Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
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Accession | NC_007492 |
Length | 6,438,405 |
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The map label for this gene is qorA [H]
Identifier: 77458892
GI number: 77458892
Start: 3063762
End: 3064784
Strand: Direct
Name: qorA [H]
Synonym: Pfl01_2667
Alternate gene names: 77458892
Gene position: 3063762-3064784 (Clockwise)
Preceding gene: 77458889
Following gene: 77458893
Centisome position: 47.59
GC content: 61.49
Gene sequence:
>1023_bases ATGTCCCGCACGATCCGTTTTCACAAGTTTGGTCCGGCCGAGGTGCTCAAATGCGAAGAGCATGCGGCTGCTCAGCCAGG TCCTGGCGAAGTGCAGGTGCGTGTCGAGGCGATCGGCATCAGCTGGTATGACACGCTCTGGCGCCAGAATCTGGCGTCGT CCCAGGCGCGCCTGCCTTCAGGCCTGGGTCATGAAATGGCCGGCGTGGTCACGGCCATCGGCGATGGCGTCGAAGATCTG GCAGTGGGCGACAAGGTGGCCAGTTTCCCGGCCGAGAGTCCCAACGATTACCCGGTCTACGGCGAACTGATCGTTCTGCC GCGCACCGCGCTGACCCGCTATCCGGATGTGCTCAGCCCGATTGAAGCCAGCGTGCATTACACGCCGCTGTTGATCGCCT ATTTCGGATACGTTGATCTGGCACGGGTCAAACCCGGGCAGTTCGCCCTGGTAACCGACGCCAGCCACTGCGCCGGCCCA TCCTTCGTTCAGTTGGGCAAAGCACTGGGTGTGCGGGTGATTGCCGCCACCAAAACAGCGGAGGAGCGTGAGTACCTGCT GTCGCTCGGTGCCGAGAAAGTGATTGTCACCGAAGAAGAAGACCTGTTGATGCGGATCAACAAGATCACCGACAACCGCG GTGTCGACGTGGTGTTCGATGGTCTCGGCGGGCCACAGATGTCGCTGCTCGGCGATGTGCTGGCACCGCGTGGCAGCCTG GTGCTGTACGGCCTGCAGGGCGGCAACCAGACGCCATTCCCGGCCTGTGCGGCGTTCCAGAAGAACATTCAGTTCTTCGT ACATTGCATCGGCAACTTCACCGGCAAACCGGAGCTCGGCATCATTCAGGACCACGTCGCCTTGCAGCGTGCCTTGCGTG ATATCAACCAGCTCACCGCTGACCGTGTGCTGCTGCCGCTCAAGACCCGGGTGTTTCCGTTCAACGAGTTTGTCGAAGCT CACCGCTACATGGACGAGTGCCCATGCCGCGAGCGGGTTGCCCTGCAAATCGAACCTGCCTGA
Upstream 100 bases:
>100_bases TCAATGACAGGCATGTCGACTATTAATAGCCACTGATAGTCTTGGCTGGAAAGCCCAGATAGAGTTCATGGCATTAGAGG TTACTTTGACGAGGTTTGCG
Downstream 100 bases:
>100_bases TCCTTCCAGTCAGAGTCCGTGGCCCCACGGACTCTTGTGCGTTTTATCCTTCATACATCGAGAATCCCTGGGCCAGACAC CCGGGAACGTTCAGCAACTG
Product: zinc-containing alcohol dehydrogenase superfamily protein
Products: NA
Alternate protein names: NADPH:quinone reductase 1; Zeta-crystallin homolog protein [H]
Number of amino acids: Translated: 340; Mature: 339
Protein sequence:
>340_residues MSRTIRFHKFGPAEVLKCEEHAAAQPGPGEVQVRVEAIGISWYDTLWRQNLASSQARLPSGLGHEMAGVVTAIGDGVEDL AVGDKVASFPAESPNDYPVYGELIVLPRTALTRYPDVLSPIEASVHYTPLLIAYFGYVDLARVKPGQFALVTDASHCAGP SFVQLGKALGVRVIAATKTAEEREYLLSLGAEKVIVTEEEDLLMRINKITDNRGVDVVFDGLGGPQMSLLGDVLAPRGSL VLYGLQGGNQTPFPACAAFQKNIQFFVHCIGNFTGKPELGIIQDHVALQRALRDINQLTADRVLLPLKTRVFPFNEFVEA HRYMDECPCRERVALQIEPA
Sequences:
>Translated_340_residues MSRTIRFHKFGPAEVLKCEEHAAAQPGPGEVQVRVEAIGISWYDTLWRQNLASSQARLPSGLGHEMAGVVTAIGDGVEDL AVGDKVASFPAESPNDYPVYGELIVLPRTALTRYPDVLSPIEASVHYTPLLIAYFGYVDLARVKPGQFALVTDASHCAGP SFVQLGKALGVRVIAATKTAEEREYLLSLGAEKVIVTEEEDLLMRINKITDNRGVDVVFDGLGGPQMSLLGDVLAPRGSL VLYGLQGGNQTPFPACAAFQKNIQFFVHCIGNFTGKPELGIIQDHVALQRALRDINQLTADRVLLPLKTRVFPFNEFVEA HRYMDECPCRERVALQIEPA >Mature_339_residues SRTIRFHKFGPAEVLKCEEHAAAQPGPGEVQVRVEAIGISWYDTLWRQNLASSQARLPSGLGHEMAGVVTAIGDGVEDLA VGDKVASFPAESPNDYPVYGELIVLPRTALTRYPDVLSPIEASVHYTPLLIAYFGYVDLARVKPGQFALVTDASHCAGPS FVQLGKALGVRVIAATKTAEEREYLLSLGAEKVIVTEEEDLLMRINKITDNRGVDVVFDGLGGPQMSLLGDVLAPRGSLV LYGLQGGNQTPFPACAAFQKNIQFFVHCIGNFTGKPELGIIQDHVALQRALRDINQLTADRVLLPLKTRVFPFNEFVEAH RYMDECPCRERVALQIEPA
Specific function: Unknown
COG id: COG0604
COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily [H]
Homologues:
Organism=Homo sapiens, GI18379349, Length=313, Percent_Identity=27.1565495207668, Blast_Score=92, Evalue=7e-19, Organism=Homo sapiens, GI194239674, Length=248, Percent_Identity=26.6129032258064, Blast_Score=90, Evalue=3e-18, Organism=Homo sapiens, GI13236495, Length=248, Percent_Identity=26.6129032258064, Blast_Score=90, Evalue=3e-18, Organism=Homo sapiens, GI24308257, Length=242, Percent_Identity=26.0330578512397, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI22538446, Length=336, Percent_Identity=24.4047619047619, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI22538444, Length=336, Percent_Identity=24.4047619047619, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI194239676, Length=215, Percent_Identity=27.906976744186, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI28557745, Length=232, Percent_Identity=29.3103448275862, Blast_Score=73, Evalue=3e-13, Organism=Escherichia coli, GI1790485, Length=251, Percent_Identity=33.8645418326693, Blast_Score=117, Evalue=1e-27, Organism=Escherichia coli, GI1788073, Length=245, Percent_Identity=26.9387755102041, Blast_Score=68, Evalue=7e-13, Organism=Saccharomyces cerevisiae, GI6319520, Length=279, Percent_Identity=25.8064516129032, Blast_Score=84, Evalue=3e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR011032 - InterPro: IPR016040 - InterPro: IPR002364 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: =1.6.5.5 [H]
Molecular weight: Translated: 37124; Mature: 36993
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: PS00059 ADH_ZINC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRTIRFHKFGPAEVLKCEEHAAAQPGPGEVQVRVEAIGISWYDTLWRQNLASSQARLPS CCCCEEEECCCHHHHHCCHHHCCCCCCCCCEEEEEEEEECHHHHHHHHHHHHHHHHCCCC GLGHEMAGVVTAIGDGVEDLAVGDKVASFPAESPNDYPVYGELIVLPRTALTRYPDVLSP CCCHHHHHHHHHHCCCHHHHHHCCHHHCCCCCCCCCCCCEEEEEEECCHHHHHCCHHHHH IEASVHYTPLLIAYFGYVDLARVKPGQFALVTDASHCAGPSFVQLGKALGVRVIAATKTA HHCCCCHHHHHHHHHCHHEEEEECCCCEEEEECCHHHCCCHHHHHHHHHCEEEEEECCCH EEREYLLSLGAEKVIVTEEEDLLMRINKITDNRGVDVVFDGLGGPQMSLLGDVLAPRGSL HHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHCCCCCE VLYGLQGGNQTPFPACAAFQKNIQFFVHCIGNFTGKPELGIIQDHVALQRALRDINQLTA EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH DRVLLPLKTRVFPFNEFVEAHRYMDECPCRERVALQIEPA HHEEEEHHHEECCHHHHHHHHHHHHHCCCCCCEEEEEECC >Mature Secondary Structure SRTIRFHKFGPAEVLKCEEHAAAQPGPGEVQVRVEAIGISWYDTLWRQNLASSQARLPS CCCEEEECCCHHHHHCCHHHCCCCCCCCCEEEEEEEEECHHHHHHHHHHHHHHHHCCCC GLGHEMAGVVTAIGDGVEDLAVGDKVASFPAESPNDYPVYGELIVLPRTALTRYPDVLSP CCCHHHHHHHHHHCCCHHHHHHCCHHHCCCCCCCCCCCCEEEEEEECCHHHHHCCHHHHH IEASVHYTPLLIAYFGYVDLARVKPGQFALVTDASHCAGPSFVQLGKALGVRVIAATKTA HHCCCCHHHHHHHHHCHHEEEEECCCCEEEEECCHHHCCCHHHHHHHHHCEEEEEECCCH EEREYLLSLGAEKVIVTEEEDLLMRINKITDNRGVDVVFDGLGGPQMSLLGDVLAPRGSL HHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHCCCCCE VLYGLQGGNQTPFPACAAFQKNIQFFVHCIGNFTGKPELGIIQDHVALQRALRDINQLTA EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH DRVLLPLKTRVFPFNEFVEAHRYMDECPCRERVALQIEPA HHEEEEHHHEECCHHHHHHHHHHHHHCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8265357; 9278503; 7602590 [H]