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The map label for this gene is ydiK [C]

Identifier: 77459939

GI number: 77459939

Start: 4201636

End: 4202697

Strand: Reverse

Name: ydiK [C]

Synonym: Pfl01_3717

Alternate gene names: 77459939

Gene position: 4202697-4201636 (Counterclockwise)

Preceding gene: 77459941

Following gene: 77459935

Centisome position: 65.28

GC content: 58.95

Gene sequence:

>1062_bases
ATGAACCAAAAGAGTCTGCAATTCAAATCCCTCACCGTGCTGTTGTTTCTGGTGACGGTCGCCTTTATCTGGATCCTGCT
GCCGTTCTACGGCGCGGTTTTCTGGGCGGTGATCCTCGGCATCCTGTTCGCACCGATGCAGCGCCAGTTGCAACTGAAAT
TCGGCTGGCAACGCAATCTCACATCCCTTTGTACCTTGAGCATCTGCCTGGTGATCGCGATCTTGCCGGTGATCGTCCTC
AGTGTGCTGCTGGTGCAGGAAGGGGCGACGCTCTACGACAATATCGAAAGCGGCAAGCTCGATATCGGCGCCTATCTGGC
GCAGTTCAAGCACAGCCTGCCGCCTTACTTTCAGCACCTGCTCGACCGCTTCGGCATGGGCGAGCTCAATGCCTTGCGCG
AGAAGATCGTCAAGGCCGCCATGCAGGGCAGTCAGGTGCTGGCAAGCCAGGCGTTCAGTTTCGGCCAGGGCACGTTCGAA
TTCGTGGTGAGTTTTTTCATCATGTTGTACCTGTTGTTTTTCTTCCTGCGCGACGGCGCCGAACTGGCGCGCAAGGTGCG
CACAGCGATACCGCTGGAGGAGCATCACAAGCGTCGCTTGCAGTTGAAATTCAATCGCGTGGTACGCGCCACGGTGAAGG
GCAATCTGCTGGTGGCGATCACGCAGGGTGCGCTGGGCGGGGCGATTTTCTGGTTTCTCGACATTCCCAGTGCGTTGCTC
TGGGCGGTATTGATGGCGTTTCTGTCGTTGCTACCGGCGGTGGGCGCGGGGATTGTCTGGGTGCCGGTCGCGGTTTACTT
CCTGCTCAGCGGGATGATCTGGCAGGGCGTGGTGCTGGGGCTGTTCGGGGTGTTCGTGATCGGTCTGGTGGACAACCTGC
TGCGCCCGATCCTGGTGGGCAAGGACACCCGGATGCCGGACTACATGATCCTGATCTCGACCCTGGGCGGATTGGCGGTG
TTCGGGCTGAACGGCTTTGTGATCGGGCCGCTGATCGCCGCGCTGTTCATGTCGAGCTGGGCGCTGTTCATCGAAAGCAA
ACCGAAAGTGCAATTGCCTTAA

Upstream 100 bases:

>100_bases
GATCTGGATCTATGCTCCATGAAGAAACAGGGCACTCGCGCTGACGCTGGCTGACTAAACGGGACGGGCGCGGGTGGCGC
CTGACTGACCTGGACCGGAC

Downstream 100 bases:

>100_bases
GCCTTGAACGGTCCGTTGAGCAGTTGCTGCGACAGCGCCTGAGCCGCCGGCAAGGATGTGAGCGGGCCGCTGACCGGCTC
GCCGTCGCGCACCAGATACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MNQKSLQFKSLTVLLFLVTVAFIWILLPFYGAVFWAVILGILFAPMQRQLQLKFGWQRNLTSLCTLSICLVIAILPVIVL
SVLLVQEGATLYDNIESGKLDIGAYLAQFKHSLPPYFQHLLDRFGMGELNALREKIVKAAMQGSQVLASQAFSFGQGTFE
FVVSFFIMLYLLFFFLRDGAELARKVRTAIPLEEHHKRRLQLKFNRVVRATVKGNLLVAITQGALGGAIFWFLDIPSALL
WAVLMAFLSLLPAVGAGIVWVPVAVYFLLSGMIWQGVVLGLFGVFVIGLVDNLLRPILVGKDTRMPDYMILISTLGGLAV
FGLNGFVIGPLIAALFMSSWALFIESKPKVQLP

Sequences:

>Translated_353_residues
MNQKSLQFKSLTVLLFLVTVAFIWILLPFYGAVFWAVILGILFAPMQRQLQLKFGWQRNLTSLCTLSICLVIAILPVIVL
SVLLVQEGATLYDNIESGKLDIGAYLAQFKHSLPPYFQHLLDRFGMGELNALREKIVKAAMQGSQVLASQAFSFGQGTFE
FVVSFFIMLYLLFFFLRDGAELARKVRTAIPLEEHHKRRLQLKFNRVVRATVKGNLLVAITQGALGGAIFWFLDIPSALL
WAVLMAFLSLLPAVGAGIVWVPVAVYFLLSGMIWQGVVLGLFGVFVIGLVDNLLRPILVGKDTRMPDYMILISTLGGLAV
FGLNGFVIGPLIAALFMSSWALFIESKPKVQLP
>Mature_353_residues
MNQKSLQFKSLTVLLFLVTVAFIWILLPFYGAVFWAVILGILFAPMQRQLQLKFGWQRNLTSLCTLSICLVIAILPVIVL
SVLLVQEGATLYDNIESGKLDIGAYLAQFKHSLPPYFQHLLDRFGMGELNALREKIVKAAMQGSQVLASQAFSFGQGTFE
FVVSFFIMLYLLFFFLRDGAELARKVRTAIPLEEHHKRRLQLKFNRVVRATVKGNLLVAITQGALGGAIFWFLDIPSALL
WAVLMAFLSLLPAVGAGIVWVPVAVYFLLSGMIWQGVVLGLFGVFVIGLVDNLLRPILVGKDTRMPDYMILISTLGGLAV
FGLNGFVIGPLIAALFMSSWALFIESKPKVQLP

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1787979, Length=342, Percent_Identity=28.0701754385965, Blast_Score=79, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 39173; Mature: 39173

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQKSLQFKSLTVLLFLVTVAFIWILLPFYGAVFWAVILGILFAPMQRQLQLKFGWQRNL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
TSLCTLSICLVIAILPVIVLSVLLVQEGATLYDNIESGKLDIGAYLAQFKHSLPPYFQHL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHH
LDRFGMGELNALREKIVKAAMQGSQVLASQAFSFGQGTFEFVVSFFIMLYLLFFFLRDGA
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCH
ELARKVRTAIPLEEHHKRRLQLKFNRVVRATVKGNLLVAITQGALGGAIFWFLDIPSALL
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHH
WAVLMAFLSLLPAVGAGIVWVPVAVYFLLSGMIWQGVVLGLFGVFVIGLVDNLLRPILVG
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KDTRMPDYMILISTLGGLAVFGLNGFVIGPLIAALFMSSWALFIESKPKVQLP
CCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MNQKSLQFKSLTVLLFLVTVAFIWILLPFYGAVFWAVILGILFAPMQRQLQLKFGWQRNL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
TSLCTLSICLVIAILPVIVLSVLLVQEGATLYDNIESGKLDIGAYLAQFKHSLPPYFQHL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHH
LDRFGMGELNALREKIVKAAMQGSQVLASQAFSFGQGTFEFVVSFFIMLYLLFFFLRDGA
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCH
ELARKVRTAIPLEEHHKRRLQLKFNRVVRATVKGNLLVAITQGALGGAIFWFLDIPSALL
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHH
WAVLMAFLSLLPAVGAGIVWVPVAVYFLLSGMIWQGVVLGLFGVFVIGLVDNLLRPILVG
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KDTRMPDYMILISTLGGLAVFGLNGFVIGPLIAALFMSSWALFIESKPKVQLP
CCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]