Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
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Accession | NC_007492 |
Length | 6,438,405 |
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The map label for this gene is cdsA [H]
Identifier: 77457333
GI number: 77457333
Start: 1279129
End: 1279935
Strand: Direct
Name: cdsA [H]
Synonym: Pfl01_1106
Alternate gene names: 77457333
Gene position: 1279129-1279935 (Clockwise)
Preceding gene: 77457332
Following gene: 77457334
Centisome position: 19.87
GC content: 60.47
Gene sequence:
>807_bases ATGCTTAAACAACGCATCATCACTGCACTGATTCTGTTGCCGATCGCTCTGGGCGGATTTTTCCTGCTCGAGGGTTCCGG TTTTGCCCTGTTCATCGGTCTGGTCGTGAGTCTGGGTGCCTGGGAGTGGGCGCGTCTGGCCGGTTTCACCGCGCAGGCAT TTCGTGTCGGCTACGCGGCGGTCGTCGCGCTGATGCTGTTTGTCATGTATATCCTTCCGGGGCTGGCGCCTTGGGTGCTG GGTGCTTCGGTAATCTGGTGGGCATTGGCGACCTGGCTGGTGCTGACGTACCCGCGTTCCAGCGAGCGCTGGTCCAGTGC CGCCAGCAAACTGGTGATTGGTTTGCTGATTCTGTTGCCCGCCTGGCAGGGGTTGGTGCTGATCAAGCAGTACCCGCTCG GTAACTGGTTGATCATGGCGGTGATGGTGCTGGTCTGGGGGGCTGATATCGGGGCGTACTTCTCCGGTCGTGCATTCGGC AAGCGCAAGCTGGCGCCGCAAGTCAGTCCCGGCAAAAGTTGGGAAGGCGTGTATGGCGGTCTGGCGCTGAGCCTGGTCAT CACCACGCTGGTCGCACTGTTCCGTGACTGGACGGTGGCGCAACTGTTCAAGGGGTTGATCGGTGCAGCGGTGATTGTCT TCATCTCTGTGGTGGGTGATCTGACCGAAAGCATGTTCAAGCGCCAGTCCGGCATCAAGGACAGCAGTAATCTGCTGCCG GGGCATGGTGGCGTGCTGGATCGCATCGACAGTCTGACGGCGGCGATCCCGGTCTTTGCGGTGCTGTTGTGGATGGCGGC ATCGTGA
Upstream 100 bases:
>100_bases TCAAACACGAAGCCATGCGCAATGCGCTGGTCGATTTCGCTTTGCGCCAGCGTCGCTTCGGTAAAACGAGCGAGCAGGTC GAAGCTGGAGCCCGGGTTTA
Downstream 100 bases:
>100_bases GTCGCCCACAGCAGATTACCGTCCTGGGCGCGACCGGATCGATCGGTCTGAGTACGCTGGACGTTATCGCCCGGCATCCG GATCGTTATCAGGCTTTCGC
Product: phosphatidate cytidylyltransferase
Products: NA
Alternate protein names: CDP-DAG synthase; CDP-DG synthase; CDP-diacylglycerol synthase; CDS; CDP-diglyceride pyrophosphorylase; CDP-diglyceride synthase; CTP:phosphatidate cytidylyltransferase [H]
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MLKQRIITALILLPIALGGFFLLEGSGFALFIGLVVSLGAWEWARLAGFTAQAFRVGYAAVVALMLFVMYILPGLAPWVL GASVIWWALATWLVLTYPRSSERWSSAASKLVIGLLILLPAWQGLVLIKQYPLGNWLIMAVMVLVWGADIGAYFSGRAFG KRKLAPQVSPGKSWEGVYGGLALSLVITTLVALFRDWTVAQLFKGLIGAAVIVFISVVGDLTESMFKRQSGIKDSSNLLP GHGGVLDRIDSLTAAIPVFAVLLWMAAS
Sequences:
>Translated_268_residues MLKQRIITALILLPIALGGFFLLEGSGFALFIGLVVSLGAWEWARLAGFTAQAFRVGYAAVVALMLFVMYILPGLAPWVL GASVIWWALATWLVLTYPRSSERWSSAASKLVIGLLILLPAWQGLVLIKQYPLGNWLIMAVMVLVWGADIGAYFSGRAFG KRKLAPQVSPGKSWEGVYGGLALSLVITTLVALFRDWTVAQLFKGLIGAAVIVFISVVGDLTESMFKRQSGIKDSSNLLP GHGGVLDRIDSLTAAIPVFAVLLWMAAS >Mature_268_residues MLKQRIITALILLPIALGGFFLLEGSGFALFIGLVVSLGAWEWARLAGFTAQAFRVGYAAVVALMLFVMYILPGLAPWVL GASVIWWALATWLVLTYPRSSERWSSAASKLVIGLLILLPAWQGLVLIKQYPLGNWLIMAVMVLVWGADIGAYFSGRAFG KRKLAPQVSPGKSWEGVYGGLALSLVITTLVALFRDWTVAQLFKGLIGAAVIVFISVVGDLTESMFKRQSGIKDSSNLLP GHGGVLDRIDSLTAAIPVFAVLLWMAAS
Specific function: Phospholipid biosynthesis. [C]
COG id: COG0575
COG function: function code I; CDP-diglyceride synthetase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDS family [H]
Homologues:
Organism=Escherichia coli, GI87081696, Length=280, Percent_Identity=45.7142857142857, Blast_Score=204, Evalue=5e-54, Organism=Escherichia coli, GI1787677, Length=111, Percent_Identity=41.4414414414414, Blast_Score=89, Evalue=3e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000374 [H]
Pfam domain/function: PF01148 CTP_transf_1 [H]
EC number: =2.7.7.41 [H]
Molecular weight: Translated: 28896; Mature: 28896
Theoretical pI: Translated: 10.45; Mature: 10.45
Prosite motif: PS01315 CDS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKQRIITALILLPIALGGFFLLEGSGFALFIGLVVSLGAWEWARLAGFTAQAFRVGYAA CCHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHH VVALMLFVMYILPGLAPWVLGASVIWWALATWLVLTYPRSSERWSSAASKLVIGLLILLP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH AWQGLVLIKQYPLGNWLIMAVMVLVWGADIGAYFSGRAFGKRKLAPQVSPGKSWEGVYGG HCCCEEEEEECCCCHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHH LALSLVITTLVALFRDWTVAQLFKGLIGAAVIVFISVVGDLTESMFKRQSGIKDSSNLLP HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC GHGGVLDRIDSLTAAIPVFAVLLWMAAS CCCHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLKQRIITALILLPIALGGFFLLEGSGFALFIGLVVSLGAWEWARLAGFTAQAFRVGYAA CCHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHH VVALMLFVMYILPGLAPWVLGASVIWWALATWLVLTYPRSSERWSSAASKLVIGLLILLP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH AWQGLVLIKQYPLGNWLIMAVMVLVWGADIGAYFSGRAFGKRKLAPQVSPGKSWEGVYGG HCCCEEEEEECCCCHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHH LALSLVITTLVALFRDWTVAQLFKGLIGAAVIVFISVVGDLTESMFKRQSGIKDSSNLLP HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC GHGGVLDRIDSLTAAIPVFAVLLWMAAS CCCHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8654980; 10984043 [H]