| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is ylaK [H]
Identifier: 77457190
GI number: 77457190
Start: 1124138
End: 1125532
Strand: Direct
Name: ylaK [H]
Synonym: Pfl01_0963
Alternate gene names: 77457190
Gene position: 1124138-1125532 (Clockwise)
Preceding gene: 77457189
Following gene: 77457191
Centisome position: 17.46
GC content: 59.5
Gene sequence:
>1395_bases ATGGATGATCACGGACGTAGCCCTTCCTCCAACCAGCCAATCCTTTATGTACTCGATACCAACGTACTGATTCACGATCC GAACGCCCTGCTGAATTTCGAAGAACACCACGTCGCGATCCCGATGACCGTGCTTGAAGAGCTGGACAAGCTCAAGAGCG GGCATCACAGCGTGGCCGCCGAGTGCCGTCAGGCGATCCGGCTGATCGACAAGACCCTGGGCGATGCCTCACCCGATGAC GTCGAACAGGGCGTGCCGATCCAGCGCGGCAAGGGCGGCCCGAAGGGCTTGCTGTCGATTCTGATGAGCAAACAGGCCGA ATCGAACCTGATTCTGCCCGAGCATCTGAACGACAACAAAATCATCAACCAGCTGATCGACCTGCACACCCGCGAACCGA GCAAACCGGTGGTGCTGGTCACCAAAGACATCAACATGCGCCTCAAGGCGCGCGCCTGCGGGATCGACGCCGAGGACTAC AGCACCGACCAACTGGTCGACGACGTGTCCCTGCTGCCCAACGGCTATCACAACATGACCGGCTCTTTCTGGGACCGCGT GAGCAAGGTCGAAACCCGTCAGGACCACGGCCGCACCTGGCATCAGGTACAGCTGATCGACAACCTGCCTGCCGTGCACA TCAACGAATTCATCATTGATGAGCAGGGCTTCGTCGGCTGGATCAAGGAGATCGAAGAAGACAAGCTGCTGATCCTCGAC CTGCACCAGGAACCGCTGTTGCATCAGGAAGCCTGGGGCCTCAAGCCACGGGACATCTATCAGAGCCTGGCGCTGTATGC GCTGCTGGATCCGGACATTCACCTGGTCAACCTGTCCGGTGCCGCCGGTTCGGGTAAAACCATTCTGGCGCTGGCCGCGG CGATCGAGCAGACCATGGTCAGCAAGCGTTATCGCCGCATCATCGCCACCCGCAGCGTGCAGGGCCTGGACCAGGAAATC GGCTTCCTGCCCGGCACTGAAGCGGAAAAAATGGAGCCGTGGCTGGGCGCCATCACCGACAACCTCGAAGCCTTGCACAT GGATGACGAAAACACCCATGGCAGCGTCGACTACATCCTCAGCAAAGTGCCGTTGCAGTTCAAATCGCTCAACTACATTC GCGGTCGCAGCTTCCAGCAGAGCCTGATCCTGATCGACGAATGCCAGAACCTCACGCCGCACCAGATGAAAACCATCATC ACCCGGGCCGGCGCCGGTTCCAAAGTGGTGTGCCTGGGCAACCTGGCACAGATCGACACCCCTTACCTGTCCGCGACCAG CTCCGGGCTGACCTACCTGACCGAACGCTTCAAGGATTTCCCCAACGGGGTGCATATCACCCTGCAAGGGGTGCCTCGCT CGATCCTGGCCGAATACGCCGAATCGCATCTGTAA
Upstream 100 bases:
>100_bases GCTATCCCGACAAAAGCTGTGCAGGTGGATTCGGCAGTCACTTCGAGGCGCAGCACCGCCGAGGTATTGCGTCGAATGGC TCCCACAAAGGTGACCGAGT
Downstream 100 bases:
>100_bases CCGTCAAACCGAACCGGGCGACTGCAAAGTCGCCCGGTTTTTTATGTGCGCAATTCTGACCCCCAGGTTTACAATCGGTG CTCCTGATCAGGAGTAATCC
Product: PhoH-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 464; Mature: 464
Protein sequence:
>464_residues MDDHGRSPSSNQPILYVLDTNVLIHDPNALLNFEEHHVAIPMTVLEELDKLKSGHHSVAAECRQAIRLIDKTLGDASPDD VEQGVPIQRGKGGPKGLLSILMSKQAESNLILPEHLNDNKIINQLIDLHTREPSKPVVLVTKDINMRLKARACGIDAEDY STDQLVDDVSLLPNGYHNMTGSFWDRVSKVETRQDHGRTWHQVQLIDNLPAVHINEFIIDEQGFVGWIKEIEEDKLLILD LHQEPLLHQEAWGLKPRDIYQSLALYALLDPDIHLVNLSGAAGSGKTILALAAAIEQTMVSKRYRRIIATRSVQGLDQEI GFLPGTEAEKMEPWLGAITDNLEALHMDDENTHGSVDYILSKVPLQFKSLNYIRGRSFQQSLILIDECQNLTPHQMKTII TRAGAGSKVVCLGNLAQIDTPYLSATSSGLTYLTERFKDFPNGVHITLQGVPRSILAEYAESHL
Sequences:
>Translated_464_residues MDDHGRSPSSNQPILYVLDTNVLIHDPNALLNFEEHHVAIPMTVLEELDKLKSGHHSVAAECRQAIRLIDKTLGDASPDD VEQGVPIQRGKGGPKGLLSILMSKQAESNLILPEHLNDNKIINQLIDLHTREPSKPVVLVTKDINMRLKARACGIDAEDY STDQLVDDVSLLPNGYHNMTGSFWDRVSKVETRQDHGRTWHQVQLIDNLPAVHINEFIIDEQGFVGWIKEIEEDKLLILD LHQEPLLHQEAWGLKPRDIYQSLALYALLDPDIHLVNLSGAAGSGKTILALAAAIEQTMVSKRYRRIIATRSVQGLDQEI GFLPGTEAEKMEPWLGAITDNLEALHMDDENTHGSVDYILSKVPLQFKSLNYIRGRSFQQSLILIDECQNLTPHQMKTII TRAGAGSKVVCLGNLAQIDTPYLSATSSGLTYLTERFKDFPNGVHITLQGVPRSILAEYAESHL >Mature_464_residues MDDHGRSPSSNQPILYVLDTNVLIHDPNALLNFEEHHVAIPMTVLEELDKLKSGHHSVAAECRQAIRLIDKTLGDASPDD VEQGVPIQRGKGGPKGLLSILMSKQAESNLILPEHLNDNKIINQLIDLHTREPSKPVVLVTKDINMRLKARACGIDAEDY STDQLVDDVSLLPNGYHNMTGSFWDRVSKVETRQDHGRTWHQVQLIDNLPAVHINEFIIDEQGFVGWIKEIEEDKLLILD LHQEPLLHQEAWGLKPRDIYQSLALYALLDPDIHLVNLSGAAGSGKTILALAAAIEQTMVSKRYRRIIATRSVQGLDQEI GFLPGTEAEKMEPWLGAITDNLEALHMDDENTHGSVDYILSKVPLQFKSLNYIRGRSFQQSLILIDECQNLTPHQMKTII TRAGAGSKVVCLGNLAQIDTPYLSATSSGLTYLTERFKDFPNGVHITLQGVPRSILAEYAESHL
Specific function: Unknown
COG id: COG1875
COG function: function code T; Predicted ATPase related to phosphate starvation-inducible protein PhoH
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PINc domain [H]
Homologues:
Organism=Escherichia coli, GI1787257, Length=166, Percent_Identity=34.9397590361446, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI145693103, Length=187, Percent_Identity=34.7593582887701, Blast_Score=92, Evalue=5e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003714 - InterPro: IPR006596 [H]
Pfam domain/function: PF02562 PhoH [H]
EC number: NA
Molecular weight: Translated: 51723; Mature: 51723
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDHGRSPSSNQPILYVLDTNVLIHDPNALLNFEEHHVAIPMTVLEELDKLKSGHHSVAA CCCCCCCCCCCCCEEEEEECCEEEECCHHHCCCCCCEEEEHHHHHHHHHHHHCCCHHHHH ECRQAIRLIDKTLGDASPDDVEQGVPIQRGKGGPKGLLSILMSKQAESNLILPEHLNDNK HHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHH IINQLIDLHTREPSKPVVLVTKDINMRLKARACGIDAEDYSTDQLVDDVSLLPNGYHNMT HHHHHHHHHCCCCCCCEEEEEECCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCC GSFWDRVSKVETRQDHGRTWHQVQLIDNLPAVHINEFIIDEQGFVGWIKEIEEDKLLILD CHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEHHEEECCCCHHHHHHHCCCCCEEEEE LHQEPLLHQEAWGLKPRDIYQSLALYALLDPDIHLVNLSGAAGSGKTILALAAAIEQTMV CCCCCCHHHHHCCCCHHHHHHHHHHHHEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHH SKRYRRIIATRSVQGLDQEIGFLPGTEAEKMEPWLGAITDNLEALHMDDENTHGSVDYIL HHHHHHHHHHHHHHCHHHHHCCCCCCCHHHHCHHHHHHHCCCEEEECCCCCCCCHHHHHH SKVPLQFKSLNYIRGRSFQQSLILIDECQNLTPHQMKTIITRAGAGSKVVCLGNLAQIDT HHCCCHHHCCHHHCCCCHHHHEEEEEHHCCCCHHHHHHHHHHCCCCCEEEEECCHHHCCC PYLSATSSGLTYLTERFKDFPNGVHITLQGVPRSILAEYAESHL CCHHCCCCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCC >Mature Secondary Structure MDDHGRSPSSNQPILYVLDTNVLIHDPNALLNFEEHHVAIPMTVLEELDKLKSGHHSVAA CCCCCCCCCCCCCEEEEEECCEEEECCHHHCCCCCCEEEEHHHHHHHHHHHHCCCHHHHH ECRQAIRLIDKTLGDASPDDVEQGVPIQRGKGGPKGLLSILMSKQAESNLILPEHLNDNK HHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHH IINQLIDLHTREPSKPVVLVTKDINMRLKARACGIDAEDYSTDQLVDDVSLLPNGYHNMT HHHHHHHHHCCCCCCCEEEEEECCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCC GSFWDRVSKVETRQDHGRTWHQVQLIDNLPAVHINEFIIDEQGFVGWIKEIEEDKLLILD CHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEHHEEECCCCHHHHHHHCCCCCEEEEE LHQEPLLHQEAWGLKPRDIYQSLALYALLDPDIHLVNLSGAAGSGKTILALAAAIEQTMV CCCCCCHHHHHCCCCHHHHHHHHHHHHEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHH SKRYRRIIATRSVQGLDQEIGFLPGTEAEKMEPWLGAITDNLEALHMDDENTHGSVDYIL HHHHHHHHHHHHHHCHHHHHCCCCCCCHHHHCHHHHHHHCCCEEEECCCCCCCCHHHHHH SKVPLQFKSLNYIRGRSFQQSLILIDECQNLTPHQMKTIITRAGAGSKVVCLGNLAQIDT HHCCCHHHCCHHHCCCCHHHHEEEEEHHCCCCHHHHHHHHHHCCCCCEEEEECCHHHCCC PYLSATSSGLTYLTERFKDFPNGVHITLQGVPRSILAEYAESHL CCHHCCCCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]