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The map label for this gene is ygbK [C]

Identifier: 78042917

GI number: 78042917

Start: 1121419

End: 1122717

Strand: Direct

Name: ygbK [C]

Synonym: CHY_1258

Alternate gene names: 78042917

Gene position: 1121419-1122717 (Clockwise)

Preceding gene: 78043980

Following gene: 78043939

Centisome position: 46.7

GC content: 33.8

Gene sequence:

>1299_bases
GTGAAACAAATTGCTATTATTGCCGATGATTTAACTGGGGCCTCAGATACCGGTGTTCAATTTACCCAAAAAGGACTAAG
AACCTTGGTCATCTTTGATATAAAAAACTTATTTGAAGATGCTAAAAATGTGAATGTAGTTGTAATTGATACTGACAGCC
GTTCTCTTACTTCTTCTGCTGCTTATCAAAAAATAAAAGAAGTTTCTCAAGTATTAAAACCTAAAGGATACAAGCTAATT
TATAAAAAAATAGATTCTACACTTCGTGGAAATATTGGTGCAGAAATAGACGCCATAATGGATGTTATTACTTTTGATTT
TGCAGCTATAGTGCCGGCTTATCCTAAAATGGGCCGAACCACAATTGAAGGGCAACATTTTTTACATGGAGTTCCGATTG
ATAAAACTGAAATCGCAAATGATCCTATATGCCCTGTCAAAGATTCCAATATAGTATCTTTATTATCGAGTCAATCAAAA
AGAAATATTGGCTTAGTTAACCTGCAAACAATACGATCAGGGATTGAAAATATAAAAGCCAAAGTTGATAATTTATTAAA
AAAAGATGTCCAACTAATAGTATTCGATTCTGAAACAAGTCAAGACTTAAAAATCGTAACCGAATATCTTTCTTCAAGCA
ACTATCAAATTCTCTGGGTTGGTTCAGCTGGGCTAGCAGAGTCTTTACTAGATGCACTTGAGTTTACCTTTAATGACATA
TCGCAATTTAAATTACTTTCAACAGAAAATCCGGTATTGCTTGTTATTGGAAGCATTTCAAAAATAACTCAGCAACAACT
TTCAATTATACTTAAACAACCTAACGTAACTTCGGTAAAACTGGACCCATTAAATGTTTTAAAAGATGAACAATACAATA
ATGAAATTTCTCGTTGCCTCGTTGAAATAAAATTAGCATTAAAAAAAGGATTTGATGTGGCTTTTCATGTCAATTCGTCA
CCTGAAATTGTGCAAAAGACACAAGAAATAGGAAAACTTCTTAATATTCCGCAAAACCAAATATCGAATAGAATTGCAGA
TGCTCTTGGCATCATTTCAAGCCAAGTTATTAAGGAAATTCCTCTGCAAGGACTTATTTTAACAGGAGGAGATACAGCAA
AATCAGTATGCAAACACCTTGGAGTTAGAGGTTTGAAGTTGATTAAAGAACTAGAACCAGGGGTCCCAATAAGCCAACTT
ATTGGCTTTGGTAATTTGTTGGCAATTACGAAAGCCGGTGCTTTTGGAACAGAAAGAACTCTTATTAATGCAGTACACTT
TTTGAAAGGAGATAGGTGA

Upstream 100 bases:

>100_bases
TCTAAAATGTTATATGTACTGCAATTTTTACTTTTCTCTAAAAAATAAAAAAATATAAAAACTGATAAAGAAAACTAGAG
AAAAAAGGAAGTGGTATAAT

Downstream 100 bases:

>100_bases
TATGTCAAGACCGGTAATCGGAATTACTATGGGAGATGCAGCAGGAGTAGGGCCAGAGATAATAATGAAGGCGCTACGCG
ATCCTGAAATTTATGCAATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 432; Mature: 432

Protein sequence:

>432_residues
MKQIAIIADDLTGASDTGVQFTQKGLRTLVIFDIKNLFEDAKNVNVVVIDTDSRSLTSSAAYQKIKEVSQVLKPKGYKLI
YKKIDSTLRGNIGAEIDAIMDVITFDFAAIVPAYPKMGRTTIEGQHFLHGVPIDKTEIANDPICPVKDSNIVSLLSSQSK
RNIGLVNLQTIRSGIENIKAKVDNLLKKDVQLIVFDSETSQDLKIVTEYLSSSNYQILWVGSAGLAESLLDALEFTFNDI
SQFKLLSTENPVLLVIGSISKITQQQLSIILKQPNVTSVKLDPLNVLKDEQYNNEISRCLVEIKLALKKGFDVAFHVNSS
PEIVQKTQEIGKLLNIPQNQISNRIADALGIISSQVIKEIPLQGLILTGGDTAKSVCKHLGVRGLKLIKELEPGVPISQL
IGFGNLLAITKAGAFGTERTLINAVHFLKGDR

Sequences:

>Translated_432_residues
MKQIAIIADDLTGASDTGVQFTQKGLRTLVIFDIKNLFEDAKNVNVVVIDTDSRSLTSSAAYQKIKEVSQVLKPKGYKLI
YKKIDSTLRGNIGAEIDAIMDVITFDFAAIVPAYPKMGRTTIEGQHFLHGVPIDKTEIANDPICPVKDSNIVSLLSSQSK
RNIGLVNLQTIRSGIENIKAKVDNLLKKDVQLIVFDSETSQDLKIVTEYLSSSNYQILWVGSAGLAESLLDALEFTFNDI
SQFKLLSTENPVLLVIGSISKITQQQLSIILKQPNVTSVKLDPLNVLKDEQYNNEISRCLVEIKLALKKGFDVAFHVNSS
PEIVQKTQEIGKLLNIPQNQISNRIADALGIISSQVIKEIPLQGLILTGGDTAKSVCKHLGVRGLKLIKELEPGVPISQL
IGFGNLLAITKAGAFGTERTLINAVHFLKGDR
>Mature_432_residues
MKQIAIIADDLTGASDTGVQFTQKGLRTLVIFDIKNLFEDAKNVNVVVIDTDSRSLTSSAAYQKIKEVSQVLKPKGYKLI
YKKIDSTLRGNIGAEIDAIMDVITFDFAAIVPAYPKMGRTTIEGQHFLHGVPIDKTEIANDPICPVKDSNIVSLLSSQSK
RNIGLVNLQTIRSGIENIKAKVDNLLKKDVQLIVFDSETSQDLKIVTEYLSSSNYQILWVGSAGLAESLLDALEFTFNDI
SQFKLLSTENPVLLVIGSISKITQQQLSIILKQPNVTSVKLDPLNVLKDEQYNNEISRCLVEIKLALKKGFDVAFHVNSS
PEIVQKTQEIGKLLNIPQNQISNRIADALGIISSQVIKEIPLQGLILTGGDTAKSVCKHLGVRGLKLIKELEPGVPISQL
IGFGNLLAITKAGAFGTERTLINAVHFLKGDR

Specific function: Unknown

COG id: COG3395

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ygbK [H]

Homologues:

Organism=Escherichia coli, GI1789093, Length=410, Percent_Identity=25.1219512195122, Blast_Score=110, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010737 [H]

Pfam domain/function: PF07005 DUF1537 [H]

EC number: NA

Molecular weight: Translated: 47273; Mature: 47273

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQIAIIADDLTGASDTGVQFTQKGLRTLVIFDIKNLFEDAKNVNVVVIDTDSRSLTSSA
CCEEEEEECCCCCCCCCCHHHHHHCCCEEEEHHHHHHHHHHCCCEEEEEECCCCHHHHHH
AYQKIKEVSQVLKPKGYKLIYKKIDSTLRGNIGAEIDAIMDVITFDFAAIVPAYPKMGRT
HHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCE
TIEGQHFLHGVPIDKTEIANDPICPVKDSNIVSLLSSQSKRNIGLVNLQTIRSGIENIKA
EECCCHHEECCCCCHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHH
KVDNLLKKDVQLIVFDSETSQDLKIVTEYLSSSNYQILWVGSAGLAESLLDALEFTFNDI
HHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHH
SQFKLLSTENPVLLVIGSISKITQQQLSIILKQPNVTSVKLDPLNVLKDEQYNNEISRCL
HHEEEECCCCCEEEEECCHHHHHHHHHHHHEECCCCCEEEECCHHHHCCCHHHHHHHHHH
VEIKLALKKGFDVAFHVNSSPEIVQKTQEIGKLLNIPQNQISNRIADALGIISSQVIKEI
HHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC
PLQGLILTGGDTAKSVCKHLGVRGLKLIKELEPGVPISQLIGFGNLLAITKAGAFGTERT
CCCEEEEECCCHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHCCCCCEEEEECCCCCCHHH
LINAVHFLKGDR
HHHHHHHHCCCC
>Mature Secondary Structure
MKQIAIIADDLTGASDTGVQFTQKGLRTLVIFDIKNLFEDAKNVNVVVIDTDSRSLTSSA
CCEEEEEECCCCCCCCCCHHHHHHCCCEEEEHHHHHHHHHHCCCEEEEEECCCCHHHHHH
AYQKIKEVSQVLKPKGYKLIYKKIDSTLRGNIGAEIDAIMDVITFDFAAIVPAYPKMGRT
HHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCE
TIEGQHFLHGVPIDKTEIANDPICPVKDSNIVSLLSSQSKRNIGLVNLQTIRSGIENIKA
EECCCHHEECCCCCHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHH
KVDNLLKKDVQLIVFDSETSQDLKIVTEYLSSSNYQILWVGSAGLAESLLDALEFTFNDI
HHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHH
SQFKLLSTENPVLLVIGSISKITQQQLSIILKQPNVTSVKLDPLNVLKDEQYNNEISRCL
HHEEEECCCCCEEEEECCHHHHHHHHHHHHEECCCCCEEEECCHHHHCCCHHHHHHHHHH
VEIKLALKKGFDVAFHVNSSPEIVQKTQEIGKLLNIPQNQISNRIADALGIISSQVIKEI
HHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC
PLQGLILTGGDTAKSVCKHLGVRGLKLIKELEPGVPISQLIGFGNLLAITKAGAFGTERT
CCCEEEEECCCHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHCCCCCEEEEECCCCCCHHH
LINAVHFLKGDR
HHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]