| Definition | Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_007494 |
| Length | 943,016 |
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The map label for this gene is 77465445
Identifier: 77465445
GI number: 77465445
Start: 513468
End: 514433
Strand: Reverse
Name: 77465445
Synonym: RSP_3443
Alternate gene names: NA
Gene position: 514433-513468 (Counterclockwise)
Preceding gene: 77465446
Following gene: 77465438
Centisome position: 54.55
GC content: 73.71
Gene sequence:
>966_bases ATGGAGCGCCCTCTGGACCACCACCTTCCCGCCTCGCCCGCGACCGTCTCGTGGGGCCATCTCGATCCCGCCGCCGCCCC CGTGCTGCAGCTCGCGCCGGGCGAGCGGGCGGTGATCGAGACCCTCTCGGGCGGCCCGCGCAATCTGCCGCCCGAGGGCC ACCCCTGCCGGGTGCTGGCCAGCCACCGCGCGGTGATGGAGGCGCAGGTGCCCCATCTCGGGCCCCACATGCTGACGGGG CCGGTCCATATCGCGGGGGCCGAGCCCGGCGACCGGCTGGTGGTCGAGATCGAGGAGATTACGCTCGCGCAGGACTGGGG CTGGAGCGCCATCGAGCCCGGCTTCGGGATCTTCCCCGACCTCGCGCCCGCCTACGAGAGCCTCGTCGTCCCCATCGACC GGGCGCGCCGCAGCGCGCGCCTGCCCTGGGGCCCCGAGGTGGCGCTGGCGCCCTTCTTCGGCATCCTCGCCGTGGCGCCG CCGCCCGAGGGCGGCCGGGTCAGCTCGGTTCCGCCCGGACCCTTCGGCGGCAATGTGGACAACCGCTTCTTCCGGCAGGG CGCGCGGATCTCCTTCCCGGTCTTCTGCGCGGGCGCGCTGTTCTTTGCGGGCGACGGTCATGCGCTGCAGGGCGACGGCG AGGTCTGCGACACCGCGCTCGAAACGGCACTGACCGGCCGCTTCCGCTTCACGCTCGAAAAGGGCACGGCGCCCGCCGCC CCCGAGATCGAGCTGGGCGATCTGATCGTGACCATGGGCTTTCACGAGACGCTCGACGGGGCCGCACGCGATGCGACCGC CCGGATGCTCGACTGGATCTGCGCGCAGACGGGCCTCACCCGCACCGAGGCCTGGCGGCACGCGAGCCTCTGCGCCGACC TGCGGATCACGCAGGCGGTGAACGGGCAGAAGGGCGTCCATTGCGTGCTCGATCGCCGCAGCCTGATCGGCGCCCGCCCC GCCTGA
Upstream 100 bases:
>100_bases ATACGGTCGGCGCTTCCGAGACGGTGATCCTCACCGAAACCGGCATCGAGGTCTTGTCGACCCTGCCCAGACAGATGAGG GTGCGCTGACCCTTCCGCCG
Downstream 100 bases:
>100_bases GCGGGAAGGGCGTGAGGCAGAGCGGGTGGATTGCCGGACGGGCGTCTTGGAACGCAAGCCACCCCCGGAAACCGCTCCGG GTCCGGCGCGATTCGGCGGC
Product: putative acetamidase/formamidase
Products: NA
Alternate protein names: Formamidase; Acetamidase/Formamidase Family Protein; Acetamidase; Amidase; Acetamidase/Formamidase Family; Transcriptional Regulator; AraC Family Transcriptional Regulator; Acetamidase/Formamidase Protein; Amidase-Related Protein; Amidae; Twin-Arginine Translocation Pathway Signal; Formamidase/Acetamidase; Transcriptional Regulatory Protein; Transcription Regulator AraC Family; Helix-Turn-Helix Domain-Containing Protein
Number of amino acids: Translated: 321; Mature: 321
Protein sequence:
>321_residues MERPLDHHLPASPATVSWGHLDPAAAPVLQLAPGERAVIETLSGGPRNLPPEGHPCRVLASHRAVMEAQVPHLGPHMLTG PVHIAGAEPGDRLVVEIEEITLAQDWGWSAIEPGFGIFPDLAPAYESLVVPIDRARRSARLPWGPEVALAPFFGILAVAP PPEGGRVSSVPPGPFGGNVDNRFFRQGARISFPVFCAGALFFAGDGHALQGDGEVCDTALETALTGRFRFTLEKGTAPAA PEIELGDLIVTMGFHETLDGAARDATARMLDWICAQTGLTRTEAWRHASLCADLRITQAVNGQKGVHCVLDRRSLIGARP A
Sequences:
>Translated_321_residues MERPLDHHLPASPATVSWGHLDPAAAPVLQLAPGERAVIETLSGGPRNLPPEGHPCRVLASHRAVMEAQVPHLGPHMLTG PVHIAGAEPGDRLVVEIEEITLAQDWGWSAIEPGFGIFPDLAPAYESLVVPIDRARRSARLPWGPEVALAPFFGILAVAP PPEGGRVSSVPPGPFGGNVDNRFFRQGARISFPVFCAGALFFAGDGHALQGDGEVCDTALETALTGRFRFTLEKGTAPAA PEIELGDLIVTMGFHETLDGAARDATARMLDWICAQTGLTRTEAWRHASLCADLRITQAVNGQKGVHCVLDRRSLIGARP A >Mature_321_residues MERPLDHHLPASPATVSWGHLDPAAAPVLQLAPGERAVIETLSGGPRNLPPEGHPCRVLASHRAVMEAQVPHLGPHMLTG PVHIAGAEPGDRLVVEIEEITLAQDWGWSAIEPGFGIFPDLAPAYESLVVPIDRARRSARLPWGPEVALAPFFGILAVAP PPEGGRVSSVPPGPFGGNVDNRFFRQGARISFPVFCAGALFFAGDGHALQGDGEVCDTALETALTGRFRFTLEKGTAPAA PEIELGDLIVTMGFHETLDGAARDATARMLDWICAQTGLTRTEAWRHASLCADLRITQAVNGQKGVHCVLDRRSLIGARP A
Specific function: Unknown
COG id: COG2421
COG function: function code C; Predicted acetamidase/formamidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34132; Mature: 34132
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERPLDHHLPASPATVSWGHLDPAAAPVLQLAPGERAVIETLSGGPRNLPPEGHPCRVLA CCCCCCCCCCCCCCEEECCCCCHHHCCEEEECCCCHHHHHHHCCCCCCCCCCCCCEEEHH SHRAVMEAQVPHLGPHMLTGPVHIAGAEPGDRLVVEIEEITLAQDWGWSAIEPGFGIFPD HHHHHHHHCCCCCCCCEEECCEEEECCCCCCEEEEEEEHEEEECCCCCCCCCCCCCCCCC LAPAYESLVVPIDRARRSARLPWGPEVALAPFFGILAVAPPPEGGRVSSVPPGPFGGNVD HHHHHHHEEEEHHHHHHHCCCCCCCCCHHHHHEEEEEECCCCCCCEECCCCCCCCCCCCC NRFFRQGARISFPVFCAGALFFAGDGHALQGDGEVCDTALETALTGRFRFTLEKGTAPAA HHHHHCCCCCCCHHEEEEEEEECCCCCEECCCCHHHHHHHHHHHCCEEEEEEECCCCCCC PEIELGDLIVTMGFHETLDGAARDATARMLDWICAQTGLTRTEAWRHASLCADLRITQAV CCEECCCEEEEECCHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEHHHHC NGQKGVHCVLDRRSLIGARPA CCCCCEEEEEECHHHCCCCCC >Mature Secondary Structure MERPLDHHLPASPATVSWGHLDPAAAPVLQLAPGERAVIETLSGGPRNLPPEGHPCRVLA CCCCCCCCCCCCCCEEECCCCCHHHCCEEEECCCCHHHHHHHCCCCCCCCCCCCCEEEHH SHRAVMEAQVPHLGPHMLTGPVHIAGAEPGDRLVVEIEEITLAQDWGWSAIEPGFGIFPD HHHHHHHHCCCCCCCCEEECCEEEECCCCCCEEEEEEEHEEEECCCCCCCCCCCCCCCCC LAPAYESLVVPIDRARRSARLPWGPEVALAPFFGILAVAPPPEGGRVSSVPPGPFGGNVD HHHHHHHEEEEHHHHHHHCCCCCCCCCHHHHHEEEEEECCCCCCCEECCCCCCCCCCCCC NRFFRQGARISFPVFCAGALFFAGDGHALQGDGEVCDTALETALTGRFRFTLEKGTAPAA HHHHHCCCCCCCHHEEEEEEEECCCCCEECCCCHHHHHHHHHHHCCEEEEEEECCCCCCC PEIELGDLIVTMGFHETLDGAARDATARMLDWICAQTGLTRTEAWRHASLCADLRITQAV CCEECCCEEEEECCHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEHHHHC NGQKGVHCVLDRRSLIGARPA CCCCCEEEEEECHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA