| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is 77457369
Identifier: 77457369
GI number: 77457369
Start: 1317902
End: 1318537
Strand: Direct
Name: 77457369
Synonym: Pfl01_1142
Alternate gene names: NA
Gene position: 1317902-1318537 (Clockwise)
Preceding gene: 77457368
Following gene: 77457370
Centisome position: 20.47
GC content: 64.47
Gene sequence:
>636_bases ATGACCGATCAGACACCGCGTCCGACTCTGCTGCCAGACAACAGCTCTGCGCTGGAACGGGCACTCGACATCGGCTTCGG CGCATTGCTTGACCGCATCGCGCCGCCGTTTCCCGAACTGATGAACCCGAGTTCGACGCCGGTCGCCTTCCTGCCGTATC TCGCAGCGGATCGCGGGGTGGCCGAATGGAGCACCGACGCACCGGAAGCGGAAAAACGCCTGACCGTCGAACTGGCCTGG CCCACCGCGCGCCAGGCCGGCACTCGCAAGGCGCTGGAAAACGCTGCCAAGGGTTTGCAGCTCCGGCCGGAAATCCGCGC CTGGTACGAACAGACCCCGCCCGGCGAGCCTTACAGCTTTTCCGTGCGGGCCTTCAGCGAACAACCCTACAGCGAAGAAA TCGACGCCCGTCTCGACCGGCGCCTGGCTGATGCCAAGAGCGAGCGGGACGTGCTGTCGGTGTCGGTAGGGCTTAGCGCC TTCGGCAATCACGTCATCGGCGCCGCGACCTTCTGCGGTGAGTTGACCACGGTCTATCCGGTGTTCATCGAAGGGCTCGA GACATCCGGCGAGGCCTTCAAGGCGGCGGCGCTGTACACCGTCGAAACATCCACTATTTATCCTCAGGGGGCCTGA
Upstream 100 bases:
>100_bases GCGCCGTGCAATTGCAGATTCTTGAACCGCTGGCGCCGATCGTCTGCAGCGCATTTCAAGCGCCGTACTGCACGGTGGTC GAAGTCGAGGTGCAGACACT
Downstream 100 bases:
>100_bases ATGGCTGACTATTACACCCTGCTCACCAACGCAGGGATTGCCTACGAAACCGCCTGCAAGGCAGCGGGCGTACCGATCAA GCTGACGCAGATTTCCGTCG
Product: Phage tail protein I
Products: NA
Alternate protein names: Tail Protein I; Phage Tail Protein; Phage-Related Tail Protein; Bacteriophage P2-Related Tail Formation Protein; Tail Formation-Like Protein; Phage P2 Baseplate Assembly GpI-Like Protein; Bacteriophage Tail Formation Protein I; Phage Tail-Like Protein; Bacteriophage Protein
Number of amino acids: Translated: 211; Mature: 210
Protein sequence:
>211_residues MTDQTPRPTLLPDNSSALERALDIGFGALLDRIAPPFPELMNPSSTPVAFLPYLAADRGVAEWSTDAPEAEKRLTVELAW PTARQAGTRKALENAAKGLQLRPEIRAWYEQTPPGEPYSFSVRAFSEQPYSEEIDARLDRRLADAKSERDVLSVSVGLSA FGNHVIGAATFCGELTTVYPVFIEGLETSGEAFKAAALYTVETSTIYPQGA
Sequences:
>Translated_211_residues MTDQTPRPTLLPDNSSALERALDIGFGALLDRIAPPFPELMNPSSTPVAFLPYLAADRGVAEWSTDAPEAEKRLTVELAW PTARQAGTRKALENAAKGLQLRPEIRAWYEQTPPGEPYSFSVRAFSEQPYSEEIDARLDRRLADAKSERDVLSVSVGLSA FGNHVIGAATFCGELTTVYPVFIEGLETSGEAFKAAALYTVETSTIYPQGA >Mature_210_residues TDQTPRPTLLPDNSSALERALDIGFGALLDRIAPPFPELMNPSSTPVAFLPYLAADRGVAEWSTDAPEAEKRLTVELAWP TARQAGTRKALENAAKGLQLRPEIRAWYEQTPPGEPYSFSVRAFSEQPYSEEIDARLDRRLADAKSERDVLSVSVGLSAF GNHVIGAATFCGELTTVYPVFIEGLETSGEAFKAAALYTVETSTIYPQGA
Specific function: Unknown
COG id: COG4385
COG function: function code R; Bacteriophage P2-related tail formation protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22937; Mature: 22806
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDQTPRPTLLPDNSSALERALDIGFGALLDRIAPPFPELMNPSSTPVAFLPYLAADRGV CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCEEHHHHHHHCCCC AEWSTDAPEAEKRLTVELAWPTARQAGTRKALENAAKGLQLRPEIRAWYEQTPPGEPYSF CCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCEEE SVRAFSEQPYSEEIDARLDRRLADAKSERDVLSVSVGLSAFGNHVIGAATFCGELTTVYP EEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHCCHHHHHHHHHHHHHHHHH VFIEGLETSGEAFKAAALYTVETSTIYPQGA HHHHCCCCCCCHHEEEEEEEEECCEECCCCC >Mature Secondary Structure TDQTPRPTLLPDNSSALERALDIGFGALLDRIAPPFPELMNPSSTPVAFLPYLAADRGV CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCEEHHHHHHHCCCC AEWSTDAPEAEKRLTVELAWPTARQAGTRKALENAAKGLQLRPEIRAWYEQTPPGEPYSF CCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCEEE SVRAFSEQPYSEEIDARLDRRLADAKSERDVLSVSVGLSAFGNHVIGAATFCGELTTVYP EEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHCCHHHHHHHHHHHHHHHHH VFIEGLETSGEAFKAAALYTVETSTIYPQGA HHHHCCCCCCCHHEEEEEEEEECCEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA