Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is yecE [H]

Identifier: 77457300

GI number: 77457300

Start: 1241869

End: 1242729

Strand: Direct

Name: yecE [H]

Synonym: Pfl01_1073

Alternate gene names: 77457300

Gene position: 1241869-1242729 (Clockwise)

Preceding gene: 77457299

Following gene: 77457301

Centisome position: 19.29

GC content: 61.32

Gene sequence:

>861_bases
ATGGATCTGCCTTACTACCTCGGTTGCCCGTCCTGGAGCGAAAACGCCTGGCGCGAGTACCTGTATCCGGTAGACGCCAA
GACCTCCGATTTGCTCGGACTCTATTCGCAAGTATTCAACGCCGTGGAAGGCAACACGACCTTCTACGCCAGCCCGTCGC
CGGCCACCGTGCAGCGCTGGGCCGAGGTGATGCCGGAACACTTTCGCTTCACCGCCAAGTTCCCCGGTGACATCAGCCAC
AGCGGCGACTTGCGCGATCAACTGACCGCCGCCGAAACCTTCCTCCAGTTGCTCAAGCCGCTCGGTGAGCGTGTCTCGCC
AATGTGGCTGCAACTGTCGAAAAGCTTCACGCCACACCGCTTGCCGGAGCTTGCTGCGTTCATCGATGCGCTGGATTGCC
CGCTGGCGGTGGAAGTGCGCCACGAACAATTCTTCGCCAAGGGCGAGAGTGAGCGACTGCTCAACCGGCTGTTGCTGGAT
CGCGGCGTGGAGCGTATCTGTCTTGATCCCCGCGCGTTGTTCAGTTGCCTGTCCACCGAATCGTCGGTGATCCACGCCCA
ATCGAAAAAGCCCCGCGTACCGACGCGGCCGGCAGCGTTCACTCAATTCCCGCAGGTGCGCTTCATTGGCCATCCGGAGC
TTGAGGCCAACGATCCGTTTCTGGTGCCGTGGGTGGCGAAGATCGCCGAGTGGATCGAAGAGGGGCGCACGCCGTACATC
TTCCTGCACACCGCCGACAACATTCTTGCGGCGAAGCTGGCGCAACGTTTTCACGCACAACTGATGCAACGTTTGCCTGG
CCTGCCGTCCCTGCCTGAGCTATACAGAGAACCCGCCGCCGAGCAACTTGGCCTGCTCTGA

Upstream 100 bases:

>100_bases
CGATGAAGAAAAGCGTGGCCATGGCCTTGGCCAGCTACCTGAGCACCGCCGGTTTTGTCGATTGGGATGCAGACGTGCTG
GGCCTTGATCTGTACATCTG

Downstream 100 bases:

>100_bases
GGCGGATTTCTTTCCTGCCCAGGAGCCTGCCGATGGACGCTCAAGCCCGTCAACAACTAGCCCGTAAAGCCGAAGCCTTC
AAAGCCCTGCACGAACGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MDLPYYLGCPSWSENAWREYLYPVDAKTSDLLGLYSQVFNAVEGNTTFYASPSPATVQRWAEVMPEHFRFTAKFPGDISH
SGDLRDQLTAAETFLQLLKPLGERVSPMWLQLSKSFTPHRLPELAAFIDALDCPLAVEVRHEQFFAKGESERLLNRLLLD
RGVERICLDPRALFSCLSTESSVIHAQSKKPRVPTRPAAFTQFPQVRFIGHPELEANDPFLVPWVAKIAEWIEEGRTPYI
FLHTADNILAAKLAQRFHAQLMQRLPGLPSLPELYREPAAEQLGLL

Sequences:

>Translated_286_residues
MDLPYYLGCPSWSENAWREYLYPVDAKTSDLLGLYSQVFNAVEGNTTFYASPSPATVQRWAEVMPEHFRFTAKFPGDISH
SGDLRDQLTAAETFLQLLKPLGERVSPMWLQLSKSFTPHRLPELAAFIDALDCPLAVEVRHEQFFAKGESERLLNRLLLD
RGVERICLDPRALFSCLSTESSVIHAQSKKPRVPTRPAAFTQFPQVRFIGHPELEANDPFLVPWVAKIAEWIEEGRTPYI
FLHTADNILAAKLAQRFHAQLMQRLPGLPSLPELYREPAAEQLGLL
>Mature_286_residues
MDLPYYLGCPSWSENAWREYLYPVDAKTSDLLGLYSQVFNAVEGNTTFYASPSPATVQRWAEVMPEHFRFTAKFPGDISH
SGDLRDQLTAAETFLQLLKPLGERVSPMWLQLSKSFTPHRLPELAAFIDALDCPLAVEVRHEQFFAKGESERLLNRLLLD
RGVERICLDPRALFSCLSTESSVIHAQSKKPRVPTRPAAFTQFPQVRFIGHPELEANDPFLVPWVAKIAEWIEEGRTPYI
FLHTADNILAAKLAQRFHAQLMQRLPGLPSLPELYREPAAEQLGLL

Specific function: Unknown

COG id: COG1801

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0759 family [H]

Homologues:

Organism=Escherichia coli, GI1788175, Length=271, Percent_Identity=40.2214022140221, Blast_Score=185, Evalue=2e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002763 [H]

Pfam domain/function: PF01904 DUF72 [H]

EC number: NA

Molecular weight: Translated: 32475; Mature: 32475

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLPYYLGCPSWSENAWREYLYPVDAKTSDLLGLYSQVFNAVEGNTTFYASPSPATVQRW
CCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHH
AEVMPEHFRFTAKFPGDISHSGDLRDQLTAAETFLQLLKPLGERVSPMWLQLSKSFTPHR
HHHCHHHHEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCH
LPELAAFIDALDCPLAVEVRHEQFFAKGESERLLNRLLLDRGVERICLDPRALFSCLSTE
HHHHHHHHHHHCCCEEEEEHHHHHHHCCCHHHHHHHHHHHHCHHHHHCCHHHHHHHHHCC
SSVIHAQSKKPRVPTRPAAFTQFPQVRFIGHPELEANDPFLVPWVAKIAEWIEEGRTPYI
HHEEECCCCCCCCCCCCCHHHCCCCEEECCCCCCCCCCCEEHHHHHHHHHHHHCCCCCEE
FLHTADNILAAKLAQRFHAQLMQRLPGLPSLPELYREPAAEQLGLL
EEECCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHCCC
>Mature Secondary Structure
MDLPYYLGCPSWSENAWREYLYPVDAKTSDLLGLYSQVFNAVEGNTTFYASPSPATVQRW
CCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHH
AEVMPEHFRFTAKFPGDISHSGDLRDQLTAAETFLQLLKPLGERVSPMWLQLSKSFTPHR
HHHCHHHHEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCH
LPELAAFIDALDCPLAVEVRHEQFFAKGESERLLNRLLLDRGVERICLDPRALFSCLSTE
HHHHHHHHHHHCCCEEEEEHHHHHHHCCCHHHHHHHHHHHHCHHHHHCCHHHHHHHHHCC
SSVIHAQSKKPRVPTRPAAFTQFPQVRFIGHPELEANDPFLVPWVAKIAEWIEEGRTPYI
HHEEECCCCCCCCCCCCCHHHCCCCEEECCCCCCCCCCCEEHHHHHHHHHHHHCCCCCEE
FLHTADNILAAKLAQRFHAQLMQRLPGLPSLPELYREPAAEQLGLL
EEECCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]