Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
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Accession | NC_007492 |
Length | 6,438,405 |
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The map label for this gene is 77458889
Identifier: 77458889
GI number: 77458889
Start: 3059193
End: 3060938
Strand: Direct
Name: 77458889
Synonym: Pfl01_2664
Alternate gene names: NA
Gene position: 3059193-3060938 (Clockwise)
Preceding gene: 77458888
Following gene: 77458892
Centisome position: 47.51
GC content: 53.61
Gene sequence:
>1746_bases ATGGAACAATTTAAACAGTTCAATGCCAGCAAGACCGAGGTGATCAAGTCGCTCGACAACCTCCAGAAACTGGTGGGCGC GCTGGAGGCACTTGGGCTGGACGTCTCTCAGGACATCGAAAAGATCAGGAAGGCGATCGGCGACGTTCAGTCCGATGCCT TGCGTATCGCTTTGCTGGGTGCATTTTCCGACGGCAAGACCAGCGTAGTTGCCGGCTGGCTGGGCCAGGTCATGAAAGAC ATGAAGATCGACACCAATGAGTCTTCGGACGCATTGGCGATCTATCGTCCCGACAATCTTCAGGACCGTTGTGAGATTGT TGACACTCCCGGTCTGTTCGGTGACAAGGAAAAGGCAGCTGAAAACGGCGCGCTGGTGCAATACGGCGATATCACCAAGA ACTATATTTCCGAGGCGCATCTGATCTTCTATGTGGTCGATGCCACGAACCCGCTCAAGGAAAGTCACCAGGACATCGTC CGCTGGGTACTGCGCGATCTTAACAAGTTGAGTTCGACCATTTTCGTCATCAATAAAATGGATGAAGTTGCCGATCTGCG CGATGCCGAAGAGTTCGAGCAGCAGAGCACAATCAAAAAGAACAACCTGCTGGATAAATTGCAGCGTTTTGTCGACCTCT CTGCGGCCGAGCGTGATGCGATCAATGTGGTCTGCGTAGCCTCCAACCCGAATAGCCGCGGACTGGAGTTCTGGCTGGAG CAAAAGGACCTGTATGACCAGCGCTCGCGAATCAGCGAACTCAAAGTGGTGACGCAACAAGTACTCGATGGCAGCGGTCG TGAAACCCTGATCAAGAAGACCGGCATCGATGTCGTGCGTGATGTGCTGGGCAAGAAAATCGCCCTGGCTCAGGACGAGT TGATCAAGTTCAGGCTGTTGGCCGATAACCAGCGACGTGATTCCGCACGCATCCAGGAGGACATTGCCGAGGGCAAACGG AAAGTCCTAGCGACGGTCGGCAACCTCTACGAAGAGTTGAACAACCTCGAAACCGATTTGCTTAACAGCATTCGCACATT GCCGCGCGACCAGGTACGCGCCTTTCTCGAATCGCAGATTGGTTTTTCGAACAATGATATCGGCGAGAAGCTGCGCTTTC GCATAGATCACCTGTTCAGCACCGCATTCAACCAGTCCTCAAGCATCATGAGCGGCATCAGTGCCAAGATCGAACATCAA CTAGACAGCTCTTCGGACTTCGCCGACAGCATCACCGCGTCGGCGTTGTCAGCGTCGAGCCGTGCGCTGACGGCCGTATC GAAAATTCCTGTTGAAAGCATCAAGAGTGGCGTATTCCTGGCCCGTGAGACCCTGAAAAACCTCACCGGCTATGTCTACA AATTCAAACCTTGGGAAGCAACCAAGCTGGCTGCCAACATCAGCCGGTGGGCCGGCCCGATTGGTGCAGGCATTCAGGTG TTGACTGACGTCATTAGTGTTGCCCAGCAGCAGCGTGCGGAAACCGAACTGAAACAGTTGCAGGGCGATTTGGCCGAAGT GGTCAAAAGCTACTTTGCCGAGCCAATGAAACTGCTGATGGATCACGAAAAAGTCATGGATATTTTCGCGCCACAAATCA AGGCGTTCGAGAAGATCCTGGTCGAGCAGGAAGCTAGCCTCGATGACCTGCGCAACCGCCAGACTCAACTGGCAGAGCTT GAGACCCACTTAAGCCAAGCGTTTGACTCGCAAAATGTCATCGAAGGCGAGTACGGCGTGGTTTGA
Upstream 100 bases:
>100_bases TTAACGGACGAACGCCGCAAGATGGCCGACGTCACTCGCTTGTTCGATGAAAAGATCGCCTCGATTCAGGCACTGAAAAA CGAGGTGGGAGATAGACCCT
Downstream 100 bases:
>100_bases TCCGGTGAGCCTGGCCAGCAGCCGCTGGCCAGGTTTTATATCAGCACGTCAGAGCAACCCTTCATTGTTCAGCTTCAAGC GCGCGTAGAAGACAGCCGCA
Product: HSR1-like GTP-binding protein
Products: NA
Alternate protein names: LeoA Protein
Number of amino acids: Translated: 581; Mature: 581
Protein sequence:
>581_residues MEQFKQFNASKTEVIKSLDNLQKLVGALEALGLDVSQDIEKIRKAIGDVQSDALRIALLGAFSDGKTSVVAGWLGQVMKD MKIDTNESSDALAIYRPDNLQDRCEIVDTPGLFGDKEKAAENGALVQYGDITKNYISEAHLIFYVVDATNPLKESHQDIV RWVLRDLNKLSSTIFVINKMDEVADLRDAEEFEQQSTIKKNNLLDKLQRFVDLSAAERDAINVVCVASNPNSRGLEFWLE QKDLYDQRSRISELKVVTQQVLDGSGRETLIKKTGIDVVRDVLGKKIALAQDELIKFRLLADNQRRDSARIQEDIAEGKR KVLATVGNLYEELNNLETDLLNSIRTLPRDQVRAFLESQIGFSNNDIGEKLRFRIDHLFSTAFNQSSSIMSGISAKIEHQ LDSSSDFADSITASALSASSRALTAVSKIPVESIKSGVFLARETLKNLTGYVYKFKPWEATKLAANISRWAGPIGAGIQV LTDVISVAQQQRAETELKQLQGDLAEVVKSYFAEPMKLLMDHEKVMDIFAPQIKAFEKILVEQEASLDDLRNRQTQLAEL ETHLSQAFDSQNVIEGEYGVV
Sequences:
>Translated_581_residues MEQFKQFNASKTEVIKSLDNLQKLVGALEALGLDVSQDIEKIRKAIGDVQSDALRIALLGAFSDGKTSVVAGWLGQVMKD MKIDTNESSDALAIYRPDNLQDRCEIVDTPGLFGDKEKAAENGALVQYGDITKNYISEAHLIFYVVDATNPLKESHQDIV RWVLRDLNKLSSTIFVINKMDEVADLRDAEEFEQQSTIKKNNLLDKLQRFVDLSAAERDAINVVCVASNPNSRGLEFWLE QKDLYDQRSRISELKVVTQQVLDGSGRETLIKKTGIDVVRDVLGKKIALAQDELIKFRLLADNQRRDSARIQEDIAEGKR KVLATVGNLYEELNNLETDLLNSIRTLPRDQVRAFLESQIGFSNNDIGEKLRFRIDHLFSTAFNQSSSIMSGISAKIEHQ LDSSSDFADSITASALSASSRALTAVSKIPVESIKSGVFLARETLKNLTGYVYKFKPWEATKLAANISRWAGPIGAGIQV LTDVISVAQQQRAETELKQLQGDLAEVVKSYFAEPMKLLMDHEKVMDIFAPQIKAFEKILVEQEASLDDLRNRQTQLAEL ETHLSQAFDSQNVIEGEYGVV >Mature_581_residues MEQFKQFNASKTEVIKSLDNLQKLVGALEALGLDVSQDIEKIRKAIGDVQSDALRIALLGAFSDGKTSVVAGWLGQVMKD MKIDTNESSDALAIYRPDNLQDRCEIVDTPGLFGDKEKAAENGALVQYGDITKNYISEAHLIFYVVDATNPLKESHQDIV RWVLRDLNKLSSTIFVINKMDEVADLRDAEEFEQQSTIKKNNLLDKLQRFVDLSAAERDAINVVCVASNPNSRGLEFWLE QKDLYDQRSRISELKVVTQQVLDGSGRETLIKKTGIDVVRDVLGKKIALAQDELIKFRLLADNQRRDSARIQEDIAEGKR KVLATVGNLYEELNNLETDLLNSIRTLPRDQVRAFLESQIGFSNNDIGEKLRFRIDHLFSTAFNQSSSIMSGISAKIEHQ LDSSSDFADSITASALSASSRALTAVSKIPVESIKSGVFLARETLKNLTGYVYKFKPWEATKLAANISRWAGPIGAGIQV LTDVISVAQQQRAETELKQLQGDLAEVVKSYFAEPMKLLMDHEKVMDIFAPQIKAFEKILVEQEASLDDLRNRQTQLAEL ETHLSQAFDSQNVIEGEYGVV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64864; Mature: 64864
