Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
---|---|
Accession | NC_007503 |
Length | 2,401,520 |
Click here to switch to the map view.
The map label for this gene is thiE [H]
Identifier: 78044019
GI number: 78044019
Start: 1126918
End: 1127565
Strand: Direct
Name: thiE [H]
Synonym: CHY_1265
Alternate gene names: 78044019
Gene position: 1126918-1127565 (Clockwise)
Preceding gene: 78043264
Following gene: 78044138
Centisome position: 46.93
GC content: 37.5
Gene sequence:
>648_bases TTGGAAGATTATAATATTTACTGCATAACTGCTGAGAAGTTTTCTCGTGGTAGAGAAAATCTTAAAGTTGTTTCTGAGAT GCTAAAAGCTGGAATAAGGATAATTCAGTATCGAGAGAAATATAAGTCACTGAAGGAAAAATATTATGAATGCCTCAAAA TAAGAGAACTGACAAGACAATATGGGGCTATTTTGATTGTAAATGACCATGTGGATTTGTGTCAAATGGTTGACGCGGAT GGGGTTCATCTTGGCCAAGACGATTATCCGGTTAAAGAGGCTCGGAGGATTTTAGGGGATGAATATATAATTGGAGTTTC TACTCATTCTCCCGAACAGCTGAAAAAAGCAGCAAAGGAAGGAGCTGATTATGCAGGTGTTGGACCGCTTTTTGCCACGA ATACTAAAGATAATGCAATACCCCCGGTTGGACTGGAATATCTAAAATGGGCAGTTGCAAACTCAAGTATACCCTTTGTT GCTATAGGTGGGATAAAAGAATATAACATTCAGGAGGTTCTCGACTTGGGATCCAAGTGTATAGCTCTTGTTACAGAGAT TGTTGGGGCTGAGGATATTAAAGATAAAATTGATAGACTAAATAAGATTTTAGAAAGATATAGGGTTAGTAACAAAGCCT TCGATTAA
Upstream 100 bases:
>100_bases AAACCTTATGCTCCTAAAGTAACGGCCGTTGCTGCAATTCAGGCCGATGAGGTGTTAAGGATGGTGGTGGAGGATGAGTA AGCTGGAAAAGTTAAGACTT
Downstream 100 bases:
>100_bases AGAGACGGGTATTAGTCCTAACGTTAATTGAAAAATACCGATATCTCTCCTTCTAATAATTTTCATAAGATAAATTAATT GGACAAGAAAATTTTTCTAT
Product: thiamine-phosphate pyrophosphorylase
Products: NA
Alternate protein names: TMP pyrophosphorylase; TMP-PPase; Thiamine-phosphate synthase [H]
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MEDYNIYCITAEKFSRGRENLKVVSEMLKAGIRIIQYREKYKSLKEKYYECLKIRELTRQYGAILIVNDHVDLCQMVDAD GVHLGQDDYPVKEARRILGDEYIIGVSTHSPEQLKKAAKEGADYAGVGPLFATNTKDNAIPPVGLEYLKWAVANSSIPFV AIGGIKEYNIQEVLDLGSKCIALVTEIVGAEDIKDKIDRLNKILERYRVSNKAFD
Sequences:
>Translated_215_residues MEDYNIYCITAEKFSRGRENLKVVSEMLKAGIRIIQYREKYKSLKEKYYECLKIRELTRQYGAILIVNDHVDLCQMVDAD GVHLGQDDYPVKEARRILGDEYIIGVSTHSPEQLKKAAKEGADYAGVGPLFATNTKDNAIPPVGLEYLKWAVANSSIPFV AIGGIKEYNIQEVLDLGSKCIALVTEIVGAEDIKDKIDRLNKILERYRVSNKAFD >Mature_215_residues MEDYNIYCITAEKFSRGRENLKVVSEMLKAGIRIIQYREKYKSLKEKYYECLKIRELTRQYGAILIVNDHVDLCQMVDAD GVHLGQDDYPVKEARRILGDEYIIGVSTHSPEQLKKAAKEGADYAGVGPLFATNTKDNAIPPVGLEYLKWAVANSSIPFV AIGGIKEYNIQEVLDLGSKCIALVTEIVGAEDIKDKIDRLNKILERYRVSNKAFD
Specific function: Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) [H]
COG id: COG0352
COG function: function code H; Thiamine monophosphate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TMP-PPase family [H]
Homologues:
Organism=Escherichia coli, GI1790426, Length=186, Percent_Identity=32.258064516129, Blast_Score=82, Evalue=3e-17, Organism=Saccharomyces cerevisiae, GI6325042, Length=232, Percent_Identity=34.051724137931, Blast_Score=116, Evalue=3e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR022998 - InterPro: IPR003733 [H]
Pfam domain/function: PF02581 TMP-TENI [H]
EC number: =2.5.1.3 [H]
Molecular weight: Translated: 24296; Mature: 24296
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEDYNIYCITAEKFSRGRENLKVVSEMLKAGIRIIQYREKYKSLKEKYYECLKIRELTRQ CCCCEEEEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YGAILIVNDHVDLCQMVDADGVHLGQDDYPVKEARRILGDEYIIGVSTHSPEQLKKAAKE HCEEEEEECCHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCHHHHHHHHHC GADYAGVGPLFATNTKDNAIPPVGLEYLKWAVANSSIPFVAIGGIKEYNIQEVLDLGSKC CCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHCCHHH IALVTEIVGAEDIKDKIDRLNKILERYRVSNKAFD HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MEDYNIYCITAEKFSRGRENLKVVSEMLKAGIRIIQYREKYKSLKEKYYECLKIRELTRQ CCCCEEEEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YGAILIVNDHVDLCQMVDADGVHLGQDDYPVKEARRILGDEYIIGVSTHSPEQLKKAAKE HCEEEEEECCHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCHHHHHHHHHC GADYAGVGPLFATNTKDNAIPPVGLEYLKWAVANSSIPFVAIGGIKEYNIQEVLDLGSKC CCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHCCHHH IALVTEIVGAEDIKDKIDRLNKILERYRVSNKAFD HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA