| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is yecE [H]
Identifier: 77457300
GI number: 77457300
Start: 1241869
End: 1242729
Strand: Direct
Name: yecE [H]
Synonym: Pfl01_1073
Alternate gene names: 77457300
Gene position: 1241869-1242729 (Clockwise)
Preceding gene: 77457299
Following gene: 77457301
Centisome position: 19.29
GC content: 61.32
Gene sequence:
>861_bases ATGGATCTGCCTTACTACCTCGGTTGCCCGTCCTGGAGCGAAAACGCCTGGCGCGAGTACCTGTATCCGGTAGACGCCAA GACCTCCGATTTGCTCGGACTCTATTCGCAAGTATTCAACGCCGTGGAAGGCAACACGACCTTCTACGCCAGCCCGTCGC CGGCCACCGTGCAGCGCTGGGCCGAGGTGATGCCGGAACACTTTCGCTTCACCGCCAAGTTCCCCGGTGACATCAGCCAC AGCGGCGACTTGCGCGATCAACTGACCGCCGCCGAAACCTTCCTCCAGTTGCTCAAGCCGCTCGGTGAGCGTGTCTCGCC AATGTGGCTGCAACTGTCGAAAAGCTTCACGCCACACCGCTTGCCGGAGCTTGCTGCGTTCATCGATGCGCTGGATTGCC CGCTGGCGGTGGAAGTGCGCCACGAACAATTCTTCGCCAAGGGCGAGAGTGAGCGACTGCTCAACCGGCTGTTGCTGGAT CGCGGCGTGGAGCGTATCTGTCTTGATCCCCGCGCGTTGTTCAGTTGCCTGTCCACCGAATCGTCGGTGATCCACGCCCA ATCGAAAAAGCCCCGCGTACCGACGCGGCCGGCAGCGTTCACTCAATTCCCGCAGGTGCGCTTCATTGGCCATCCGGAGC TTGAGGCCAACGATCCGTTTCTGGTGCCGTGGGTGGCGAAGATCGCCGAGTGGATCGAAGAGGGGCGCACGCCGTACATC TTCCTGCACACCGCCGACAACATTCTTGCGGCGAAGCTGGCGCAACGTTTTCACGCACAACTGATGCAACGTTTGCCTGG CCTGCCGTCCCTGCCTGAGCTATACAGAGAACCCGCCGCCGAGCAACTTGGCCTGCTCTGA
Upstream 100 bases:
>100_bases CGATGAAGAAAAGCGTGGCCATGGCCTTGGCCAGCTACCTGAGCACCGCCGGTTTTGTCGATTGGGATGCAGACGTGCTG GGCCTTGATCTGTACATCTG
Downstream 100 bases:
>100_bases GGCGGATTTCTTTCCTGCCCAGGAGCCTGCCGATGGACGCTCAAGCCCGTCAACAACTAGCCCGTAAAGCCGAAGCCTTC AAAGCCCTGCACGAACGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 286; Mature: 286
Protein sequence:
>286_residues MDLPYYLGCPSWSENAWREYLYPVDAKTSDLLGLYSQVFNAVEGNTTFYASPSPATVQRWAEVMPEHFRFTAKFPGDISH SGDLRDQLTAAETFLQLLKPLGERVSPMWLQLSKSFTPHRLPELAAFIDALDCPLAVEVRHEQFFAKGESERLLNRLLLD RGVERICLDPRALFSCLSTESSVIHAQSKKPRVPTRPAAFTQFPQVRFIGHPELEANDPFLVPWVAKIAEWIEEGRTPYI FLHTADNILAAKLAQRFHAQLMQRLPGLPSLPELYREPAAEQLGLL
Sequences:
>Translated_286_residues MDLPYYLGCPSWSENAWREYLYPVDAKTSDLLGLYSQVFNAVEGNTTFYASPSPATVQRWAEVMPEHFRFTAKFPGDISH SGDLRDQLTAAETFLQLLKPLGERVSPMWLQLSKSFTPHRLPELAAFIDALDCPLAVEVRHEQFFAKGESERLLNRLLLD RGVERICLDPRALFSCLSTESSVIHAQSKKPRVPTRPAAFTQFPQVRFIGHPELEANDPFLVPWVAKIAEWIEEGRTPYI FLHTADNILAAKLAQRFHAQLMQRLPGLPSLPELYREPAAEQLGLL >Mature_286_residues MDLPYYLGCPSWSENAWREYLYPVDAKTSDLLGLYSQVFNAVEGNTTFYASPSPATVQRWAEVMPEHFRFTAKFPGDISH SGDLRDQLTAAETFLQLLKPLGERVSPMWLQLSKSFTPHRLPELAAFIDALDCPLAVEVRHEQFFAKGESERLLNRLLLD RGVERICLDPRALFSCLSTESSVIHAQSKKPRVPTRPAAFTQFPQVRFIGHPELEANDPFLVPWVAKIAEWIEEGRTPYI FLHTADNILAAKLAQRFHAQLMQRLPGLPSLPELYREPAAEQLGLL
Specific function: Unknown
COG id: COG1801
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0759 family [H]
Homologues:
Organism=Escherichia coli, GI1788175, Length=271, Percent_Identity=40.2214022140221, Blast_Score=185, Evalue=2e-48,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002763 [H]
Pfam domain/function: PF01904 DUF72 [H]
EC number: NA
Molecular weight: Translated: 32475; Mature: 32475
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLPYYLGCPSWSENAWREYLYPVDAKTSDLLGLYSQVFNAVEGNTTFYASPSPATVQRW CCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHH AEVMPEHFRFTAKFPGDISHSGDLRDQLTAAETFLQLLKPLGERVSPMWLQLSKSFTPHR HHHCHHHHEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCH LPELAAFIDALDCPLAVEVRHEQFFAKGESERLLNRLLLDRGVERICLDPRALFSCLSTE HHHHHHHHHHHCCCEEEEEHHHHHHHCCCHHHHHHHHHHHHCHHHHHCCHHHHHHHHHCC SSVIHAQSKKPRVPTRPAAFTQFPQVRFIGHPELEANDPFLVPWVAKIAEWIEEGRTPYI HHEEECCCCCCCCCCCCCHHHCCCCEEECCCCCCCCCCCEEHHHHHHHHHHHHCCCCCEE FLHTADNILAAKLAQRFHAQLMQRLPGLPSLPELYREPAAEQLGLL EEECCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHCCC >Mature Secondary Structure MDLPYYLGCPSWSENAWREYLYPVDAKTSDLLGLYSQVFNAVEGNTTFYASPSPATVQRW CCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHH AEVMPEHFRFTAKFPGDISHSGDLRDQLTAAETFLQLLKPLGERVSPMWLQLSKSFTPHR HHHCHHHHEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCH LPELAAFIDALDCPLAVEVRHEQFFAKGESERLLNRLLLDRGVERICLDPRALFSCLSTE HHHHHHHHHHHCCCEEEEEHHHHHHHCCCHHHHHHHHHHHHCHHHHHCCHHHHHHHHHCC SSVIHAQSKKPRVPTRPAAFTQFPQVRFIGHPELEANDPFLVPWVAKIAEWIEEGRTPYI HHEEECCCCCCCCCCCCCHHHCCCCEEECCCCCCCCCCCEEHHHHHHHHHHHHCCCCCEE FLHTADNILAAKLAQRFHAQLMQRLPGLPSLPELYREPAAEQLGLL EEECCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]