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The map label for this gene is oprN5

Identifier: 78047125

GI number: 78047125

Start: 1769307

End: 1770710

Strand: Reverse

Name: oprN5

Synonym: XCV1569

Alternate gene names: NA

Gene position: 1770710-1769307 (Counterclockwise)

Preceding gene: 78047126

Following gene: 78047124

Centisome position: 34.19

GC content: 66.81

Gene sequence:

>1404_bases
ATGATCGGCCGTCTTGTCGTCCTGTTGATCGCACTCAGCCCCGGTGCGGCATTCGCCCAGGCCGCTGCGCTGACGCTGGA
TGAGGTGCTGCAGTCCTCGGCACGCTCGGCACCGCAGATCGTCGAAGCGCTGGCGAAGGTGCGCCAGGCCGAAGGCAAGG
GCATCTCGGCCGATGGCGCCTTCGACACGGTGTTCGACATCGAAGGCCGCTCGCGCGAGGCCGGCTATTACGACGGCAGT
ACGATCGAAACCGGGGTCAAGCGGCCGTTCGAAGAGAACGGCGGCTATTACTACGGTGGCTACCGCTCCTCGCGTGGCTC
CTTCCCGATCTACGAGGACAAGTCCTATACCGATCGCGGCGGCGAAGTGAAGGTCGGCGCGCTGTACGCGCTGCTGCGCG
ACCGCGTGATCGACGAACGCCGCACCAAGCGCAGTATCGCCAGCACCGATATCGATGTGGCCAAGTACGAAGCGGAAATG
GTGGCCATCGGCGTGCAGCGGCGCGCCGTGGATGCCTACCAGAACTGGGTCGCCGCCGGGCTGAAGTTGCGCGCCTACAA
CGAGCTGCTGCAACTGGCCGAGCAACGGCGCAATGCGATTTCGCGCCAGGTCACGCTCGGTGCGCGACCCACCATCCTGC
TGACCGAAAACGACCAGAATCTGGTGCGTCGTCGCGCCTTGGTGGTGCGCGCGGAACAGGACTTCGCCAATGCGGCCAAC
GCCTTGTCGCTGTATTTGCGCGACGAGGCCGGCATGCCGCTGATCGTGTCCGCCGAACGCCTGCCGGCCGACACCTCGGC
GCTGGAAGGACTGGCCGGCGCCAGCAAGATCACCGCGCCGGTGGAGCGCCCGGATTACCGCGCCGTGCTGACCCGCATCG
ACCAGGCCACCGCACGGCTGATGCTGGCCCAGAACGATCTCAAACCACGCCTGGATGTCAGCGTGGAAGTCAGCAAGGAT
CTGGGCCCGCCCGGCGTCGGCGGCCCGAACCGGTCGCTGACCGACGCCATCATCGGCTTCCGTTTCAGCGTGCCGCTGGA
AAACCGCGCCGCCAGGGGCCGCGTGGCCGAAGCGCGTGCCGAGATCGAAGCGCTGGATCAGCGCAGCCGTTTTCTACGCG
ACCAGATTTCGATCGAGGTCGAATCGATCGTCATCTCGCTCAATGCCGCCGAGCGGCTGGCCAAGATCGCCGATGAGGAA
CGCGGCCTGGCAGACCGCCTGGCCGCGGCCGAGCGGCGGCGCTTCGAGCTGGGCTCGGGTGACTTTTTCCTGGTCAACCA
GCGCGAGGAAACCGCCAACGACGCGCGCGTACGCCTGATCGATGCGCAGGCGCGCATCGCCTCTGCGCGTGCCGAACTGG
CGGCGGCCACCGCCGACCGGGATGCCTTGCAGTTGAGTCGTTGA

Upstream 100 bases:

>100_bases
TCCCCTTGGAATTCGGACGGCGCCCGGCTGCGGCCACGCAGGAAGAGAGCAAGGCCAAGCCGGCCGCACCCAAGTCCGAA
GACGAAGCGACGGGTAAGAA

Downstream 100 bases:

>100_bases
CCGCTCGGCTGCGCGCCGGGCAGGCGGTGATGCCGGGCAATCGCGCGGTTGTGCGAGTGACTTCGCGATGCCGCAGCGGC
ATCCGTGGATTCAAGCAATG

Product: outer membrane efflux protein

Products: NA

Alternate protein names: Outer Membrane Efflux Protein; Outer Membrane Protein-Like Protein; Outer Membrane Protein-Like; Signal Peptide; Multidrug Efflux Protein Outer Membrane Component

Number of amino acids: Translated: 467; Mature: 467

Protein sequence:

>467_residues
MIGRLVVLLIALSPGAAFAQAAALTLDEVLQSSARSAPQIVEALAKVRQAEGKGISADGAFDTVFDIEGRSREAGYYDGS
TIETGVKRPFEENGGYYYGGYRSSRGSFPIYEDKSYTDRGGEVKVGALYALLRDRVIDERRTKRSIASTDIDVAKYEAEM
VAIGVQRRAVDAYQNWVAAGLKLRAYNELLQLAEQRRNAISRQVTLGARPTILLTENDQNLVRRRALVVRAEQDFANAAN
ALSLYLRDEAGMPLIVSAERLPADTSALEGLAGASKITAPVERPDYRAVLTRIDQATARLMLAQNDLKPRLDVSVEVSKD
LGPPGVGGPNRSLTDAIIGFRFSVPLENRAARGRVAEARAEIEALDQRSRFLRDQISIEVESIVISLNAAERLAKIADEE
RGLADRLAAAERRRFELGSGDFFLVNQREETANDARVRLIDAQARIASARAELAAATADRDALQLSR

Sequences:

>Translated_467_residues
MIGRLVVLLIALSPGAAFAQAAALTLDEVLQSSARSAPQIVEALAKVRQAEGKGISADGAFDTVFDIEGRSREAGYYDGS
TIETGVKRPFEENGGYYYGGYRSSRGSFPIYEDKSYTDRGGEVKVGALYALLRDRVIDERRTKRSIASTDIDVAKYEAEM
VAIGVQRRAVDAYQNWVAAGLKLRAYNELLQLAEQRRNAISRQVTLGARPTILLTENDQNLVRRRALVVRAEQDFANAAN
ALSLYLRDEAGMPLIVSAERLPADTSALEGLAGASKITAPVERPDYRAVLTRIDQATARLMLAQNDLKPRLDVSVEVSKD
LGPPGVGGPNRSLTDAIIGFRFSVPLENRAARGRVAEARAEIEALDQRSRFLRDQISIEVESIVISLNAAERLAKIADEE
RGLADRLAAAERRRFELGSGDFFLVNQREETANDARVRLIDAQARIASARAELAAATADRDALQLSR
>Mature_467_residues
MIGRLVVLLIALSPGAAFAQAAALTLDEVLQSSARSAPQIVEALAKVRQAEGKGISADGAFDTVFDIEGRSREAGYYDGS
TIETGVKRPFEENGGYYYGGYRSSRGSFPIYEDKSYTDRGGEVKVGALYALLRDRVIDERRTKRSIASTDIDVAKYEAEM
VAIGVQRRAVDAYQNWVAAGLKLRAYNELLQLAEQRRNAISRQVTLGARPTILLTENDQNLVRRRALVVRAEQDFANAAN
ALSLYLRDEAGMPLIVSAERLPADTSALEGLAGASKITAPVERPDYRAVLTRIDQATARLMLAQNDLKPRLDVSVEVSKD
LGPPGVGGPNRSLTDAIIGFRFSVPLENRAARGRVAEARAEIEALDQRSRFLRDQISIEVESIVISLNAAERLAKIADEE
RGLADRLAAAERRRFELGSGDFFLVNQREETANDARVRLIDAQARIASARAELAAATADRDALQLSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51036; Mature: 51036

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGRLVVLLIALSPGAAFAQAAALTLDEVLQSSARSAPQIVEALAKVRQAEGKGISADGA
CHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCC
FDTVFDIEGRSREAGYYDGSTIETGVKRPFEENGGYYYGGYRSSRGSFPIYEDKSYTDRG
CCEEEECCCCCCCCCCCCCCCCCHHHCCCHHHCCCEEECCEECCCCCCCCCCCCCCCCCC
GEVKVGALYALLRDRVIDERRTKRSIASTDIDVAKYEAEMVAIGVQRRAVDAYQNWVAAG
CCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEHHHHHHHHHHHHHHHHC
LKLRAYNELLQLAEQRRNAISRQVTLGARPTILLTENDQNLVRRRALVVRAEQDFANAAN
CHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEECCCHHHHHHHHHHEECHHHHHHHHH
ALSLYLRDEAGMPLIVSAERLPADTSALEGLAGASKITAPVERPDYRAVLTRIDQATARL
HEEEEEECCCCCCEEEEHHHCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
MLAQNDLKPRLDVSVEVSKDLGPPGVGGPNRSLTDAIIGFRFSVPLENRAARGRVAEARA
HHHHCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHCEEEECCCCCCHHCCHHHHHHH
EIEALDQRSRFLRDQISIEVESIVISLNAAERLAKIADEERGLADRLAAAERRRFELGSG
HHHHHHHHHHHHHHHHCEEEEHEEEEECHHHHHHHHHHHHCCHHHHHHHHHHHHEECCCC
DFFLVNQREETANDARVRLIDAQARIASARAELAAATADRDALQLSR
CEEEEECCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCHHCCCC
>Mature Secondary Structure
MIGRLVVLLIALSPGAAFAQAAALTLDEVLQSSARSAPQIVEALAKVRQAEGKGISADGA
CHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCC
FDTVFDIEGRSREAGYYDGSTIETGVKRPFEENGGYYYGGYRSSRGSFPIYEDKSYTDRG
CCEEEECCCCCCCCCCCCCCCCCHHHCCCHHHCCCEEECCEECCCCCCCCCCCCCCCCCC
GEVKVGALYALLRDRVIDERRTKRSIASTDIDVAKYEAEMVAIGVQRRAVDAYQNWVAAG
CCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEHHHHHHHHHHHHHHHHC
LKLRAYNELLQLAEQRRNAISRQVTLGARPTILLTENDQNLVRRRALVVRAEQDFANAAN
CHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEECCCHHHHHHHHHHEECHHHHHHHHH
ALSLYLRDEAGMPLIVSAERLPADTSALEGLAGASKITAPVERPDYRAVLTRIDQATARL
HEEEEEECCCCCCEEEEHHHCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
MLAQNDLKPRLDVSVEVSKDLGPPGVGGPNRSLTDAIIGFRFSVPLENRAARGRVAEARA
HHHHCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHCEEEECCCCCCHHCCHHHHHHH
EIEALDQRSRFLRDQISIEVESIVISLNAAERLAKIADEERGLADRLAAAERRRFELGSG
HHHHHHHHHHHHHHHHCEEEEHEEEEECHHHHHHHHHHHHCCHHHHHHHHHHHHEECCCC
DFFLVNQREETANDARVRLIDAQARIASARAELAAATADRDALQLSR
CEEEEECCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA