Click here to switch to the map view.

The map label for this gene is stfE [H]

Identifier: 77457370

GI number: 77457370

Start: 1318538

End: 1320991

Strand: Direct

Name: stfE [H]

Synonym: Pfl01_1143

Alternate gene names: 77457370

Gene position: 1318538-1320991 (Clockwise)

Preceding gene: 77457369

Following gene: 77457371

Centisome position: 20.48

GC content: 59.09

Gene sequence:

>2454_bases
ATGGCTGACTATTACACCCTGCTCACCAACGCAGGGATTGCCTACGAAACCGCCTGCAAGGCAGCGGGCGTACCGATCAA
GCTGACGCAGATTTCCGTCGGCGATGGCGGCGGCGCGGTCTACAACCCGGCCGCGACGGCTACCGCGCTGAAACGCGAAG
TCTGGCGCGGACCGCTCAATGCGCTGTTCCAGGACGAGAAAAATCCGAGCTGGCTGCTCGCCGAAGTCACCATCCCGCCG
GACGTCGGCGGCTGGTACGTGCGTGAAGCCGGTCTGTGGACCGACACCGGGATTCTCTACGCCATCGTCAAATACCCGGA
ATCGTTCAAACCGGTTCTGGCAACGTCCGGCTCGGGCAAAGAGTTTTATATCCGCTCGATTTTCGAGACCAGCAATGCCT
CGCTGGTGACGCTGCTGATCGACGACACCGTGGTCAAGGCCACTCGTGCGTGGGTCATGAGCTACCTCGCCGAAGAACTC
GGCAAACTCGACGGCAAGCAATCGGTACGTGTCGCCGCCAACGCCAACGTCGTGTTGAACGGTGCGCAGCAGATCGACGG
CGTGGCGGTGATTGCCGGCGACCGCGTGCTGCTGCCGAACCAGACCCTGGCCAAGGACAACGGCCTGTGGATCGTCGCCA
ACGGTGACTGGATTCGGGCCAACGATGCCAACGTCAGCGCCAAGGTCACACCGGGCCTGACGGTGATGGTGGAGGAGGGT
ACGCTCAACGGCGATTCGCTGTGGCACCTGACCACCAATGCGCCGATTACTCTTGGCACAACCGCGCTGACATTCAAGAT
GCTGGCAGGGCGCACCGGGATTGCCGCCGGCACCTACAAAAGTCTGAGCGTCGACGAATACGGCCGCGCGACGGCCGGCT
CGAATCCTGACACGCTGGCCGGTTTTGGCATCAAGGATTCGTACACCAAGGCTGAAGTCGAGGCGCTGATTGCCAAGGCA
TCGGCGTTGCCGGTGGGGTCGATTGTCGCGTTCCCGGTTGACTCGCCACCTCCGGGCTTTCTGGAGCTGGACAACAGCGT
CAAGAGCAGCGCGACCTACCCGGACTTGAGCGCCTATCTGGGCGGCAAGTTCAACAAGGGGGATGAGGGTGTCGGGAATT
TCCGGTTGCCTGAGGCACGTGGGGAGTTTTTGCGCGGTTGGGATCATGGGCGTGGGGTAGATGGCGGACGTGCTCAAGGA
AGTTCTCAGACGGATAGTCTGAAGGCTCACTACCATTTAATTCCGACAGGCTCGGGAGGTGGACAGGCCGTTGACCCGAA
TGGAGAGATTCCGACAGTAGTGTTGAAGGATACGGCTGCTGACTGGGTATTGCGTACGGAAGGTGACAATGCTGAGCTGA
GTATCGGTCGTGTAAGAACCTATAACTTCGGCGCCGCTACAGAAACCCGCCCCCGCAACATCGCCGTCATGTGGTGCATC
AAGGCCTGGAACGCCCCGGTCAATCAGGGAAACATCGACGTAGCGGCACTGGTCAAGGAAGTCTCGCGGCTCGGATCTGC
CGTTCCGGTAGGTGCCGTCATGGCGTTCCCGACGGGGATAGTGCCTCCTGGCTTTCTTGAGCTGAATGGCAGTGTGCAGA
ACACTTCGACTTATCCGGATTTGGCGGCATATCTCGGCACCACTTACAACAAAGGTGATGAGGGTGCAGGCAACTTCCGG
TTGCCGGAGTCTCGCGGTGAGTTCCTGCGAGGCTGGGATCATGGGCGCGGTGTGGATGCAGGACGTGGGATAGGTACGAA
TCAAGGCCAGTCGATGGTCGATCACTACCACACGGTTCTGACTGCCGATGCCGGAGGAGTGCTTAATCCCATTGCTGGCA
ATCTGGTAGGTAGCTTTACCAACTTGGCGCCGATCTCCAAGCCAGCGGGAGCCGGGGTACTGGGGGCAACGCTCACCTCA
AGTATTCACGGTCCGGCAGCGGAAAAAGGTGGCACTGAAACGCGTCCACGCAACCTGGCGGTCATGTGGTGCATCAAAGC
CTGGAACGCGCCGATCAATCAGGGAAATATTGATATCGCAGCGCTTGCCGTGCTCGCACAGCAAGCTTCTGAAACCAATC
AAGGCACAGCAAAAGTTGCCACCCAGGCGCAAACCAATGCCGGTGCCGATGACAGCGTCATTGTCACGCCGAAAAAATTG
ACGTGGGGCTTTCAGTTTCAGAAAAGCGGCATCGGTTACTGCGTTTTTCCGTCCTGGCTGGGTGGATTCATTATTCAGTG
GGGGGTGTACACCATCGTCTCCAGTACGACTGACCAAACAATCGCTTTTCCTCTCACGTTTCCCTCTACGGCGCTATCAG
CCGTCGCGCTCAGTGACTATACCCCCGGTTCCGGGTCAGTCGGATTCGTTGCGATGGGGGCTCTGAACAAGGCTGGTTTT
ACGGTTCGGTCTTCTTCCGGTACTTCTACTCGATGGCTGGCAGTCGGTTGCTAA

Upstream 100 bases:

>100_bases
TCCGGTGTTCATCGAAGGGCTCGAGACATCCGGCGAGGCCTTCAAGGCGGCGGCGCTGTACACCGTCGAAACATCCACTA
TTTATCCTCAGGGGGCCTGA

Downstream 100 bases:

>100_bases
GGGGAAAACATGACTAACAAATACATGACATTCGATGCGTCCGGGCATATCAAGGAACGCCTGATTCAGGGCGTTTGCGA
CATTCCTGAAGGGGCGTTGC

Product: Phage tail Collar

Products: NA

Alternate protein names: Side tail fiber protein homolog from lambdoid prophage e14 [H]

Number of amino acids: Translated: 817; Mature: 816

Protein sequence:

>817_residues
MADYYTLLTNAGIAYETACKAAGVPIKLTQISVGDGGGAVYNPAATATALKREVWRGPLNALFQDEKNPSWLLAEVTIPP
DVGGWYVREAGLWTDTGILYAIVKYPESFKPVLATSGSGKEFYIRSIFETSNASLVTLLIDDTVVKATRAWVMSYLAEEL
GKLDGKQSVRVAANANVVLNGAQQIDGVAVIAGDRVLLPNQTLAKDNGLWIVANGDWIRANDANVSAKVTPGLTVMVEEG
TLNGDSLWHLTTNAPITLGTTALTFKMLAGRTGIAAGTYKSLSVDEYGRATAGSNPDTLAGFGIKDSYTKAEVEALIAKA
SALPVGSIVAFPVDSPPPGFLELDNSVKSSATYPDLSAYLGGKFNKGDEGVGNFRLPEARGEFLRGWDHGRGVDGGRAQG
SSQTDSLKAHYHLIPTGSGGGQAVDPNGEIPTVVLKDTAADWVLRTEGDNAELSIGRVRTYNFGAATETRPRNIAVMWCI
KAWNAPVNQGNIDVAALVKEVSRLGSAVPVGAVMAFPTGIVPPGFLELNGSVQNTSTYPDLAAYLGTTYNKGDEGAGNFR
LPESRGEFLRGWDHGRGVDAGRGIGTNQGQSMVDHYHTVLTADAGGVLNPIAGNLVGSFTNLAPISKPAGAGVLGATLTS
SIHGPAAEKGGTETRPRNLAVMWCIKAWNAPINQGNIDIAALAVLAQQASETNQGTAKVATQAQTNAGADDSVIVTPKKL
TWGFQFQKSGIGYCVFPSWLGGFIIQWGVYTIVSSTTDQTIAFPLTFPSTALSAVALSDYTPGSGSVGFVAMGALNKAGF
TVRSSSGTSTRWLAVGC

Sequences:

>Translated_817_residues
MADYYTLLTNAGIAYETACKAAGVPIKLTQISVGDGGGAVYNPAATATALKREVWRGPLNALFQDEKNPSWLLAEVTIPP
DVGGWYVREAGLWTDTGILYAIVKYPESFKPVLATSGSGKEFYIRSIFETSNASLVTLLIDDTVVKATRAWVMSYLAEEL
GKLDGKQSVRVAANANVVLNGAQQIDGVAVIAGDRVLLPNQTLAKDNGLWIVANGDWIRANDANVSAKVTPGLTVMVEEG
TLNGDSLWHLTTNAPITLGTTALTFKMLAGRTGIAAGTYKSLSVDEYGRATAGSNPDTLAGFGIKDSYTKAEVEALIAKA
SALPVGSIVAFPVDSPPPGFLELDNSVKSSATYPDLSAYLGGKFNKGDEGVGNFRLPEARGEFLRGWDHGRGVDGGRAQG
SSQTDSLKAHYHLIPTGSGGGQAVDPNGEIPTVVLKDTAADWVLRTEGDNAELSIGRVRTYNFGAATETRPRNIAVMWCI
KAWNAPVNQGNIDVAALVKEVSRLGSAVPVGAVMAFPTGIVPPGFLELNGSVQNTSTYPDLAAYLGTTYNKGDEGAGNFR
LPESRGEFLRGWDHGRGVDAGRGIGTNQGQSMVDHYHTVLTADAGGVLNPIAGNLVGSFTNLAPISKPAGAGVLGATLTS
SIHGPAAEKGGTETRPRNLAVMWCIKAWNAPINQGNIDIAALAVLAQQASETNQGTAKVATQAQTNAGADDSVIVTPKKL
TWGFQFQKSGIGYCVFPSWLGGFIIQWGVYTIVSSTTDQTIAFPLTFPSTALSAVALSDYTPGSGSVGFVAMGALNKAGF
TVRSSSGTSTRWLAVGC
>Mature_816_residues
ADYYTLLTNAGIAYETACKAAGVPIKLTQISVGDGGGAVYNPAATATALKREVWRGPLNALFQDEKNPSWLLAEVTIPPD
VGGWYVREAGLWTDTGILYAIVKYPESFKPVLATSGSGKEFYIRSIFETSNASLVTLLIDDTVVKATRAWVMSYLAEELG
KLDGKQSVRVAANANVVLNGAQQIDGVAVIAGDRVLLPNQTLAKDNGLWIVANGDWIRANDANVSAKVTPGLTVMVEEGT
LNGDSLWHLTTNAPITLGTTALTFKMLAGRTGIAAGTYKSLSVDEYGRATAGSNPDTLAGFGIKDSYTKAEVEALIAKAS
ALPVGSIVAFPVDSPPPGFLELDNSVKSSATYPDLSAYLGGKFNKGDEGVGNFRLPEARGEFLRGWDHGRGVDGGRAQGS
SQTDSLKAHYHLIPTGSGGGQAVDPNGEIPTVVLKDTAADWVLRTEGDNAELSIGRVRTYNFGAATETRPRNIAVMWCIK
AWNAPVNQGNIDVAALVKEVSRLGSAVPVGAVMAFPTGIVPPGFLELNGSVQNTSTYPDLAAYLGTTYNKGDEGAGNFRL
PESRGEFLRGWDHGRGVDAGRGIGTNQGQSMVDHYHTVLTADAGGVLNPIAGNLVGSFTNLAPISKPAGAGVLGATLTSS
IHGPAAEKGGTETRPRNLAVMWCIKAWNAPINQGNIDIAALAVLAQQASETNQGTAKVATQAQTNAGADDSVIVTPKKLT
WGFQFQKSGIGYCVFPSWLGGFIIQWGVYTIVSSTTDQTIAFPLTFPSTALSAVALSDYTPGSGSVGFVAMGALNKAGFT
VRSSSGTSTRWLAVGC

Specific function: Unknown

COG id: COG5301

COG function: function code R; Phage-related tail fibre protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tail fiber family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011083 [H]

Pfam domain/function: PF07484 Collar [H]

EC number: NA

Molecular weight: Translated: 85550; Mature: 85419

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADYYTLLTNAGIAYETACKAAGVPIKLTQISVGDGGGAVYNPAATATALKREVWRGPLN
CCCEEEEHHCCCCEEHHHHHHCCCCEEEEEEEECCCCCEEECCHHHHHHHHHHHHCCHHH
ALFQDEKNPSWLLAEVTIPPDVGGWYVREAGLWTDTGILYAIVKYPESFKPVLATSGSGK
HHHCCCCCCCEEEEEEECCCCCCCEEEEECCCEECCCCEEEEEECCCCCCCEEEECCCCC
EFYIRSIFETSNASLVTLLIDDTVVKATRAWVMSYLAEELGKLDGKQSVRVAANANVVLN
EEEEEEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEE
GAQQIDGVAVIAGDRVLLPNQTLAKDNGLWIVANGDWIRANDANVSAKVTPGLTVMVEEG
CCHHCCCEEEEECCEEECCCCCCCCCCCEEEEECCCEEEECCCCEEEEECCCEEEEEECC
TLNGDSLWHLTTNAPITLGTTALTFKMLAGRTGIAAGTYKSLSVDEYGRATAGSNPDTLA
CCCCCEEEEEECCCCEEECHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCEE
GFGIKDSYTKAEVEALIAKASALPVGSIVAFPVDSPPPGFLELDNSVKSSATYPDLSAYL
ECCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEECCCHHCCCCCCCHHHHH
GGKFNKGDEGVGNFRLPEARGEFLRGWDHGRGVDGGRAQGSSQTDSLKAHYHLIPTGSGG
CCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCC
GQAVDPNGEIPTVVLKDTAADWVLRTEGDNAELSIGRVRTYNFGAATETRPRNIAVMWCI
CCEECCCCCCCEEEEECCCCCEEEEECCCCCEEEEEEEEEEECCCCCCCCCCCEEEEEEE
KAWNAPVNQGNIDVAALVKEVSRLGSAVPVGAVMAFPTGIVPPGFLELNGSVQNTSTYPD
ECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCEEEECCCCCCCCCCHH
LAAYLGTTYNKGDEGAGNFRLPESRGEFLRGWDHGRGVDAGRGIGTNQGQSMVDHYHTVL
HHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHEEE
TADAGGVLNPIAGNLVGSFTNLAPISKPAGAGVLGATLTSSIHGPAAEKGGTETRPRNLA
EECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHCCCCCCCCCCCCCCCCCCEE
VMWCIKAWNAPINQGNIDIAALAVLAQQASETNQGTAKVATQAQTNAGADDSVIVTPKKL
EEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCEEEECCCE
TWGFQFQKSGIGYCVFPSWLGGFIIQWGVYTIVSSTTDQTIAFPLTFPSTALSAVALSDY
EEEEEEECCCCCEEECHHHHHHHHHHHHHEEEEECCCCCEEEEEEECCHHHHHHEEECCC
TPGSGSVGFVAMGALNKAGFTVRSSSGTSTRWLAVGC
CCCCCCEEEEEEECCCCCCEEEECCCCCCEEEEEECC
>Mature Secondary Structure 
ADYYTLLTNAGIAYETACKAAGVPIKLTQISVGDGGGAVYNPAATATALKREVWRGPLN
CCEEEEHHCCCCEEHHHHHHCCCCEEEEEEEECCCCCEEECCHHHHHHHHHHHHCCHHH
ALFQDEKNPSWLLAEVTIPPDVGGWYVREAGLWTDTGILYAIVKYPESFKPVLATSGSGK
HHHCCCCCCCEEEEEEECCCCCCCEEEEECCCEECCCCEEEEEECCCCCCCEEEECCCCC
EFYIRSIFETSNASLVTLLIDDTVVKATRAWVMSYLAEELGKLDGKQSVRVAANANVVLN
EEEEEEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEE
GAQQIDGVAVIAGDRVLLPNQTLAKDNGLWIVANGDWIRANDANVSAKVTPGLTVMVEEG
CCHHCCCEEEEECCEEECCCCCCCCCCCEEEEECCCEEEECCCCEEEEECCCEEEEEECC
TLNGDSLWHLTTNAPITLGTTALTFKMLAGRTGIAAGTYKSLSVDEYGRATAGSNPDTLA
CCCCCEEEEEECCCCEEECHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCEE
GFGIKDSYTKAEVEALIAKASALPVGSIVAFPVDSPPPGFLELDNSVKSSATYPDLSAYL
ECCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEECCCHHCCCCCCCHHHHH
GGKFNKGDEGVGNFRLPEARGEFLRGWDHGRGVDGGRAQGSSQTDSLKAHYHLIPTGSGG
CCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCC
GQAVDPNGEIPTVVLKDTAADWVLRTEGDNAELSIGRVRTYNFGAATETRPRNIAVMWCI
CCEECCCCCCCEEEEECCCCCEEEEECCCCCEEEEEEEEEEECCCCCCCCCCCEEEEEEE
KAWNAPVNQGNIDVAALVKEVSRLGSAVPVGAVMAFPTGIVPPGFLELNGSVQNTSTYPD
ECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCEEEECCCCCCCCCCHH
LAAYLGTTYNKGDEGAGNFRLPESRGEFLRGWDHGRGVDAGRGIGTNQGQSMVDHYHTVL
HHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHEEE
TADAGGVLNPIAGNLVGSFTNLAPISKPAGAGVLGATLTSSIHGPAAEKGGTETRPRNLA
EECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHCCCCCCCCCCCCCCCCCCEE
VMWCIKAWNAPINQGNIDIAALAVLAQQASETNQGTAKVATQAQTNAGADDSVIVTPKKL
EEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCEEEECCCE
TWGFQFQKSGIGYCVFPSWLGGFIIQWGVYTIVSSTTDQTIAFPLTFPSTALSAVALSDY
EEEEEEECCCCCEEECHHHHHHHHHHHHHEEEEECCCCCEEEEEEECCHHHHHHEEECCC
TPGSGSVGFVAMGALNKAGFTVRSSSGTSTRWLAVGC
CCCCCCEEEEEEECCCCCCEEEECCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 3894006; 8905232; 9278503 [H]