| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is prpB [C]
Identifier: 77457301
GI number: 77457301
Start: 1242762
End: 1243598
Strand: Direct
Name: prpB [C]
Synonym: Pfl01_1074
Alternate gene names: 77457301
Gene position: 1242762-1243598 (Clockwise)
Preceding gene: 77457300
Following gene: 77457302
Centisome position: 19.3
GC content: 64.28
Gene sequence:
>837_bases ATGGACGCTCAAGCCCGTCAACAACTAGCCCGTAAAGCCGAAGCCTTCAAAGCCCTGCACGAACGCCCCGGGATTTTCGT GATTCCCAATCCATGGGATGCCGGTTCCGCGAAGATGCTCGCCAGTCTCGGCTATCAGGCGCTGGCGACCACCAGCGCCG GCTATGCGTTTTCCCAGGGCAATCCCGATGGCGGCCTGAGCCTCGACGATACCCTGGCCAATGTCCGGGCGATTGTCGCG GCCACCGATCTGCCGGTGGCGGTGGATCTGGAAAACGGTTTCGCCGACGCCCCGGCCGAATCGGCGCAGAGTCTGATCCG CGCCGCCGAGGCGGGCGCTGTGGGCGGCTCGATCGAAGATGCCACCGGCCGGGAAGACTCACCGATCTACTGTTTCGAAC ACGCTGTGGCGCGGATCGAAACCGCCGTCGCTGCCGTGCGCACCTTGCCGTTTCCCTTCACCTTGACGGCCCGTGCGGAA AACTACCTGCACGGCAATCCCGATCTCAACGACACCCTCCGCCGTCTGCAGGCCTTTGCCGAAGCCGGCGCCGACGTGCT GTACGCGCCGGGCCTGCGCACCGCCGAAGAAGTTCTGGCGGTGGTGCGCGCGGTGGCGCCGAAACCGGTCAATGTGTTGA TGTCCGGCGGCTTGAAGCTGACGGTGCAGCAGCTCGAGGAAATGGGCGTGAAGCGGATCAGCACCGGTTCGGCGCTGGCC CTGGCGGCGTTCGGCGAGTTTTTCCGCGCGGCTGAAGAAATCCAGCAATCCGGCACGTTCACCTTCACTTCCCGCTCGAT GCCGTACGCCAAGGCCAATCAATTCTTCAAGGGATGA
Upstream 100 bases:
>100_bases TGCCTGGCCTGCCGTCCCTGCCTGAGCTATACAGAGAACCCGCCGCCGAGCAACTTGGCCTGCTCTGAGGCGGATTTCTT TCCTGCCCAGGAGCCTGCCG
Downstream 100 bases:
>100_bases GCATGGGGCGCTGGCTACTGTTGGCGGGGCTGCTGATCATCGGTGGCGGCCTGATCGGCGTCTGGCGCGGCTGGCTCGAT GTGCCGCCGCGGTGGAATCC
Product: carboxyvinyl-carboxyphosphonate phosphorylmutase
Products: Pyruvate; Succinate [C]
Alternate protein names: NA
Number of amino acids: Translated: 278; Mature: 278
Protein sequence:
>278_residues MDAQARQQLARKAEAFKALHERPGIFVIPNPWDAGSAKMLASLGYQALATTSAGYAFSQGNPDGGLSLDDTLANVRAIVA ATDLPVAVDLENGFADAPAESAQSLIRAAEAGAVGGSIEDATGREDSPIYCFEHAVARIETAVAAVRTLPFPFTLTARAE NYLHGNPDLNDTLRRLQAFAEAGADVLYAPGLRTAEEVLAVVRAVAPKPVNVLMSGGLKLTVQQLEEMGVKRISTGSALA LAAFGEFFRAAEEIQQSGTFTFTSRSMPYAKANQFFKG
Sequences:
>Translated_278_residues MDAQARQQLARKAEAFKALHERPGIFVIPNPWDAGSAKMLASLGYQALATTSAGYAFSQGNPDGGLSLDDTLANVRAIVA ATDLPVAVDLENGFADAPAESAQSLIRAAEAGAVGGSIEDATGREDSPIYCFEHAVARIETAVAAVRTLPFPFTLTARAE NYLHGNPDLNDTLRRLQAFAEAGADVLYAPGLRTAEEVLAVVRAVAPKPVNVLMSGGLKLTVQQLEEMGVKRISTGSALA LAAFGEFFRAAEEIQQSGTFTFTSRSMPYAKANQFFKG >Mature_278_residues MDAQARQQLARKAEAFKALHERPGIFVIPNPWDAGSAKMLASLGYQALATTSAGYAFSQGNPDGGLSLDDTLANVRAIVA ATDLPVAVDLENGFADAPAESAQSLIRAAEAGAVGGSIEDATGREDSPIYCFEHAVARIETAVAAVRTLPFPFTLTARAE NYLHGNPDLNDTLRRLQAFAEAGADVLYAPGLRTAEEVLAVVRAVAPKPVNVLMSGGLKLTVQQLEEMGVKRISTGSALA LAAFGEFFRAAEEIQQSGTFTFTSRSMPYAKANQFFKG
Specific function: Catalyzes The Formation Of Pyruvate And Succinate From 2-Methylisocitrate (By Similarity). [C]
COG id: COG2513
COG function: function code G; PEP phosphonomutase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786525, Length=286, Percent_Identity=30.4195804195804, Blast_Score=72, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR015813 [H]
Pfam domain/function: NA
EC number: 4.1.3.30 [C]
Molecular weight: Translated: 29379; Mature: 29379
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAQARQQLARKAEAFKALHERPGIFVIPNPWDAGSAKMLASLGYQALATTSAGYAFSQG CCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHCHHHHHHCCCCCEECCC NPDGGLSLDDTLANVRAIVAATDLPVAVDLENGFADAPAESAQSLIRAAEAGAVGGSIED CCCCCCCHHHHHHHHHHHEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC ATGREDSPIYCFEHAVARIETAVAAVRTLPFPFTLTARAENYLHGNPDLNDTLRRLQAFA CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHH EAGADVLYAPGLRTAEEVLAVVRAVAPKPVNVLMSGGLKLTVQQLEEMGVKRISTGSALA HCCCCEEECCCCCCHHHHHHHHHHHCCCCHHHHHCCCCEEHHHHHHHCCHHEECCCCHHH LAAFGEFFRAAEEIQQSGTFTFTSRSMPYAKANQFFKG HHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHCCC >Mature Secondary Structure MDAQARQQLARKAEAFKALHERPGIFVIPNPWDAGSAKMLASLGYQALATTSAGYAFSQG CCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHCHHHHHHCCCCCEECCC NPDGGLSLDDTLANVRAIVAATDLPVAVDLENGFADAPAESAQSLIRAAEAGAVGGSIED CCCCCCCHHHHHHHHHHHEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC ATGREDSPIYCFEHAVARIETAVAAVRTLPFPFTLTARAENYLHGNPDLNDTLRRLQAFA CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHH EAGADVLYAPGLRTAEEVLAVVRAVAPKPVNVLMSGGLKLTVQQLEEMGVKRISTGSALA HCCCCEEECCCCCCHHHHHHHHHHHCCCCHHHHHCCCCEEHHHHHHHCCHHEECCCCHHH LAAFGEFFRAAEEIQQSGTFTFTSRSMPYAKANQFFKG HHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: methylisocitrate [C]
Specific reaction: methylisocitrate <==> Pyruvate + Succinate [C]
General reaction: Elimination [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]