| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77457302
Identifier: 77457302
GI number: 77457302
Start: 1243601
End: 1244293
Strand: Direct
Name: 77457302
Synonym: Pfl01_1075
Alternate gene names: NA
Gene position: 1243601-1244293 (Clockwise)
Preceding gene: 77457301
Following gene: 77457304
Centisome position: 19.32
GC content: 65.66
Gene sequence:
>693_bases ATGGGGCGCTGGCTACTGTTGGCGGGGCTGCTGATCATCGGTGGCGGCCTGATCGGCGTCTGGCGCGGCTGGCTCGATGT GCCGCCGCGGTGGAATCCGTGGGCGCCGCTGGACGTGCAGGCGACGCCCAACTGGCTCACAGGCTATAAGTTGATGCGTC TGCGTAGCAATCCGCTCTTGTGCGAGCAGGCATTGGGCAGCTCCGGCCTGCGGGTTTCGCCACAGGCCGACAGCCGCGAT GCCAAATGCCCGCTGATGGGTGCTTTGCGCGTGCAGGGCGGCGGGGTGGGGCTCAGCAGCAGCTTTCTCGCCAGTTGCCC GTTGGCCGTGGCGTTCGCGATGTTCGAGCGTCATACGCTGCAACCGGCGGCGCAGTGGGCCTACGGTCAGCCGGTGGCGC GGGTCGATCACCTCGGCAGCTTCGCCTGCCGCAACGTCTACAACCGCGAGAACGGCGCGCTCAGTCGCCACGCCAGCGCC GATGCGCTGGACATTGCCGGCTTCCGTCTGGCGGATGGTCGCGCGATCAGCGTACTCAAGGACTGGCCGAAGCAAAATCA AGACGCGCAGTTTCTACGTCAGGTGCGCGATGGTGCCTGCGAGTCGTTCAGTGTGGTGTTGAGTCCGGATTACAACGCCG CCCATCGCAACCACTTTCATGTCGATGTCGGACGCTGGAGCGTGTGTCGCTGA
Upstream 100 bases:
>100_bases TTTTCCGCGCGGCTGAAGAAATCCAGCAATCCGGCACGTTCACCTTCACTTCCCGCTCGATGCCGTACGCCAAGGCCAAT CAATTCTTCAAGGGATGAGC
Downstream 100 bases:
>100_bases GAAATCAGGCGGCGATGCGCAGGTTCTGCTGAACGATCGGGCGCACCCAGCCGTTATCGAAGTCCAAGGCTTTCTGCTGC TCGACGATGGCTTCCGGCGG
Product: extensin-like protein
Products: NA
Alternate protein names: Extensin-Like Protein; Extensin-Like; Extensin-Like Protein C-Terminus; Extensin Domain Protein; Conserved Protein; Extensin Domain-Containing Protein; Inner Membrane Protein
Number of amino acids: Translated: 230; Mature: 229
Protein sequence:
>230_residues MGRWLLLAGLLIIGGGLIGVWRGWLDVPPRWNPWAPLDVQATPNWLTGYKLMRLRSNPLLCEQALGSSGLRVSPQADSRD AKCPLMGALRVQGGGVGLSSSFLASCPLAVAFAMFERHTLQPAAQWAYGQPVARVDHLGSFACRNVYNRENGALSRHASA DALDIAGFRLADGRAISVLKDWPKQNQDAQFLRQVRDGACESFSVVLSPDYNAAHRNHFHVDVGRWSVCR
Sequences:
>Translated_230_residues MGRWLLLAGLLIIGGGLIGVWRGWLDVPPRWNPWAPLDVQATPNWLTGYKLMRLRSNPLLCEQALGSSGLRVSPQADSRD AKCPLMGALRVQGGGVGLSSSFLASCPLAVAFAMFERHTLQPAAQWAYGQPVARVDHLGSFACRNVYNRENGALSRHASA DALDIAGFRLADGRAISVLKDWPKQNQDAQFLRQVRDGACESFSVVLSPDYNAAHRNHFHVDVGRWSVCR >Mature_229_residues GRWLLLAGLLIIGGGLIGVWRGWLDVPPRWNPWAPLDVQATPNWLTGYKLMRLRSNPLLCEQALGSSGLRVSPQADSRDA KCPLMGALRVQGGGVGLSSSFLASCPLAVAFAMFERHTLQPAAQWAYGQPVARVDHLGSFACRNVYNRENGALSRHASAD ALDIAGFRLADGRAISVLKDWPKQNQDAQFLRQVRDGACESFSVVLSPDYNAAHRNHFHVDVGRWSVCR
Specific function: Unknown
COG id: COG3921
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25216; Mature: 25085
Theoretical pI: Translated: 9.39; Mature: 9.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRWLLLAGLLIIGGGLIGVWRGWLDVPPRWNPWAPLDVQATPNWLTGYKLMRLRSNPLL CCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCEEECCCCCHHHHHEEEEECCCCCH CEQALGSSGLRVSPQADSRDAKCPLMGALRVQGGGVGLSSSFLASCPLAVAFAMFERHTL HHHHCCCCCCEECCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCC QPAAQWAYGQPVARVDHLGSFACRNVYNRENGALSRHASADALDIAGFRLADGRAISVLK CHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCEEECCCCEEHHHH DWPKQNQDAQFLRQVRDGACESFSVVLSPDYNAAHRNHFHVDVGRWSVCR HCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEEECCCEECCC >Mature Secondary Structure GRWLLLAGLLIIGGGLIGVWRGWLDVPPRWNPWAPLDVQATPNWLTGYKLMRLRSNPLL CHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCEEECCCCCHHHHHEEEEECCCCCH CEQALGSSGLRVSPQADSRDAKCPLMGALRVQGGGVGLSSSFLASCPLAVAFAMFERHTL HHHHCCCCCCEECCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCC QPAAQWAYGQPVARVDHLGSFACRNVYNRENGALSRHASADALDIAGFRLADGRAISVLK CHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCEEECCCCEEHHHH DWPKQNQDAQFLRQVRDGACESFSVVLSPDYNAAHRNHFHVDVGRWSVCR HCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEEECCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA