| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is 77457371
Identifier: 77457371
GI number: 77457371
Start: 1321001
End: 1321531
Strand: Direct
Name: 77457371
Synonym: Pfl01_1144
Alternate gene names: NA
Gene position: 1321001-1321531 (Clockwise)
Preceding gene: 77457370
Following gene: 77457372
Centisome position: 20.52
GC content: 53.67
Gene sequence:
>531_bases ATGACTAACAAATACATGACATTCGATGCGTCCGGGCATATCAAGGAACGCCTGATTCAGGGCGTTTGCGACATTCCTGA AGGGGCGTTGCGCATCAGTGAAGAACTCTGGATTCAGTCCGCGACCGACACGACTGGACGTTGGTGCCTGATCGACGGAG TCCTTACCCGGGTTTCTGCTGAGGTCAAAGTTGATTTTGCACAGCGGATAGCCGCTGAGCGTTTTCGTCGCGAAAGTTCT GGTGTGCTTTTTGAAGGCTATACAGCCGATACCACACGAGACGGCCAAGCGTTAATTGCCAGTGCAGTCATAGCGGCGTT ACTCGACCCGGCCTACAAGTGCGCCTGGAAGTTTGCTCAGGGATTTGTCGAATTGGAGGCTGCGAAGCTCATTGCACTGG CGACATTGGTTCGCACCCATGTTCAAGATTGTTTTGATCGCGAGCGAGCCCTGTTGTCAGCCGTTGAAGCTGGAGAGTGC ACAGAGGAAATGGTTCTGCAAGGCTGGCCGGATTCAAGCCCGACGCCATAA
Upstream 100 bases:
>100_bases ATTCGTTGCGATGGGGGCTCTGAACAAGGCTGGTTTTACGGTTCGGTCTTCTTCCGGTACTTCTACTCGATGGCTGGCAG TCGGTTGCTAAGGGGAAAAC
Downstream 100 bases:
>100_bases CGTTCCTTTGAATTTCAATTGGCGCCCCGCACCGTCGGGGCGTTTTCTTACCGGTTAAACACCCGCCAAGCCCCTCCCTT TGAGGGGCTTTCCCGTTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 176; Mature: 175
Protein sequence:
>176_residues MTNKYMTFDASGHIKERLIQGVCDIPEGALRISEELWIQSATDTTGRWCLIDGVLTRVSAEVKVDFAQRIAAERFRRESS GVLFEGYTADTTRDGQALIASAVIAALLDPAYKCAWKFAQGFVELEAAKLIALATLVRTHVQDCFDRERALLSAVEAGEC TEEMVLQGWPDSSPTP
Sequences:
>Translated_176_residues MTNKYMTFDASGHIKERLIQGVCDIPEGALRISEELWIQSATDTTGRWCLIDGVLTRVSAEVKVDFAQRIAAERFRRESS GVLFEGYTADTTRDGQALIASAVIAALLDPAYKCAWKFAQGFVELEAAKLIALATLVRTHVQDCFDRERALLSAVEAGEC TEEMVLQGWPDSSPTP >Mature_175_residues TNKYMTFDASGHIKERLIQGVCDIPEGALRISEELWIQSATDTTGRWCLIDGVLTRVSAEVKVDFAQRIAAERFRRESSG VLFEGYTADTTRDGQALIASAVIAALLDPAYKCAWKFAQGFVELEAAKLIALATLVRTHVQDCFDRERALLSAVEAGECT EEMVLQGWPDSSPTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19388; Mature: 19257
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNKYMTFDASGHIKERLIQGVCDIPEGALRISEELWIQSATDTTGRWCLIDGVLTRVSA CCCCEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHH EVKVDFAQRIAAERFRRESSGVLFEGYTADTTRDGQALIASAVIAALLDPAYKCAWKFAQ HHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHH GFVELEAAKLIALATLVRTHVQDCFDRERALLSAVEAGECTEEMVLQGWPDSSPTP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCC >Mature Secondary Structure TNKYMTFDASGHIKERLIQGVCDIPEGALRISEELWIQSATDTTGRWCLIDGVLTRVSA CCCEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHH EVKVDFAQRIAAERFRRESSGVLFEGYTADTTRDGQALIASAVIAALLDPAYKCAWKFAQ HHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHH GFVELEAAKLIALATLVRTHVQDCFDRERALLSAVEAGECTEEMVLQGWPDSSPTP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA