Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
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Accession | NC_007492 |
Length | 6,438,405 |
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The map label for this gene is ordL [H]
Identifier: 77458900
GI number: 77458900
Start: 3074959
End: 3076365
Strand: Direct
Name: ordL [H]
Synonym: Pfl01_2675
Alternate gene names: 77458900
Gene position: 3074959-3076365 (Clockwise)
Preceding gene: 77458899
Following gene: 77458901
Centisome position: 47.76
GC content: 64.11
Gene sequence:
>1407_bases ATGCCGGCGTGGCGCACTATCAGTTTGTGGATGGATCAACTCGACGAGCCGCTGACCGCGCGCCCGTCGCTTGCGCAGGA CCTGGACGTCGACGTGGCGATCATCGGCGCCGGTTACACCGGACTGTGGACTGCGTACTACCTGAAACAACAGGCGCCGA ACCTGAACATCGCCATCATCGAAGCGCAAACCGCCGGGTTCGGCGCGTCCGGTCGCAACGGCGGCTGGCTGATGGGTAAT CTGTTGGGTGAGGATCGCCTGCTGGCAGGGCTGTCGCCACAACAACGCCGTGCTTCATTCGACCTGTTGCACAGCATTCC CGATGAAGTGGAAATCGTCCTCGAACGCGAAGGCATCGACTGTGATTACCGCAAGGGCGGGGTGCTGTACTGCGCCGCGC GCTATCCCGAGCAGGAAGCCAGTCTTCGCGACTACCTGAAAAAGCTCCACGCCCAGGGCCTGACCGACGACGATTACCGC TGGCTAAGCCCGGAGCAACTGGCGCAGCAACTGCGAATCGCCAAACCCTATGGCGCGATCTTCGCGCCGCACGTGGCGAC CATTCACCCGGCGAAACTGGTGCGCGGCCTGGCGCGAACCGTCGAAAGGATGGGGGTGAAAATCTACGAAAACAGCCCGG TGACCCATTGGCAGGCCGGCAGCCTGCGTACCGACAAGGCCGGCGTGCGCAGCCGCTGGATCGTCCCGGCCATCGAAGGT TATTCCGTCACGCTGCCGCCGCTGGGCCGTTATCAATTACCGGTGCAGAGCCTGATCGTCGCCACCGAGCCGTTGTCCGC CGCGACCTGGGACGCAATCGGCCTGAGCCGAGGCCAGGCTTTCAGCGAGTTCAGCCGTCAGGTCACTTACGGCCAGCGCA GTGCCGACAACCGGCTGATCTTCGGCGCCCGTGGCGGTTATCAGTTCGCTGGCAAGCTGCGCCACAACTTCGACCTGACC CGCGATGAAGTCGAGCTGCGCCGCTACCTGTTCGGCGAATTGTTCCCGCAACTGAAAAACGTCCAGATCACCCACGCCTG GGGCGGGAATCTCGGCATGTCCCGGCATTTCAAACCGCACATGCTCTGTGACCGGGCCAACGGCATCGCGCTGTCCGGCG GCTATGGCGGGGAGGGTGTCGGCGCTTCCAATCTGGGTGGGCGCACGCTTGCGGATCTGATTCTCGAGCGCAACACCGAG CTGACGCATCAGCCGTGGGTGCTGCCCGACGGCGGGATCCACGCGCTGCGGGCCTGGGAGCCGGAACCGTGCCGCTGGCT CGGCTACAACGCGATCATCAAGAGCTTCGTCCACGAAGACCAGACCCTGGCTAACCCGGCGACCGCGCCCTGGCGGCGCA AGCTTGCCAGCCAGGTCGCCGGGTTCATGGAAGGTTTCATGCACTAA
Upstream 100 bases:
>100_bases CTATGCGAAGCAAATTTCTTTGCGGACACGCGCGCAAGACAATCCCTGAGTTCTGCCTCTAGGATCGACGCCATCGAAAC CTGGATTGGCGGAGTCTTGC
Downstream 100 bases:
>100_bases ACGTTTGTTTACTACGAGACAGGTAACGCCATGAGCATCACCCAATTCAAGAACACCGCCACGTTGCAACTGGATGAGTC CAACCCGGTGGCCGTGCCGC
Product: FAD dependent oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 468; Mature: 467
Protein sequence:
>468_residues MPAWRTISLWMDQLDEPLTARPSLAQDLDVDVAIIGAGYTGLWTAYYLKQQAPNLNIAIIEAQTAGFGASGRNGGWLMGN LLGEDRLLAGLSPQQRRASFDLLHSIPDEVEIVLEREGIDCDYRKGGVLYCAARYPEQEASLRDYLKKLHAQGLTDDDYR WLSPEQLAQQLRIAKPYGAIFAPHVATIHPAKLVRGLARTVERMGVKIYENSPVTHWQAGSLRTDKAGVRSRWIVPAIEG YSVTLPPLGRYQLPVQSLIVATEPLSAATWDAIGLSRGQAFSEFSRQVTYGQRSADNRLIFGARGGYQFAGKLRHNFDLT RDEVELRRYLFGELFPQLKNVQITHAWGGNLGMSRHFKPHMLCDRANGIALSGGYGGEGVGASNLGGRTLADLILERNTE LTHQPWVLPDGGIHALRAWEPEPCRWLGYNAIIKSFVHEDQTLANPATAPWRRKLASQVAGFMEGFMH
Sequences:
>Translated_468_residues MPAWRTISLWMDQLDEPLTARPSLAQDLDVDVAIIGAGYTGLWTAYYLKQQAPNLNIAIIEAQTAGFGASGRNGGWLMGN LLGEDRLLAGLSPQQRRASFDLLHSIPDEVEIVLEREGIDCDYRKGGVLYCAARYPEQEASLRDYLKKLHAQGLTDDDYR WLSPEQLAQQLRIAKPYGAIFAPHVATIHPAKLVRGLARTVERMGVKIYENSPVTHWQAGSLRTDKAGVRSRWIVPAIEG YSVTLPPLGRYQLPVQSLIVATEPLSAATWDAIGLSRGQAFSEFSRQVTYGQRSADNRLIFGARGGYQFAGKLRHNFDLT RDEVELRRYLFGELFPQLKNVQITHAWGGNLGMSRHFKPHMLCDRANGIALSGGYGGEGVGASNLGGRTLADLILERNTE LTHQPWVLPDGGIHALRAWEPEPCRWLGYNAIIKSFVHEDQTLANPATAPWRRKLASQVAGFMEGFMH >Mature_467_residues PAWRTISLWMDQLDEPLTARPSLAQDLDVDVAIIGAGYTGLWTAYYLKQQAPNLNIAIIEAQTAGFGASGRNGGWLMGNL LGEDRLLAGLSPQQRRASFDLLHSIPDEVEIVLEREGIDCDYRKGGVLYCAARYPEQEASLRDYLKKLHAQGLTDDDYRW LSPEQLAQQLRIAKPYGAIFAPHVATIHPAKLVRGLARTVERMGVKIYENSPVTHWQAGSLRTDKAGVRSRWIVPAIEGY SVTLPPLGRYQLPVQSLIVATEPLSAATWDAIGLSRGQAFSEFSRQVTYGQRSADNRLIFGARGGYQFAGKLRHNFDLTR DEVELRRYLFGELFPQLKNVQITHAWGGNLGMSRHFKPHMLCDRANGIALSGGYGGEGVGASNLGGRTLADLILERNTEL THQPWVLPDGGIHALRAWEPEPCRWLGYNAIIKSFVHEDQTLANPATAPWRRKLASQVAGFMEGFMH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787559, Length=381, Percent_Identity=27.5590551181102, Blast_Score=127, Evalue=1e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006076 [H]
Pfam domain/function: PF01266 DAO [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 52010; Mature: 51879
Theoretical pI: Translated: 8.03; Mature: 8.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAWRTISLWMDQLDEPLTARPSLAQDLDVDVAIIGAGYTGLWTAYYLKQQAPNLNIAII CCCCEEHHHHHHHCCCCCCCCCCCHHCCCCCEEEEECCHHHHHHHHHHHHCCCCCEEEEE EAQTAGFGASGRNGGWLMGNLLGEDRLLAGLSPQQRRASFDLLHSIPDEVEIVLEREGID EEECCCCCCCCCCCCEEEEECCCCCCEEECCCHHHHHHHHHHHHHCCCCEEEEEECCCCC CDYRKGGVLYCAARYPEQEASLRDYLKKLHAQGLTDDDYRWLSPEQLAQQLRIAKPYGAI CCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCE FAPHVATIHPAKLVRGLARTVERMGVKIYENSPVTHWQAGSLRTDKAGVRSRWIVPAIEG ECCCHHCCCHHHHHHHHHHHHHHCCEEEEECCCCCEEECCCCCCCCCCCCCEEEEEEECC YSVTLPPLGRYQLPVQSLIVATEPLSAATWDAIGLSRGQAFSEFSRQVTYGQRSADNRLI CEEECCCCCCCCCCHHHHEEECCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCCCEEE FGARGGYQFAGKLRHNFDLTRDEVELRRYLFGELFPQLKNVQITHAWGGNLGMSRHFKPH EECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCC MLCDRANGIALSGGYGGEGVGASNLGGRTLADLILERNTELTHQPWVLPDGGIHALRAWE CEEECCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEECCCCCCEEEECCC PEPCRWLGYNAIIKSFVHEDQTLANPATAPWRRKLASQVAGFMEGFMH CCCCCCCCHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PAWRTISLWMDQLDEPLTARPSLAQDLDVDVAIIGAGYTGLWTAYYLKQQAPNLNIAII CCCEEHHHHHHHCCCCCCCCCCCHHCCCCCEEEEECCHHHHHHHHHHHHCCCCCEEEEE EAQTAGFGASGRNGGWLMGNLLGEDRLLAGLSPQQRRASFDLLHSIPDEVEIVLEREGID EEECCCCCCCCCCCCEEEEECCCCCCEEECCCHHHHHHHHHHHHHCCCCEEEEEECCCCC CDYRKGGVLYCAARYPEQEASLRDYLKKLHAQGLTDDDYRWLSPEQLAQQLRIAKPYGAI CCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCE FAPHVATIHPAKLVRGLARTVERMGVKIYENSPVTHWQAGSLRTDKAGVRSRWIVPAIEG ECCCHHCCCHHHHHHHHHHHHHHCCEEEEECCCCCEEECCCCCCCCCCCCCEEEEEEECC YSVTLPPLGRYQLPVQSLIVATEPLSAATWDAIGLSRGQAFSEFSRQVTYGQRSADNRLI CEEECCCCCCCCCCHHHHEEECCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCCCEEE FGARGGYQFAGKLRHNFDLTRDEVELRRYLFGELFPQLKNVQITHAWGGNLGMSRHFKPH EECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCC MLCDRANGIALSGGYGGEGVGASNLGGRTLADLILERNTELTHQPWVLPDGGIHALRAWE CEEECCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEECCCCCCEEEECCC PEPCRWLGYNAIIKSFVHEDQTLANPATAPWRRKLASQVAGFMEGFMH CCCCCCCCHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]