| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is cdsA [H]
Identifier: 78047029
GI number: 78047029
Start: 1656133
End: 1656960
Strand: Reverse
Name: cdsA [H]
Synonym: XCV1473
Alternate gene names: 78047029
Gene position: 1656960-1656133 (Counterclockwise)
Preceding gene: 78047030
Following gene: 78047028
Centisome position: 32.0
GC content: 67.63
Gene sequence:
>828_bases ATGACCAAGACTCGCGTGATTGCCGCGCTGATCATGGCGCCGCTCGCGATTTGCGCGATCGTGCTGCTGCCCACCCAATG GCTGGCAGCGCTGGCGGCGGTCCTGTTCCTGACCGGCCTGTGGGAGTGGCTCAAGCTCTCCGGGATCGACGACAGCCTGC CGCGCACCGTGCTTTTGACGCTCAACCTGCTGCTGATGGTGCTGATGGTGTGGGCCTCGGCCGGCTCGATGGTGCTGTTC CAGATTGCGTCGCTGGTCGGCGTGGCGTGGTGGCTGTTGGCGCTGCTGTGGCTGCGCTTTTTCACCTTCGGCGCCGATCA TGGCAACGGCCAGGCGCGCGCACTCAAGCTGGCCGCCGGCACCCTGGCGGTGCTGCCGGCATGGGCAGCGCTGGTGCTGC TGCATGCCAGCCCGGACAAGGGCAACCTGTGGTTGCTGACCGCGCTGACCATGGTGTGGGCGGCTGACTCCGGTGCCTAC TTCGCCGGCCGCGCGTTCGGCAAACACAAGCTGGCGCCGCGGGTCAGCCCCAACAAGACCATCGAAGGGTTGCTCGGAGG CCTGCTCGCCGGCATTGCGGTTGCCTGCGCGTTCGGCTGGCTGGCCGGGCTGACGCTGGCACATGTGCCGCAGCTGGTGC TGGTCTCCGCACTGGCGGTGCTGGCATCGGTGCTGGGCGACCTGTTCGAAAGCCTGCTCAAGCGCCACGCCGGCGCCAAG GACTCGGGCACGCTGATTCCGGGCCATGGCGGCGTGCTGGACCGCATCGATGGCGTGCTCGCTGCCCTGCCGGTGTTCGC ACTCGGCAAGGAAATTCTCGGATTCTAG
Upstream 100 bases:
>100_bases GCGTGCTGCAGCAAGCGCTGGACGACTTTGCCGGGCGTGAACGCCGCTTCGGCCTGACCAGCGCACAGATCGCCGACAAG GCGACGGAGAGCTCCTCCGC
Downstream 100 bases:
>100_bases GCATGGCTGGCTCCTCTCTCCGTCAGGTCGCCGTGTTCGGCGCCACCGGCTCGATCGGTGCATCGGCACTGGACGTGATC GCGCGTCACCCCGAGCGGCT
Product: phosphatidate cytidylyltransferase
Products: NA
Alternate protein names: CDP-DAG synthase; CDP-DG synthase; CDP-diacylglycerol synthase; CDS; CDP-diglyceride pyrophosphorylase; CDP-diglyceride synthase; CTP:phosphatidate cytidylyltransferase [H]
Number of amino acids: Translated: 275; Mature: 274
Protein sequence:
>275_residues MTKTRVIAALIMAPLAICAIVLLPTQWLAALAAVLFLTGLWEWLKLSGIDDSLPRTVLLTLNLLLMVLMVWASAGSMVLF QIASLVGVAWWLLALLWLRFFTFGADHGNGQARALKLAAGTLAVLPAWAALVLLHASPDKGNLWLLTALTMVWAADSGAY FAGRAFGKHKLAPRVSPNKTIEGLLGGLLAGIAVACAFGWLAGLTLAHVPQLVLVSALAVLASVLGDLFESLLKRHAGAK DSGTLIPGHGGVLDRIDGVLAALPVFALGKEILGF
Sequences:
>Translated_275_residues MTKTRVIAALIMAPLAICAIVLLPTQWLAALAAVLFLTGLWEWLKLSGIDDSLPRTVLLTLNLLLMVLMVWASAGSMVLF QIASLVGVAWWLLALLWLRFFTFGADHGNGQARALKLAAGTLAVLPAWAALVLLHASPDKGNLWLLTALTMVWAADSGAY FAGRAFGKHKLAPRVSPNKTIEGLLGGLLAGIAVACAFGWLAGLTLAHVPQLVLVSALAVLASVLGDLFESLLKRHAGAK DSGTLIPGHGGVLDRIDGVLAALPVFALGKEILGF >Mature_274_residues TKTRVIAALIMAPLAICAIVLLPTQWLAALAAVLFLTGLWEWLKLSGIDDSLPRTVLLTLNLLLMVLMVWASAGSMVLFQ IASLVGVAWWLLALLWLRFFTFGADHGNGQARALKLAAGTLAVLPAWAALVLLHASPDKGNLWLLTALTMVWAADSGAYF AGRAFGKHKLAPRVSPNKTIEGLLGGLLAGIAVACAFGWLAGLTLAHVPQLVLVSALAVLASVLGDLFESLLKRHAGAKD SGTLIPGHGGVLDRIDGVLAALPVFALGKEILGF
Specific function: Phospholipid biosynthesis. [C]
COG id: COG0575
COG function: function code I; CDP-diglyceride synthetase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDS family [H]
Homologues:
Organism=Escherichia coli, GI87081696, Length=277, Percent_Identity=42.5992779783394, Blast_Score=174, Evalue=5e-45, Organism=Escherichia coli, GI1787677, Length=113, Percent_Identity=41.5929203539823, Blast_Score=88, Evalue=5e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000374 [H]
Pfam domain/function: PF01148 CTP_transf_1 [H]
EC number: =2.7.7.41 [H]
Molecular weight: Translated: 28889; Mature: 28758
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: PS01315 CDS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKTRVIAALIMAPLAICAIVLLPTQWLAALAAVLFLTGLWEWLKLSGIDDSLPRTVLLT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH LNLLLMVLMVWASAGSMVLFQIASLVGVAWWLLALLWLRFFTFGADHGNGQARALKLAAG HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH TLAVLPAWAALVLLHASPDKGNLWLLTALTMVWAADSGAYFAGRAFGKHKLAPRVSPNKT HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCHH IEGLLGGLLAGIAVACAFGWLAGLTLAHVPQLVLVSALAVLASVLGDLFESLLKRHAGAK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DSGTLIPGHGGVLDRIDGVLAALPVFALGKEILGF CCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TKTRVIAALIMAPLAICAIVLLPTQWLAALAAVLFLTGLWEWLKLSGIDDSLPRTVLLT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH LNLLLMVLMVWASAGSMVLFQIASLVGVAWWLLALLWLRFFTFGADHGNGQARALKLAAG HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH TLAVLPAWAALVLLHASPDKGNLWLLTALTMVWAADSGAYFAGRAFGKHKLAPRVSPNKT HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCHH IEGLLGGLLAGIAVACAFGWLAGLTLAHVPQLVLVSALAVLASVLGDLFESLLKRHAGAK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DSGTLIPGHGGVLDRIDGVLAALPVFALGKEILGF CCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]