Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
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Accession | NC_007492 |
Length | 6,438,405 |
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The map label for this gene is 77457532
Identifier: 77457532
GI number: 77457532
Start: 1480882
End: 1481526
Strand: Direct
Name: 77457532
Synonym: Pfl01_1305
Alternate gene names: NA
Gene position: 1480882-1481526 (Clockwise)
Preceding gene: 77457531
Following gene: 77457533
Centisome position: 23.0
GC content: 61.71
Gene sequence:
>645_bases ATGATCCGCTTTTTCGCTGTCCTGACCCTGCTGCTCGGCTTGAGCGGCTGCTATAGCCTGTCTCCTACAAAAATCGATGA TGAACTCGCACCGAGTGCCGATTCCGGCACGGCGTATCTGGTGGGTGTGGTTGGCATCTGGCCGAAAGCGGCCTATGCAG CCCAGGAACAGATGCTGCTGATCCGCAAGCGTGGCAGCGACGAGTTCGCCAGTGCGCGCCTGCACAACGAGTTCTATGCC CGCACGGCACGGGACGTGCGCGAGACCGGCCGTGGTATCGGCACGCTGTTCGTGATGCCGCTCAAACCCGGACGCTACGA GATCTACAACGTGCGATTCGATCGCGGCAGATCGGTGTCCTGGAGCCGTGAAGACTTCACCATCGGCATGCAGCTCGAGG CGGGTAAGGCTTATTACATCGGTGACTTCCGCGCCGGCTGCGTGTCCCCCAGCGACAGCACCTGCCTGTTCCTGCACAGC GATCACCTCGAACGCGACGCCGCGCTGGTCCGCGCCGGGTATCCGCAAGTGCCCGGTCTGCAACGTCTGGACATGCCGAA CCTGTACACCGCCACTCCGTTCATTCGCGAAGAGAACGGCACCAGCGCCTCCGTCTACAAAGCCATGCTCTCGGGGAAAT TCTGA
Upstream 100 bases:
>100_bases CCATCATTTCGCTTATCCTCCGCCGCCAATCCATGGAAGGGGCGCCGAGATGACTCTTTCGCGGATTTTTTGAACAACCG CTGCCAGAGTTTTCCTGCCA
Downstream 100 bases:
>100_bases TGCTCATCAAACGTCTGCTTCTGGGTTTGCTTCTGCTGCTCGGCGGTTGCCAGGCCACTCATTCGCTGAAAGCGCCGGAT GTCGATTACAGCAGCCAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 214; Mature: 214
Protein sequence:
>214_residues MIRFFAVLTLLLGLSGCYSLSPTKIDDELAPSADSGTAYLVGVVGIWPKAAYAAQEQMLLIRKRGSDEFASARLHNEFYA RTARDVRETGRGIGTLFVMPLKPGRYEIYNVRFDRGRSVSWSREDFTIGMQLEAGKAYYIGDFRAGCVSPSDSTCLFLHS DHLERDAALVRAGYPQVPGLQRLDMPNLYTATPFIREENGTSASVYKAMLSGKF
Sequences:
>Translated_214_residues MIRFFAVLTLLLGLSGCYSLSPTKIDDELAPSADSGTAYLVGVVGIWPKAAYAAQEQMLLIRKRGSDEFASARLHNEFYA RTARDVRETGRGIGTLFVMPLKPGRYEIYNVRFDRGRSVSWSREDFTIGMQLEAGKAYYIGDFRAGCVSPSDSTCLFLHS DHLERDAALVRAGYPQVPGLQRLDMPNLYTATPFIREENGTSASVYKAMLSGKF >Mature_214_residues MIRFFAVLTLLLGLSGCYSLSPTKIDDELAPSADSGTAYLVGVVGIWPKAAYAAQEQMLLIRKRGSDEFASARLHNEFYA RTARDVRETGRGIGTLFVMPLKPGRYEIYNVRFDRGRSVSWSREDFTIGMQLEAGKAYYIGDFRAGCVSPSDSTCLFLHS DHLERDAALVRAGYPQVPGLQRLDMPNLYTATPFIREENGTSASVYKAMLSGKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23757; Mature: 23757
Theoretical pI: Translated: 8.43; Mature: 8.43
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRFFAVLTLLLGLSGCYSLSPTKIDDELAPSADSGTAYLVGVVGIWPKAAYAAQEQMLL CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHEEE IRKRGSDEFASARLHNEFYARTARDVRETGRGIGTLFVMPLKPGRYEIYNVRFDRGRSVS EEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCEEEEEEEECCCCCCC WSREDFTIGMQLEAGKAYYIGDFRAGCVSPSDSTCLFLHSDHLERDAALVRAGYPQVPGL CCCCCEEEEEEEECCCEEEEECCCCCCCCCCCCEEEEEECCCCCHHHHHHCCCCCCCCCC QRLDMPNLYTATPFIREENGTSASVYKAMLSGKF CCCCCCCCEECCCEEECCCCCHHHHHHHHHCCCC >Mature Secondary Structure MIRFFAVLTLLLGLSGCYSLSPTKIDDELAPSADSGTAYLVGVVGIWPKAAYAAQEQMLL CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHEEE IRKRGSDEFASARLHNEFYARTARDVRETGRGIGTLFVMPLKPGRYEIYNVRFDRGRSVS EEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCEEEEEEEECCCCCCC WSREDFTIGMQLEAGKAYYIGDFRAGCVSPSDSTCLFLHSDHLERDAALVRAGYPQVPGL CCCCCEEEEEEEECCCEEEEECCCCCCCCCCCCEEEEEECCCCCHHHHHHCCCCCCCCCC QRLDMPNLYTATPFIREENGTSASVYKAMLSGKF CCCCCCCCEECCCEEECCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA