Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
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Accession | NC_007492 |
Length | 6,438,405 |
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The map label for this gene is yegP [H]
Identifier: 77457531
GI number: 77457531
Start: 1480383
End: 1480727
Strand: Direct
Name: yegP [H]
Synonym: Pfl01_1304
Alternate gene names: 77457531
Gene position: 1480383-1480727 (Clockwise)
Preceding gene: 77457530
Following gene: 77457532
Centisome position: 22.99
GC content: 57.39
Gene sequence:
>345_bases ATGTCCGGATGGTATGAGTTGAGCAAAAGCAGCAACGGCCAGTACAAGTTCGTGCTGAAAGCGGCGAATGCCGAAACCAT TCTGACCAGCGAGCTGTACACCAGCCGCACGGCCGCCGAAAACGGCATTGCCTCGGTGCAGACCAACAGCCCGCTGGACG AACGTTACGAGAAAAAGTCGACGAAGGACGGCCATCCGTACTTCAACCTCAAGGCGGCCAATCATCAGATCATCGGCAGC AGCGAGTCCTATTCATCGGATGCGGCGTGTGCCAAAGGCATCGCCAGCGTCAAGGCCAACGGGCCGTCCAAGGTGATCAA GGACAAAACCCTGCCGGTGCTTTGA
Upstream 100 bases:
>100_bases ACCGCGCCCGCCTGGCCGGCGCACCCGAAATGGCTGGCCGGTTTCCTCGGTTTGCTTGGAACCAAAATCACCCTGTGACA CATCGATAAGGAGAAACACC
Downstream 100 bases:
>100_bases CCCCCCCGTGACATTCGGTCGCCAAATCTTTGGCGACTGAATTCTGGCTATGTGCCATCATTTCGCTTATCCTCCGCCGC CAATCCATGGAAGGGGCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 114; Mature: 113
Protein sequence:
>114_residues MSGWYELSKSSNGQYKFVLKAANAETILTSELYTSRTAAENGIASVQTNSPLDERYEKKSTKDGHPYFNLKAANHQIIGS SESYSSDAACAKGIASVKANGPSKVIKDKTLPVL
Sequences:
>Translated_114_residues MSGWYELSKSSNGQYKFVLKAANAETILTSELYTSRTAAENGIASVQTNSPLDERYEKKSTKDGHPYFNLKAANHQIIGS SESYSSDAACAKGIASVKANGPSKVIKDKTLPVL >Mature_113_residues SGWYELSKSSNGQYKFVLKAANAETILTSELYTSRTAAENGIASVQTNSPLDERYEKKSTKDGHPYFNLKAANHQIIGSS ESYSSDAACAKGIASVKANGPSKVIKDKTLPVL
Specific function: Unknown
COG id: COG3422
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0339 family. Duplicated subfamily [H]
Homologues:
Organism=Escherichia coli, GI87082037, Length=110, Percent_Identity=67.2727272727273, Blast_Score=156, Evalue=2e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010879 [H]
Pfam domain/function: PF07411 DUF1508 [H]
EC number: NA
Molecular weight: Translated: 12277; Mature: 12146
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGWYELSKSSNGQYKFVLKAANAETILTSELYTSRTAAENGIASVQTNSPLDERYEKKS CCCCCCCCCCCCCCEEEEEEECCCCEEEHHHHHHHHHCCCCCCEEEECCCCHHHHHHHCC TKDGHPYFNLKAANHQIIGSSESYSSDAACAKGIASVKANGPSKVIKDKTLPVL CCCCCCEEEEEECCEEEECCCCCCCCCHHHHHHHHHCCCCCCCCHHCCCCCCCC >Mature Secondary Structure SGWYELSKSSNGQYKFVLKAANAETILTSELYTSRTAAENGIASVQTNSPLDERYEKKS CCCCCCCCCCCCCEEEEEEECCCCEEEHHHHHHHHHCCCCCCEEEECCCCHHHHHHHCC TKDGHPYFNLKAANHQIIGSSESYSSDAACAKGIASVKANGPSKVIKDKTLPVL CCCCCCEEEEEECCEEEECCCCCCCCCHHHHHHHHHCCCCCCCCHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]