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQFKQFNASKTEVIKSLDNLQKLVGALEALGLDVSQDIEKIRKAIGDVQSDALRIALLG CCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHEEEEEEE AFSDGKTSVVAGWLGQVMKDMKIDTNESSDALAIYRPDNLQDRCEIVDTPGLFGDKEKAA ECCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCHHHEECCCCCCCCHHHHH ENGALVQYGDITKNYISEAHLIFYVVDATNPLKESHQDIVRWVLRDLNKLSSTIFVINKM CCCCEEEECCHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECH DEVADLRDAEEFEQQSTIKKNNLLDKLQRFVDLSAAERDAINVVCVASNPNSRGLEFWLE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHH QKDLYDQRSRISELKVVTQQVLDGSGRETLIKKTGIDVVRDVLGKKIALAQDELIKFRLL HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH ADNQRRDSARIQEDIAEGKRKVLATVGNLYEELNNLETDLLNSIRTLPRDQVRAFLESQI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHC GFSNNDIGEKLRFRIDHLFSTAFNQSSSIMSGISAKIEHQLDSSSDFADSITASALSASS CCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH RALTAVSKIPVESIKSGVFLARETLKNLTGYVYKFKPWEATKLAANISRWAGPIGAGIQV HHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHCCCCCHHHHH LTDVISVAQQQRAETELKQLQGDLAEVVKSYFAEPMKLLMDHEKVMDIFAPQIKAFEKIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VEQEASLDDLRNRQTQLAELETHLSQAFDSQNVIEGEYGVV HHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MEQFKQFNASKTEVIKSLDNLQKLVGALEALGLDVSQDIEKIRKAIGDVQSDALRIALLG CCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHEEEEEEE AFSDGKTSVVAGWLGQVMKDMKIDTNESSDALAIYRPDNLQDRCEIVDTPGLFGDKEKAA ECCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCHHHEECCCCCCCCHHHHH ENGALVQYGDITKNYISEAHLIFYVVDATNPLKESHQDIVRWVLRDLNKLSSTIFVINKM CCCCEEEECCHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECH DEVADLRDAEEFEQQSTIKKNNLLDKLQRFVDLSAAERDAINVVCVASNPNSRGLEFWLE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHH QKDLYDQRSRISELKVVTQQVLDGSGRETLIKKTGIDVVRDVLGKKIALAQDELIKFRLL HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH ADNQRRDSARIQEDIAEGKRKVLATVGNLYEELNNLETDLLNSIRTLPRDQVRAFLESQI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHC GFSNNDIGEKLRFRIDHLFSTAFNQSSSIMSGISAKIEHQLDSSSDFADSITASALSASS CCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH RALTAVSKIPVESIKSGVFLARETLKNLTGYVYKFKPWEATKLAANISRWAGPIGAGIQV HHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHCCCCCHHHHH LTDVISVAQQQRAETELKQLQGDLAEVVKSYFAEPMKLLMDHEKVMDIFAPQIKAFEKIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VEQEASLDDLRNRQTQLAELETHLSQAFDSQNVIEGEYGVV HHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA