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The map label for this gene is fliP [H]

Identifier: 78043022

GI number: 78043022

Start: 887013

End: 887777

Strand: Direct

Name: fliP [H]

Synonym: CHY_1005

Alternate gene names: 78043022

Gene position: 887013-887777 (Clockwise)

Preceding gene: 78042737

Following gene: 78043118

Centisome position: 36.94

GC content: 43.14

Gene sequence:

>765_bases
GTGGCGGCAAAAAATAAAAAGCTTTTAATAACGGGAATTTTATTGATATTAACTCTGGGGGTAAGTTCATTAGCGCTTGC
GGAACCGCTTACCATACCCAATATCCAGCTTAATATTAACGGGCAGGGTTCGCCCCAGGAAGTGGTTAACTCCGTCAAGC
TTTTGGTGCTGTTAACCGTTTTAGCTTTGGTACCTGCCTTTTTACTTTTGATGACTTCCTTTACCCGCATTGTGGTGGTT
TTATCGCTGTTAAGGAATGCCATGGGTACCCAGCAAGCGCCACCCAATCAGGTTTTAATTGGCCTTGCTTTGTTTTTAAC
CATTTTTATCATGTCGCCGGTAATTAATAAAATTAACCAGGATGCCATCCAACCCTACTTAAATAATCAAATTACCCAGG
AGCAGGCTATCCGGGCGGCTGAAGCGCCGCTGAAGGATTTCATGCTGAAACAAACCCGGGAAAAAGACCTGGCCCTTTTT
ATTGAATTGGCCAAATTGCCGCGGCCGCAAACCAAAGACGACGTACCTTTTACCGTAGTGGTTCCGGCTTTTATCATCAG
CGAACTAAAAACGGCATTTCAGATGGGATTTATGTTGTTTCTACCGTTTTTGATTATTGACATGGTTGTTGCCAGTATTT
TAATGTCCATGGGCATGTTCATGATTCCGCCGATGCTCGTAGCTTTACCCTTTAAACTTTTACTTTTTGTTCTTGCCGAT
GGTTGGTACCTGGTGGTCAAGAGTTTGGTAAGCAGTTTTTCTTAA

Upstream 100 bases:

>100_bases
GATACCTTCGAGAATCCACCGGCGGAAATACCGGGATACGGTAATGTCTTTGAGAGCAGGCTAAATCAAAAAATTTCTGA
AGTTGTGGGGCAGATTAAAA

Downstream 100 bases:

>100_bases
AGCGGGAGAGAAGGGAAAAAATGGCTTCGCTCTATTTCATCCATTTGGCCCAAAAAAGCTTTACCGTTTTGAGCTTGCTG
GTAGGACCACCGCTTATTGT

Product: flagellar biosynthesis protein FliP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 253

Protein sequence:

>254_residues
MAAKNKKLLITGILLILTLGVSSLALAEPLTIPNIQLNINGQGSPQEVVNSVKLLVLLTVLALVPAFLLLMTSFTRIVVV
LSLLRNAMGTQQAPPNQVLIGLALFLTIFIMSPVINKINQDAIQPYLNNQITQEQAIRAAEAPLKDFMLKQTREKDLALF
IELAKLPRPQTKDDVPFTVVVPAFIISELKTAFQMGFMLFLPFLIIDMVVASILMSMGMFMIPPMLVALPFKLLLFVLAD
GWYLVVKSLVSSFS

Sequences:

>Translated_254_residues
MAAKNKKLLITGILLILTLGVSSLALAEPLTIPNIQLNINGQGSPQEVVNSVKLLVLLTVLALVPAFLLLMTSFTRIVVV
LSLLRNAMGTQQAPPNQVLIGLALFLTIFIMSPVINKINQDAIQPYLNNQITQEQAIRAAEAPLKDFMLKQTREKDLALF
IELAKLPRPQTKDDVPFTVVVPAFIISELKTAFQMGFMLFLPFLIIDMVVASILMSMGMFMIPPMLVALPFKLLLFVLAD
GWYLVVKSLVSSFS
>Mature_253_residues
AAKNKKLLITGILLILTLGVSSLALAEPLTIPNIQLNINGQGSPQEVVNSVKLLVLLTVLALVPAFLLLMTSFTRIVVVL
SLLRNAMGTQQAPPNQVLIGLALFLTIFIMSPVINKINQDAIQPYLNNQITQEQAIRAAEAPLKDFMLKQTREKDLALFI
ELAKLPRPQTKDDVPFTVVVPAFIISELKTAFQMGFMLFLPFLIIDMVVASILMSMGMFMIPPMLVALPFKLLLFVLADG
WYLVVKSLVSSFS

Specific function: Plays a role in the flagellum-specific transport system [H]

COG id: COG1338

COG function: function code NU; Flagellar biosynthesis pathway, component FliP

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliP/mopC/spaP family [H]

Homologues:

Organism=Escherichia coli, GI1788259, Length=211, Percent_Identity=57.345971563981, Blast_Score=246, Evalue=1e-66,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005837
- InterPro:   IPR005838 [H]

Pfam domain/function: PF00813 FliP [H]

EC number: NA

Molecular weight: Translated: 27962; Mature: 27831

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: PS01060 FLIP_1 ; PS01061 FLIP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAKNKKLLITGILLILTLGVSSLALAEPLTIPNIQLNINGQGSPQEVVNSVKLLVLLTV
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHH
LALVPAFLLLMTSFTRIVVVLSLLRNAMGTQQAPPNQVLIGLALFLTIFIMSPVINKINQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
DAIQPYLNNQITQEQAIRAAEAPLKDFMLKQTREKDLALFIELAKLPRPQTKDDVPFTVV
HHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
VPAFIISELKTAFQMGFMLFLPFLIIDMVVASILMSMGMFMIPPMLVALPFKLLLFVLAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GWYLVVKSLVSSFS
CHHHHHHHHHHHCC
>Mature Secondary Structure 
AAKNKKLLITGILLILTLGVSSLALAEPLTIPNIQLNINGQGSPQEVVNSVKLLVLLTV
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHH
LALVPAFLLLMTSFTRIVVVLSLLRNAMGTQQAPPNQVLIGLALFLTIFIMSPVINKINQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
DAIQPYLNNQITQEQAIRAAEAPLKDFMLKQTREKDLALFIELAKLPRPQTKDDVPFTVV
HHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
VPAFIISELKTAFQMGFMLFLPFLIIDMVVASILMSMGMFMIPPMLVALPFKLLLFVLAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GWYLVVKSLVSSFS
CHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1597417; 9384377 [H]