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The map label for this gene is 78043653

Identifier: 78043653

GI number: 78043653

Start: 1098709

End: 1099068

Strand: Direct

Name: 78043653

Synonym: CHY_1231

Alternate gene names: NA

Gene position: 1098709-1099068 (Clockwise)

Preceding gene: 78043298

Following gene: 78044586

Centisome position: 45.75

GC content: 36.11

Gene sequence:

>360_bases
ATGACGGCTAAAATTTTAATTTATCAGTGTTCTTACTGTTCCTATTTAACTTTCGATTTATTAAGTCAATACAAAATTTC
TTTACCGGATAACATTGTTCTTACCGATCTCCCCTGTACCGGCACCATATCAGTAAATATGTTATTAGAAGCGGTGGAGA
ATGGTTTTGAAAAGGTATTTGTTTTAGGCGGAACCGGTAATGATTGCCGCTTTTTAAAAGGTAGTCAAAGGGCACAAAAA
CGAGTAGAAGAGGCGGTCAAGATTTTAAAGGAAATCGGTTATGACAGAGCAACAATTGCTTTTTACGGCTTAAAGCCGGG
AGATGTTGATAGTCTGAAAAACATCTTAAGTACGATTTAA

Upstream 100 bases:

>100_bases
TATGTGCTTCCGAATGTCCCAACAAAGCAATTGTTCAGAACAATCGTCCCCATCACGGGGTATTGGCTGAAATAAGGGTA
TTAGCAGGGGAGGGTAAATG

Downstream 100 bases:

>100_bases
TTACCTGAGGAAAGGGTGACCAAACCTTGATTGTTGCTGAAAGAAAACCGCTCGAAGAAATAATTAAGATGGTGGAAAAG
CATGAAAGTATTTTAGTCTT

Product: putative hydrogenase, methyl-violgen-reducing type subunit delta

Products: NA

Alternate protein names: Hydrogenase Methyl-Violgen-Reducing Type Subunit Delta

Number of amino acids: Translated: 119; Mature: 118

Protein sequence:

>119_residues
MTAKILIYQCSYCSYLTFDLLSQYKISLPDNIVLTDLPCTGTISVNMLLEAVENGFEKVFVLGGTGNDCRFLKGSQRAQK
RVEEAVKILKEIGYDRATIAFYGLKPGDVDSLKNILSTI

Sequences:

>Translated_119_residues
MTAKILIYQCSYCSYLTFDLLSQYKISLPDNIVLTDLPCTGTISVNMLLEAVENGFEKVFVLGGTGNDCRFLKGSQRAQK
RVEEAVKILKEIGYDRATIAFYGLKPGDVDSLKNILSTI
>Mature_118_residues
TAKILIYQCSYCSYLTFDLLSQYKISLPDNIVLTDLPCTGTISVNMLLEAVENGFEKVFVLGGTGNDCRFLKGSQRAQKR
VEEAVKILKEIGYDRATIAFYGLKPGDVDSLKNILSTI

Specific function: Unknown

COG id: COG1908

COG function: function code C; Coenzyme F420-reducing hydrogenase, delta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13209; Mature: 13077

Theoretical pI: Translated: 6.47; Mature: 6.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAKILIYQCSYCSYLTFDLLSQYKISLPDNIVLTDLPCTGTISVNMLLEAVENGFEKVF
CCCEEEEEECCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCEEEE
VLGGTGNDCRFLKGSQRAQKRVEEAVKILKEIGYDRATIAFYGLKPGDVDSLKNILSTI
EECCCCCCCEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHCC
>Mature Secondary Structure 
TAKILIYQCSYCSYLTFDLLSQYKISLPDNIVLTDLPCTGTISVNMLLEAVENGFEKVF
CCEEEEEECCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCEEEE
VLGGTGNDCRFLKGSQRAQKRVEEAVKILKEIGYDRATIAFYGLKPGDVDSLKNILSTI
EECCCCCCCEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA