Click here to switch to the map view.

The map label for this gene is 78042737

Identifier: 78042737

GI number: 78042737

Start: 886652

End: 887029

Strand: Direct

Name: 78042737

Synonym: CHY_1004

Alternate gene names: NA

Gene position: 886652-887029 (Clockwise)

Preceding gene: 78043764

Following gene: 78043022

Centisome position: 36.92

GC content: 42.06

Gene sequence:

>378_bases
ATGAAGATACCGGGAAAGAGGCGAAAAAAATTGGGTAGTTATTTTGTGCAAATTTTTTGGTCGTTTTTTGTACTTGTTTT
GCTTCTGGCCGGTTTGTTCCTCCTTGCCCGGTACCTGAAAAACTTCCGCATCGGTTTCAAAAGCCGGTATATCGAGATTA
TCGACCGTTTACCCCTTTCCCCCAAAGCGGGCTTAGTGCTTTTAAAAGTCAATGATAAATATTATTTTGCGGGGTACGGT
GAAGATAACGTTTCGTTACTGGATACCTTCGAGAATCCACCGGCGGAAATACCGGGATACGGTAATGTCTTTGAGAGCAG
GCTAAATCAAAAAATTTCTGAAGTTGTGGGGCAGATTAAAAGTGGCGGCAAAAAATAA

Upstream 100 bases:

>100_bases
GGCGATTTAATCGACCTTTTTATTGACGGTCGGCGGTTTGCTGTTGGAGAAGTGGTGGTGATTAATGAAATGTACGGAGT
GAGGATCACCGGCTATTCTG

Downstream 100 bases:

>100_bases
AAAGCTTTTAATAACGGGAATTTTATTGATATTAACTCTGGGGGTAAGTTCATTAGCGCTTGCGGAACCGCTTACCATAC
CCAATATCCAGCTTAATATT

Product: putative flagellar protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MKIPGKRRKKLGSYFVQIFWSFFVLVLLLAGLFLLARYLKNFRIGFKSRYIEIIDRLPLSPKAGLVLLKVNDKYYFAGYG
EDNVSLLDTFENPPAEIPGYGNVFESRLNQKISEVVGQIKSGGKK

Sequences:

>Translated_125_residues
MKIPGKRRKKLGSYFVQIFWSFFVLVLLLAGLFLLARYLKNFRIGFKSRYIEIIDRLPLSPKAGLVLLKVNDKYYFAGYG
EDNVSLLDTFENPPAEIPGYGNVFESRLNQKISEVVGQIKSGGKK
>Mature_125_residues
MKIPGKRRKKLGSYFVQIFWSFFVLVLLLAGLFLLARYLKNFRIGFKSRYIEIIDRLPLSPKAGLVLLKVNDKYYFAGYG
EDNVSLLDTFENPPAEIPGYGNVFESRLNQKISEVVGQIKSGGKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14268; Mature: 14268

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIPGKRRKKLGSYFVQIFWSFFVLVLLLAGLFLLARYLKNFRIGFKSRYIEIIDRLPLS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCC
PKAGLVLLKVNDKYYFAGYGEDNVSLLDTFENPPAEIPGYGNVFESRLNQKISEVVGQIK
CCCCEEEEEECCEEEEEEECCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
SGGKK
CCCCC
>Mature Secondary Structure
MKIPGKRRKKLGSYFVQIFWSFFVLVLLLAGLFLLARYLKNFRIGFKSRYIEIIDRLPLS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCC
PKAGLVLLKVNDKYYFAGYGEDNVSLLDTFENPPAEIPGYGNVFESRLNQKISEVVGQIK
CCCCEEEEEECCEEEEEEECCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
SGGKK
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA