGGATGGCTGGTTCCGGCTGGAGCCGGAGCGCCAGCAACGCTACGCCACACGCGCCGAGTTGATCGC ATCCACGCAGGAGGTGCCGC
Downstream 100 bases:
>100_bases TCGGCCGTCTTGTCGTCCTGTTGATCGCACTCAGCCCCGGTGCGGCATTCGCCCAGGCCGCTGCGCTGACGCTGGATGAG GTGCTGCAGTCCTCGGCACG
Product: membrane fusion protein
Products: NA
Alternate protein names: Secretion Protein HlyD; Secretion Protein HlyD Family Protein; Outer Membrane Efflux Protein; Multidrug Resistance Efflux Pump-Like Protein; HlyD Family Secretion Protein; Membrane Fusion Protein; Efflux Transporter Membrane Fusion Protein; Signal Peptide; Xin Secretion Protein; ABC Transporter Membrane Fusion Efflux Protein; RND Efflux Membrane Fusion Proteins; Secretion Protein; Biotin/Lipoyl Attachment Domain-Containing Protein; Multidrug Resistance Efflux Pump
Number of amino acids: Translated: 361; Mature: 360
Protein sequence:
>361_residues MPHAPDRMAHFPTLAAMRPPSIAKAVAWMLLIGIGIAAAILALAPWVQTASGKGQVVSLDPSDRQQPVTAFVPGRVERWY VHDGQHVSKGDPIARVGDLDPDLLTRLASERAQAQAEIAAIQQSRAVASIDVARSRQLLAEGLAGRRDYELTQIKVAEAD AKLAESRAKLTRIDIQLNRQSAQLVRAPRDGRVQQLNAASGSAMVSPGTVLAVIAPERVERAVELYIDGRDVPLIRPGRP VRLEFEGWPAIQFSGWPSVAHGMFDGRVRAIDPNAAPDGLFRILVEPMPGKPAWPAQEFARQGGKVRGWVQGETVKVGYE LWRQLNNFPLEFGRRPAAATQEESKAKPAAPKSEDEATGKK
Sequences:
>Translated_361_residues MPHAPDRMAHFPTLAAMRPPSIAKAVAWMLLIGIGIAAAILALAPWVQTASGKGQVVSLDPSDRQQPVTAFVPGRVERWY VHDGQHVSKGDPIARVGDLDPDLLTRLASERAQAQAEIAAIQQSRAVASIDVARSRQLLAEGLAGRRDYELTQIKVAEAD AKLAESRAKLTRIDIQLNRQSAQLVRAPRDGRVQQLNAASGSAMVSPGTVLAVIAPERVERAVELYIDGRDVPLIRPGRP VRLEFEGWPAIQFSGWPSVAHGMFDGRVRAIDPNAAPDGLFRILVEPMPGKPAWPAQEFARQGGKVRGWVQGETVKVGYE LWRQLNNFPLEFGRRPAAATQEESKAKPAAPKSEDEATGKK >Mature_360_residues PHAPDRMAHFPTLAAMRPPSIAKAVAWMLLIGIGIAAAILALAPWVQTASGKGQVVSLDPSDRQQPVTAFVPGRVERWYV HDGQHVSKGDPIARVGDLDPDLLTRLASERAQAQAEIAAIQQSRAVASIDVARSRQLLAEGLAGRRDYELTQIKVAEADA KLAESRAKLTRIDIQLNRQSAQLVRAPRDGRVQQLNAASGSAMVSPGTVLAVIAPERVERAVELYIDGRDVPLIRPGRPV RLEFEGWPAIQFSGWPSVAHGMFDGRVRAIDPNAAPDGLFRILVEPMPGKPAWPAQEFARQGGKVRGWVQGETVKVGYEL WRQLNNFPLEFGRRPAAATQEESKAKPAAPKSEDEATGKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39236; Mature: 39105
Theoretical pI: Translated: 10.30; Mature: 10.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHAPDRMAHFPTLAAMRPPSIAKAVAWMLLIGIGIAAAILALAPWVQTASGKGQVVSLD CCCCCCHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEC PSDRQQPVTAFVPGRVERWYVHDGQHVSKGDPIARVGDLDPDLLTRLASERAQAQAEIAA CCCCCCCEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH IQQSRAVASIDVARSRQLLAEGLAGRRDYELTQIKVAEADAKLAESRAKLTRIDIQLNRQ HHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEHHHHHHHHHHHHEEEEEEEECCC SAQLVRAPRDGRVQQLNAASGSAMVSPGTVLAVIAPERVERAVELYIDGRDVPLIRPGRP HHHHHCCCCCCCEEEECCCCCCEEECCCCEEEEECHHHHHHEEEEEECCCCCCEECCCCC VRLEFEGWPAIQFSGWPSVAHGMFDGRVRAIDPNAAPDGLFRILVEPMPGKPAWPAQEFA EEEEECCCCEEEECCCCHHHHCCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCHHHHH RQGGKVRGWVQGETVKVGYELWRQLNNFPLEFGRRPAAATQEESKAKPAAPKSEDEATGK HCCCCEEEEECCCEEEHHHHHHHHHCCCCHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCC K C >Mature Secondary Structure PHAPDRMAHFPTLAAMRPPSIAKAVAWMLLIGIGIAAAILALAPWVQTASGKGQVVSLD CCCCCHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEC PSDRQQPVTAFVPGRVERWYVHDGQHVSKGDPIARVGDLDPDLLTRLASERAQAQAEIAA CCCCCCCEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH IQQSRAVASIDVARSRQLLAEGLAGRRDYELTQIKVAEADAKLAESRAKLTRIDIQLNRQ HHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEHHHHHHHHHHHHEEEEEEEECCC SAQLVRAPRDGRVQQLNAASGSAMVSPGTVLAVIAPERVERAVELYIDGRDVPLIRPGRP HHHHHCCCCCCCEEEECCCCCCEEECCCCEEEEECHHHHHHEEEEEECCCCCCEECCCCC VRLEFEGWPAIQFSGWPSVAHGMFDGRVRAIDPNAAPDGLFRILVEPMPGKPAWPAQEFA EEEEECCCCEEEECCCCHHHHCCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCHHHHH RQGGKVRGWVQGETVKVGYELWRQLNNFPLEFGRRPAAATQEESKAKPAAPKSEDEATGK HCCCCEEEEECCCEEEHHHHHHHHHCCCCHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCC K C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA