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The map label for this gene is yjjV [C]

Identifier: 78044867

GI number: 78044867

Start: 1128161

End: 1128922

Strand: Direct

Name: yjjV [C]

Synonym: CHY_1267

Alternate gene names: 78044867

Gene position: 1128161-1128922 (Clockwise)

Preceding gene: 78044138

Following gene: 78045073

Centisome position: 46.98

GC content: 44.09

Gene sequence:

>762_bases
ATGGTGGAAATTGTAGATTCTCATACCCATGTTTCGTTACTTCCTTACGAGGGACTCGAAAACATGGCCCTGGCCGGAGT
AAAAAAAATTATTGGCTGTTCCTTATTTTTTGGAGCTCAGCATGCGGAGACACTTTTTGATCATTTTCACCAGATGTTAA
CTCTTTCGCGGACAAATGCTGAGAAAAACGGCATCAAGCTTTTTGTTGCTGTTGGTATTCATCCGATGGGAATTCCGAAA
GATTGGCCCAGAGTAATTGAAGCATTACCCAACTGGTTGAGAATGGACGGGGTTATCGGTTTAGGAGAAATCGGCCTGCA
TGAGGGTAGCCGGTTGGAACAGGATGTCCTCCGCGAGCAGTTAATTATCGCTAAGGAATTCCAGTTGCCAGTGATCATTC
ATACTCCGCCGCAGAAGAGGATGGAAATAACCAATGAAACGCTTGAAATTGCTGCTTCCGTCGGTATAAAACCAGAAAAA
GTGATTATTGATCACGCTAATGTAGATATTCTTGATTTAATCGAGGGATTTGGGGCTGTTCCCGGACTTACCATCCGGTC
CGATGGAATTACTCCGCAGATACTCCTCCACAATTTAGAACGTTTCCAACGGGGGGTTCTTAACAGTGATTATAGTAACC
TCAAGCCCAACGATCCCTTGAGTGTTCCAAAAGCTGTCCAGTACCTGAAACTAAACAAGGCATCGCCCGAAGTTGTTGCC
CGAATTGCAAGGTATAATGCTGAAAAATTGTTTGGCATTTAA

Upstream 100 bases:

>100_bases
TGTACCGGCCGGCATAACAGAAATTGCCAGGAAGCAAACAGAAGGATTTGCGTACATTAAACCATAATTAGTTTAGCTAA
ATAAGAGAGGAGTATGCAGC

Downstream 100 bases:

>100_bases
TTTTACAAATGGAAATATCCTGTGTTGTATGTTACTTTTCTTAAAGAAGTGCAAGTATAAACCCTGCTGTTATGGCAGGG
TATTTATTTTAGTTAGTTTT

Product: TatD family hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MVEIVDSHTHVSLLPYEGLENMALAGVKKIIGCSLFFGAQHAETLFDHFHQMLTLSRTNAEKNGIKLFVAVGIHPMGIPK
DWPRVIEALPNWLRMDGVIGLGEIGLHEGSRLEQDVLREQLIIAKEFQLPVIIHTPPQKRMEITNETLEIAASVGIKPEK
VIIDHANVDILDLIEGFGAVPGLTIRSDGITPQILLHNLERFQRGVLNSDYSNLKPNDPLSVPKAVQYLKLNKASPEVVA
RIARYNAEKLFGI

Sequences:

>Translated_253_residues
MVEIVDSHTHVSLLPYEGLENMALAGVKKIIGCSLFFGAQHAETLFDHFHQMLTLSRTNAEKNGIKLFVAVGIHPMGIPK
DWPRVIEALPNWLRMDGVIGLGEIGLHEGSRLEQDVLREQLIIAKEFQLPVIIHTPPQKRMEITNETLEIAASVGIKPEK
VIIDHANVDILDLIEGFGAVPGLTIRSDGITPQILLHNLERFQRGVLNSDYSNLKPNDPLSVPKAVQYLKLNKASPEVVA
RIARYNAEKLFGI
>Mature_253_residues
MVEIVDSHTHVSLLPYEGLENMALAGVKKIIGCSLFFGAQHAETLFDHFHQMLTLSRTNAEKNGIKLFVAVGIHPMGIPK
DWPRVIEALPNWLRMDGVIGLGEIGLHEGSRLEQDVLREQLIIAKEFQLPVIIHTPPQKRMEITNETLEIAASVGIKPEK
VIIDHANVDILDLIEGFGAVPGLTIRSDGITPQILLHNLERFQRGVLNSDYSNLKPNDPLSVPKAVQYLKLNKASPEVVA
RIARYNAEKLFGI

Specific function: Unknown

COG id: COG1099

COG function: function code R; Predicted metal-dependent hydrolases with the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tatD DNase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015992
- InterPro:   IPR001130
- InterPro:   IPR018228
- InterPro:   IPR012022 [H]

Pfam domain/function: PF01026 TatD_DNase [H]

EC number: 3.1.21.- [C]

Molecular weight: Translated: 28108; Mature: 28108

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEIVDSHTHVSLLPYEGLENMALAGVKKIIGCSLFFGAQHAETLFDHFHQMLTLSRTNA
CEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC
EKNGIKLFVAVGIHPMGIPKDWPRVIEALPNWLRMDGVIGLGEIGLHEGSRLEQDVLREQ
CCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCEECCCCCCCCCCHHHHHHHHHH
LIIAKEFQLPVIIHTPPQKRMEITNETLEIAASVGIKPEKVIIDHANVDILDLIEGFGAV
HHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCCC
PGLTIRSDGITPQILLHNLERFQRGVLNSDYSNLKPNDPLSVPKAVQYLKLNKASPEVVA
CCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHH
RIARYNAEKLFGI
HHHHHCHHHHCCC
>Mature Secondary Structure
MVEIVDSHTHVSLLPYEGLENMALAGVKKIIGCSLFFGAQHAETLFDHFHQMLTLSRTNA
CEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC
EKNGIKLFVAVGIHPMGIPKDWPRVIEALPNWLRMDGVIGLGEIGLHEGSRLEQDVLREQ
CCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCEECCCCCCCCCCHHHHHHHHHH
LIIAKEFQLPVIIHTPPQKRMEITNETLEIAASVGIKPEKVIIDHANVDILDLIEGFGAV
HHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCCC
PGLTIRSDGITPQILLHNLERFQRGVLNSDYSNLKPNDPLSVPKAVQYLKLNKASPEVVA
CCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHH
RIARYNAEKLFGI
HHHHHCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]