Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
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Accession | NC_007492 |
Length | 6,438,405 |
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The map label for this gene is 77458888
Identifier: 77458888
GI number: 77458888
Start: 3057575
End: 3059206
Strand: Direct
Name: 77458888
Synonym: Pfl01_2663
Alternate gene names: NA
Gene position: 3057575-3059206 (Clockwise)
Preceding gene: 77458887
Following gene: 77458889
Centisome position: 47.49
GC content: 55.33
Gene sequence:
>1632_bases ATGCACGAACAACACTCTTTGAGCGAGCTGGTTAGCGACAGGCTCCCGACATTGCTCACACAACAGAAAGAACTCGAAAG CCTGCAGCGTTGTGCCGGCCAGGTCGACGGCGAGATCGTTGGCACCGGCCAAGCAGACTTCACCCAGGACAACGTGATCT ACCAGTTCTGCCATCAGGGCAAGAACTTTCACCTTATCGACGTCCCCGGTATCGAGGGTAACGAGTCGAAATACGAAGCA ATGGTTCAGGCGGCCATCGCCAAAGCCCATCTGGTGTTCTACGTAAACGGCACCAATAAAAAACCAGAGGCCGAGACCGC CCGGAAGATCAAGCACTACCTCAATCGCGATGCCAAGGTGTATGCGATTTGCAATCTGCGCGGCAAGGCGGACTCCTACG AGTTCGACAGTGACCGTGAATCGCTTGAGCTGACTCATAAAGATGCCGTCGCGACCCGCGAACAGACTCGTGAGGTGCTT GAAGACATCCTGGGTACCGAACTCGTTAGCGGCTGCCAAAGCCTGCAAGGATTGCTCGGTTTTACGGGGGTCGCATTCGA TGAGCGTGGCCTGACCAGCATTCACCCCGCTCGAACCGACCTGCTCAAGTCGCAACGTGCCTACAAACAGGACTTTGTCA GCCAACAAGCGATGCGTAGCTTCAGCCAGTTGGATCAGTTACACCAGGTCATCGGCGATGGCTGCGCCAGTTTTGAGGTC GACATCGTCGAAAGTAACAAGCGCAAAGTGCTGCGCCTGCTGCAAGACACCATCGCGGACCTGCAGAAGCAACGAGACGA GCATCAGGCAGTCTGCGCCCGGATCGGTGTGGAAGTTCTCGAGTGCCAAGAGGTCATTCGCAAAAGTTTCCAGGACCTAG CGAGCAGCTTCGGCTCCAAGCGCAATAGCGCACTGGATCGGTTTTTCAATGATCTGACTTCGGAGGCGCGCGAAGCTGTC GAAGTGCACTTCAGTGACAAGGATGATGTCGAGCGTGTCATTCAGCGCCACGTCAGCGACGGACAGTCACAACTGTCCAA TAGGCTGGAGGAGATCCAGGAGCAGTTGCTTGAAGACCTGTCCCGGACCATCGAGCGTGCACTCAAGCGCCTGCAGGAAA ATGCCGAGCGAGTGAGTTTCCAGCAGCGTTTGAGCGAAGCAGCGAATAACTCCATTTCGCTGTCCAGTGCCATGGACGCC ATCAGTTTCAATTTCTCTGACGTAGGCAGTTTCCTGCTGAGCGTCGGCGGCTATGCCTTGAGCGGGTTCAGTATCGGTAC GTTTTTTCCGGTGATCGGCAACATCGTCGGAGCGATTGTCGGCGGCGTGATCGGCGTGTTCGCCGCGGCGTTTGGTTACT TCCTCGGCGGTCGCGGCAAGAAAATTGCCGAAGCCCAGGAGCAAGTCGCCAAGGCCATCAAGGCCGAGCGTGAAAAGGTA ACGAAGACCTTCAAGCGTGATACCGAAGACATGCTGGCGAAGATCAAGGACAAAATCGAAAGCTCAGTCTTGAGCCAATT AACGGACGAACGCCGCAAGATGGCCGACGTCACTCGCTTGTTCGATGAAAAGATCGCCTCGATTCAGGCACTGAAAAACG AGGTGGGAGATAGACCCTATGGAACAATTTAA
Upstream 100 bases:
>100_bases TGGGAGCCATTGCAGGTGCCCTGGGTTATGCGCAATTGCTGTGAGCCATTGCATTGATGCCCTTGCAATGACCTTCTCTT CGTAGAATCCGGACCTACTC
Downstream 100 bases:
>100_bases ACAGTTCAATGCCAGCAAGACCGAGGTGATCAAGTCGCTCGACAACCTCCAGAAACTGGTGGGCGCGCTGGAGGCACTTG GGCTGGACGTCTCTCAGGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 543; Mature: 543
Protein sequence:
>543_residues MHEQHSLSELVSDRLPTLLTQQKELESLQRCAGQVDGEIVGTGQADFTQDNVIYQFCHQGKNFHLIDVPGIEGNESKYEA MVQAAIAKAHLVFYVNGTNKKPEAETARKIKHYLNRDAKVYAICNLRGKADSYEFDSDRESLELTHKDAVATREQTREVL EDILGTELVSGCQSLQGLLGFTGVAFDERGLTSIHPARTDLLKSQRAYKQDFVSQQAMRSFSQLDQLHQVIGDGCASFEV DIVESNKRKVLRLLQDTIADLQKQRDEHQAVCARIGVEVLECQEVIRKSFQDLASSFGSKRNSALDRFFNDLTSEAREAV EVHFSDKDDVERVIQRHVSDGQSQLSNRLEEIQEQLLEDLSRTIERALKRLQENAERVSFQQRLSEAANNSISLSSAMDA ISFNFSDVGSFLLSVGGYALSGFSIGTFFPVIGNIVGAIVGGVIGVFAAAFGYFLGGRGKKIAEAQEQVAKAIKAEREKV TKTFKRDTEDMLAKIKDKIESSVLSQLTDERRKMADVTRLFDEKIASIQALKNEVGDRPYGTI
Sequences:
>Translated_543_residues MHEQHSLSELVSDRLPTLLTQQKELESLQRCAGQVDGEIVGTGQADFTQDNVIYQFCHQGKNFHLIDVPGIEGNESKYEA MVQAAIAKAHLVFYVNGTNKKPEAETARKIKHYLNRDAKVYAICNLRGKADSYEFDSDRESLELTHKDAVATREQTREVL EDILGTELVSGCQSLQGLLGFTGVAFDERGLTSIHPARTDLLKSQRAYKQDFVSQQAMRSFSQLDQLHQVIGDGCASFEV DIVESNKRKVLRLLQDTIADLQKQRDEHQAVCARIGVEVLECQEVIRKSFQDLASSFGSKRNSALDRFFNDLTSEAREAV EVHFSDKDDVERVIQRHVSDGQSQLSNRLEEIQEQLLEDLSRTIERALKRLQENAERVSFQQRLSEAANNSISLSSAMDA ISFNFSDVGSFLLSVGGYALSGFSIGTFFPVIGNIVGAIVGGVIGVFAAAFGYFLGGRGKKIAEAQEQVAKAIKAEREKV TKTFKRDTEDMLAKIKDKIESSVLSQLTDERRKMADVTRLFDEKIASIQALKNEVGDRPYGTI >Mature_543_residues MHEQHSLSELVSDRLPTLLTQQKELESLQRCAGQVDGEIVGTGQADFTQDNVIYQFCHQGKNFHLIDVPGIEGNESKYEA MVQAAIAKAHLVFYVNGTNKKPEAETARKIKHYLNRDAKVYAICNLRGKADSYEFDSDRESLELTHKDAVATREQTREVL EDILGTELVSGCQSLQGLLGFTGVAFDERGLTSIHPARTDLLKSQRAYKQDFVSQQAMRSFSQLDQLHQVIGDGCASFEV DIVESNKRKVLRLLQDTIADLQKQRDEHQAVCARIGVEVLECQEVIRKSFQDLASSFGSKRNSALDRFFNDLTSEAREAV EVHFSDKDDVERVIQRHVSDGQSQLSNRLEEIQEQLLEDLSRTIERALKRLQENAERVSFQQRLSEAANNSISLSSAMDA ISFNFSDVGSFLLSVGGYALSGFSIGTFFPVIGNIVGAIVGGVIGVFAAAFGYFLGGRGKKIAEAQEQVAKAIKAEREKV TKTFKRDTEDMLAKIKDKIESSVLSQLTDERRKMADVTRLFDEKIASIQALKNEVGDRPYGTI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60547; Mature: 60547
Theoretical pI: Translated: 5.45; Mature: 5.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHEQHSLSELVSDRLPTLLTQQKELESLQRCAGQVDGEIVGTGQADFTQDNVIYQFCHQG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHCC KNFHLIDVPGIEGNESKYEAMVQAAIAKAHLVFYVNGTNKKPEAETARKIKHYLNRDAKV CCEEEEECCCCCCCHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHHCCCCEE YAICNLRGKADSYEFDSDRESLELTHKDAVATREQTREVLEDILGTELVSGCQSLQGLLG EEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FTGVAFDERGLTSIHPARTDLLKSQRAYKQDFVSQQAMRSFSQLDQLHQVIGDGCASFEV HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE DIVESNKRKVLRLLQDTIADLQKQRDEHQAVCARIGVEVLECQEVIRKSFQDLASSFGSK EHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH RNSALDRFFNDLTSEAREAVEVHFSDKDDVERVIQRHVSDGQSQLSNRLEEIQEQLLEDL HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH SRTIERALKRLQENAERVSFQQRLSEAANNSISLSSAMDAISFNFSDVGSFLLSVGGYAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHCCHHHHHHHHHHHCCHHH SGFSIGTFFPVIGNIVGAIVGGVIGVFAAAFGYFLGGRGKKIAEAQEQVAKAIKAEREKV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH TKTFKRDTEDMLAKIKDKIESSVLSQLTDERRKMADVTRLFDEKIASIQALKNEVGDRPY HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GTI CCC >Mature Secondary Structure MHEQHSLSELVSDRLPTLLTQQKELESLQRCAGQVDGEIVGTGQADFTQDNVIYQFCHQG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHCC KNFHLIDVPGIEGNESKYEAMVQAAIAKAHLVFYVNGTNKKPEAETARKIKHYLNRDAKV CCEEEEECCCCCCCHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHHCCCCEE YAICNLRGKADSYEFDSDRESLELTHKDAVATREQTREVLEDILGTELVSGCQSLQGLLG EEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FTGVAFDERGLTSIHPARTDLLKSQRAYKQDFVSQQAMRSFSQLDQLHQVIGDGCASFEV HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE DIVESNKRKVLRLLQDTIADLQKQRDEHQAVCARIGVEVLECQEVIRKSFQDLASSFGSK EHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH RNSALDRFFNDLTSEAREAVEVHFSDKDDVERVIQRHVSDGQSQLSNRLEEIQEQLLEDL HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH SRTIERALKRLQENAERVSFQQRLSEAANNSISLSSAMDAISFNFSDVGSFLLSVGGYAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHCCHHHHHHHHHHHCCHHH SGFSIGTFFPVIGNIVGAIVGGVIGVFAAAFGYFLGGRGKKIAEAQEQVAKAIKAEREKV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH TKTFKRDTEDMLAKIKDKIESSVLSQLTDERRKMADVTRLFDEKIASIQALKNEVGDRPY HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GTI CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA