Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
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Accession | NC_007503 |
Length | 2,401,520 |
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The map label for this gene is 78044138
Identifier: 78044138
GI number: 78044138
Start: 1127774
End: 1128127
Strand: Direct
Name: 78044138
Synonym: CHY_1266
Alternate gene names: NA
Gene position: 1127774-1128127 (Clockwise)
Preceding gene: 78044019
Following gene: 78044867
Centisome position: 46.96
GC content: 37.85
Gene sequence:
>354_bases ATGAATAGGCTTAAGCTTGTGTTTCATATTAACGAACCTGATAAATGGCAAAGGGTAATAATGAATATCAATAATTTTTT AAACGATGTGGGCCAAGGAAATGCTGACATCGAAGTAGTAGCTAATGGAGAAGCAGTTTCTGCCTTCAAAAGCAATGGTC AAACAAATAAAATGCTAATAGAACAAATGCAGAAGCTAGCTGAAATAGGGGTAAACTTTGTTGCTTGCCAGAATGCTCTT AAGGCTCAATCGATTGCTAAAGAGAGTTTGCCCGAATTTGTAACAGTTGTACCGGCCGGCATAACAGAAATTGCCAGGAA GCAAACAGAAGGATTTGCGTACATTAAACCATAA
Upstream 100 bases:
>100_bases ACTTTTAAGGAAAATCTTGAAAATTAATCAAACTAGTTTAGGAGGATTCGCTGTAAAAAAAATCATAACTTTAATTTATG AAAGTTGAGGTGTTAAACCG
Downstream 100 bases:
>100_bases TTAGTTTAGCTAAATAAGAGAGGAGTATGCAGCATGGTGGAAATTGTAGATTCTCATACCCATGTTTCGTTACTTCCTTA CGAGGGACTCGAAAACATGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 117; Mature: 117
Protein sequence:
>117_residues MNRLKLVFHINEPDKWQRVIMNINNFLNDVGQGNADIEVVANGEAVSAFKSNGQTNKMLIEQMQKLAEIGVNFVACQNAL KAQSIAKESLPEFVTVVPAGITEIARKQTEGFAYIKP
Sequences:
>Translated_117_residues MNRLKLVFHINEPDKWQRVIMNINNFLNDVGQGNADIEVVANGEAVSAFKSNGQTNKMLIEQMQKLAEIGVNFVACQNAL KAQSIAKESLPEFVTVVPAGITEIARKQTEGFAYIKP >Mature_117_residues MNRLKLVFHINEPDKWQRVIMNINNFLNDVGQGNADIEVVANGEAVSAFKSNGQTNKMLIEQMQKLAEIGVNFVACQNAL KAQSIAKESLPEFVTVVPAGITEIARKQTEGFAYIKP
Specific function: Unknown
COG id: COG1416
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12947; Mature: 12947
Theoretical pI: Translated: 7.37; Mature: 7.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRLKLVFHINEPDKWQRVIMNINNFLNDVGQGNADIEVVANGEAVSAFKSNGQTNKMLI CCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHCCCCHHHHHH EQMQKLAEIGVNFVACQNALKAQSIAKESLPEFVTVVPAGITEIARKQTEGFAYIKP HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEECC >Mature Secondary Structure MNRLKLVFHINEPDKWQRVIMNINNFLNDVGQGNADIEVVANGEAVSAFKSNGQTNKMLI CCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHCCCCHHHHHH EQMQKLAEIGVNFVACQNALKAQSIAKESLPEFVTVVPAGITEIARKQTEGFAYIKP HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA