Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
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Accession | NC_007503 |
Length | 2,401,520 |
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The map label for this gene is 78044586
Identifier: 78044586
GI number: 78044586
Start: 1099095
End: 1099763
Strand: Direct
Name: 78044586
Synonym: CHY_1232
Alternate gene names: NA
Gene position: 1099095-1099763 (Clockwise)
Preceding gene: 78043653
Following gene: 78044792
Centisome position: 45.77
GC content: 44.69
Gene sequence:
>669_bases TTGATTGTTGCTGAAAGAAAACCGCTCGAAGAAATAATTAAGATGGTGGAAAAGCATGAAAGTATTTTAGTCTTGGGATG CGGCGGTTGCGTTACGGTATGTTTAGCCGGGGGTGAGAAAGAAGCAGAACAGCTCGCTACGACCCTGCGGCTTTACTTCC AAAAAGAAAACAAACCGTTTAAAACTATTACCACCACTATTACCCGGCAGTGCGATCCAGAATATGTTAAGTCCGTTGCG GAAGAAGTTGCCAAAGTCGATGCTGTTTTATCAACCGCTTGCGGTGTCGGAGTTCAATTTATGGCCGAGAACTATCCTGG TAAATGGGTTTATCCTGCTCTAAATACAAAGTTTGCTGGAGCAAATTTAGAGTTGGGAGTTTGGGGAGAAAGATGTGGCC TTTGCGGAGAATGTATTTTACACCTAACCGGTGGGGTATGTCCGGTAATCCGTTGTTCTAAGAGCTTGTTAAATGGCCCT TGTGGTGGCTCGCAGAACGGAAAATGCGAGGTTTCCAGTGAAATCGACTGTGCTTGGCAGTTGATTTATGACCGGTTAAA AAGTTTAAATAGCCTTGACCTAATCCTTAAGATTCAACCACCCAAAGATTGGTCTAAAGCCCGGGATGGTGGTCCCAGGA AAGTAATTAAGGAGGAGGTCCGGTTATGA
Upstream 100 bases:
>100_bases GAGCAACAATTGCTTTTTACGGCTTAAAGCCGGGAGATGTTGATAGTCTGAAAAACATCTTAAGTACGATTTAATTACCT GAGGAAAGGGTGACCAAACC
Downstream 100 bases:
>100_bases TAACGGAAAGCCGCCTGGAAAAATTATTTGCCGAAGGTCATTTTGTGGTTACGGCAGAAATTGGACCTCCCAAAAACAGT AACGGAGAAGTAGTACGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 222; Mature: 222
Protein sequence:
>222_residues MIVAERKPLEEIIKMVEKHESILVLGCGGCVTVCLAGGEKEAEQLATTLRLYFQKENKPFKTITTTITRQCDPEYVKSVA EEVAKVDAVLSTACGVGVQFMAENYPGKWVYPALNTKFAGANLELGVWGERCGLCGECILHLTGGVCPVIRCSKSLLNGP CGGSQNGKCEVSSEIDCAWQLIYDRLKSLNSLDLILKIQPPKDWSKARDGGPRKVIKEEVRL
Sequences:
>Translated_222_residues MIVAERKPLEEIIKMVEKHESILVLGCGGCVTVCLAGGEKEAEQLATTLRLYFQKENKPFKTITTTITRQCDPEYVKSVA EEVAKVDAVLSTACGVGVQFMAENYPGKWVYPALNTKFAGANLELGVWGERCGLCGECILHLTGGVCPVIRCSKSLLNGP CGGSQNGKCEVSSEIDCAWQLIYDRLKSLNSLDLILKIQPPKDWSKARDGGPRKVIKEEVRL >Mature_222_residues MIVAERKPLEEIIKMVEKHESILVLGCGGCVTVCLAGGEKEAEQLATTLRLYFQKENKPFKTITTTITRQCDPEYVKSVA EEVAKVDAVLSTACGVGVQFMAENYPGKWVYPALNTKFAGANLELGVWGERCGLCGECILHLTGGVCPVIRCSKSLLNGP CGGSQNGKCEVSSEIDCAWQLIYDRLKSLNSLDLILKIQPPKDWSKARDGGPRKVIKEEVRL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24293; Mature: 24293
Theoretical pI: Translated: 7.47; Mature: 7.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 5.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVAERKPLEEIIKMVEKHESILVLGCGGCVTVCLAGGEKEAEQLATTLRLYFQKENKPF CCCCCCCCHHHHHHHHHCCCCEEEEECCHHHHHEECCCCHHHHHHHHHHHHHHHCCCCCH KTITTTITRQCDPEYVKSVAEEVAKVDAVLSTACGVGVQFMAENYPGKWVYPALNTKFAG HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCEEECCCCCEECC ANLELGVWGERCGLCGECILHLTGGVCPVIRCSKSLLNGPCGGSQNGKCEVSSEIDCAWQ CCEEEECCHHHHCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHH LIYDRLKSLNSLDLILKIQPPKDWSKARDGGPRKVIKEEVRL HHHHHHHCCCCEEEEEEEECCCCHHHHCCCCHHHHHHHHHCC >Mature Secondary Structure MIVAERKPLEEIIKMVEKHESILVLGCGGCVTVCLAGGEKEAEQLATTLRLYFQKENKPF CCCCCCCCHHHHHHHHHCCCCEEEEECCHHHHHEECCCCHHHHHHHHHHHHHHHCCCCCH KTITTTITRQCDPEYVKSVAEEVAKVDAVLSTACGVGVQFMAENYPGKWVYPALNTKFAG HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCEEECCCCCEECC ANLELGVWGERCGLCGECILHLTGGVCPVIRCSKSLLNGPCGGSQNGKCEVSSEIDCAWQ CCEEEECCHHHHCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHH LIYDRLKSLNSLDLILKIQPPKDWSKARDGGPRKVIKEEVRL HHHHHHHCCCCEEEEEEEECCCCHHHHCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA