Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
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Accession | NC_007492 |
Length | 6,438,405 |
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The map label for this gene is 77458901
Identifier: 77458901
GI number: 77458901
Start: 3076396
End: 3076740
Strand: Direct
Name: 77458901
Synonym: Pfl01_2676
Alternate gene names: NA
Gene position: 3076396-3076740 (Clockwise)
Preceding gene: 77458900
Following gene: 77458902
Centisome position: 47.78
GC content: 61.74
Gene sequence:
>345_bases ATGAGCATCACCCAATTCAAGAACACCGCCACGTTGCAACTGGATGAGTCCAACCCGGTGGCCGTGCCGCTCGGCACGCC GGTGGCGATTGCCTCGACCACCAGCGTCGAGCGCGACGACGGCGTCGAAACCGGCGTCTGGGAATGCACCCCCGGTCGCT GGCGCCGGCAGATCACCGCTCAGGAGTTCTGCCATTTCATTTCCGGTCGCTGCACGTTCACCCCGGACGACGGCGGCGAA ACCCTGCACATACAAGGTGGCGACGCACTGATGTTGCCGGCCAATACGCTCGGAATCTGGGACATCGAAGAAACCGTGCG CAAGACCTATGTCCTGATTTTCTGA
Upstream 100 bases:
>100_bases GGCGACCGCGCCCTGGCGGCGCAAGCTTGCCAGCCAGGTCGCCGGGTTCATGGAAGGTTTCATGCACTAAACGTTTGTTT ACTACGAGACAGGTAACGCC
Downstream 100 bases:
>100_bases CGTTTTGATCCTTTTGATTGCCTGCCAACAACAATAGCCAATACAGGAATCGATCCATGATCCGAAAGACCCTCGCGCTC GCACCCTTGATGCTCGCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 114; Mature: 113
Protein sequence:
>114_residues MSITQFKNTATLQLDESNPVAVPLGTPVAIASTTSVERDDGVETGVWECTPGRWRRQITAQEFCHFISGRCTFTPDDGGE TLHIQGGDALMLPANTLGIWDIEETVRKTYVLIF
Sequences:
>Translated_114_residues MSITQFKNTATLQLDESNPVAVPLGTPVAIASTTSVERDDGVETGVWECTPGRWRRQITAQEFCHFISGRCTFTPDDGGE TLHIQGGDALMLPANTLGIWDIEETVRKTYVLIF >Mature_113_residues SITQFKNTATLQLDESNPVAVPLGTPVAIASTTSVERDDGVETGVWECTPGRWRRQITAQEFCHFISGRCTFTPDDGGET LHIQGGDALMLPANTLGIWDIEETVRKTYVLIF
Specific function: Unknown
COG id: COG3450
COG function: function code R; Predicted enzyme of the cupin superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12543; Mature: 12412
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSITQFKNTATLQLDESNPVAVPLGTPVAIASTTSVERDDGVETGVWECTPGRWRRQITA CCCCCCCCEEEEEECCCCCEEEECCCCEEEEECCCCCCCCCCCCCEEECCCCHHHHHCCH QEFCHFISGRCTFTPDDGGETLHIQGGDALMLPANTLGIWDIEETVRKTYVLIF HHHHHHHCCEEEECCCCCCCEEEEECCCEEEECCCCCEEEEHHHHCCEEEEEEC >Mature Secondary Structure SITQFKNTATLQLDESNPVAVPLGTPVAIASTTSVERDDGVETGVWECTPGRWRRQITA CCCCCCCEEEEEECCCCCEEEECCCCEEEEECCCCCCCCCCCCCEEECCCCHHHHHCCH QEFCHFISGRCTFTPDDGGETLHIQGGDALMLPANTLGIWDIEETVRKTYVLIF HHHHHHHCCEEEECCCCCCCEEEEECCCEEEECCCCCEEEEHHHHCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA