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The map label for this gene is fliQ [H]

Identifier: 78043118

GI number: 78043118

Start: 887798

End: 888067

Strand: Direct

Name: fliQ [H]

Synonym: CHY_1006

Alternate gene names: 78043118

Gene position: 887798-888067 (Clockwise)

Preceding gene: 78043022

Following gene: 78044979

Centisome position: 36.97

GC content: 42.59

Gene sequence:

>270_bases
ATGGCTTCGCTCTATTTCATCCATTTGGCCCAAAAAAGCTTTACCGTTTTGAGCTTGCTGGTAGGACCACCGCTTATTGT
TTCGCTGGTGGTTGGCTTAATAGTGGGAATCTTGCAGGCGGCAACCCAGATTCAAGAGCAAACGCTAACCTTTGTTCCAA
AATTAATTGCCGTGTTTTTAACCCTTTTACTCTTAAGCGGCTGGATGCTAAATATTATGGTAGACTTTACCGGACAAATC
TTTCAGGAAATGGCTAAAGTTCGCTTTTAG

Upstream 100 bases:

>100_bases
TACCCTTTAAACTTTTACTTTTTGTTCTTGCCGATGGTTGGTACCTGGTGGTCAAGAGTTTGGTAAGCAGTTTTTCTTAA
AGCGGGAGAGAAGGGAAAAA

Downstream 100 bases:

>100_bases
GAGTTCAAGATACGATGACCCAGTGGCTTATTTTTCTTATAATTGCGGCAAGGCTGGCCGGCTTTTTTGGCATCTCGCCT
TTAATCATTCCGGTACGGGG

Product: flagellar biosynthetic protein FliQ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 89; Mature: 88

Protein sequence:

>89_residues
MASLYFIHLAQKSFTVLSLLVGPPLIVSLVVGLIVGILQAATQIQEQTLTFVPKLIAVFLTLLLLSGWMLNIMVDFTGQI
FQEMAKVRF

Sequences:

>Translated_89_residues
MASLYFIHLAQKSFTVLSLLVGPPLIVSLVVGLIVGILQAATQIQEQTLTFVPKLIAVFLTLLLLSGWMLNIMVDFTGQI
FQEMAKVRF
>Mature_88_residues
ASLYFIHLAQKSFTVLSLLVGPPLIVSLVVGLIVGILQAATQIQEQTLTFVPKLIAVFLTLLLLSGWMLNIMVDFTGQIF
QEMAKVRF

Specific function: Role in flagellar biosynthesis [H]

COG id: COG1987

COG function: function code NU; Flagellar biosynthesis pathway, component FliQ

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliQ/MopD/SpaQ family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002191
- InterPro:   IPR006305 [H]

Pfam domain/function: PF01313 Bac_export_3 [H]

EC number: NA

Molecular weight: Translated: 9850; Mature: 9719

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASLYFIHLAQKSFTVLSLLVGPPLIVSLVVGLIVGILQAATQIQEQTLTFVPKLIAVFL
CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLLLLSGWMLNIMVDFTGQIFQEMAKVRF
HHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ASLYFIHLAQKSFTVLSLLVGPPLIVSLVVGLIVGILQAATQIQEQTLTFVPKLIAVFL
CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLLLLSGWMLNIMVDFTGQIFQEMAKVRF
HHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1597417; 9384377 [H]