| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is algG [H]
Identifier: 77457182
GI number: 77457182
Start: 1112357
End: 1113928
Strand: Reverse
Name: algG [H]
Synonym: Pfl01_0955
Alternate gene names: 77457182
Gene position: 1113928-1112357 (Counterclockwise)
Preceding gene: 77457183
Following gene: 77457181
Centisome position: 17.3
GC content: 60.75
Gene sequence:
>1572_bases ATGAACAGTGCCCGCAAAGGCTCACTCAGCCTGCTGGCCGGCGCTATGCTGCTGGCCTCGGCCGGCGCCTTCGCCAGTGT GGAACCCGCCAAACCCGCGACCACCGCCAAGGAGCTGCAACAGGCCAAGACCTACACCGTCAGCAGCGCGCCAACCGAAG CGCTGGAACTGGCCAAGCCGAAATTACCCGACCTCTCCGGCTACACCGCCGAAGCCGCCGCCGCGAAAATCGTGCGCAGC AAACCGGGCAAGATCAGCGTGCGCCGGATGATGCAGGAAGACGCCCTGAAGGACTTCATCGGCGGCGACAACAAGATGGC CGAATGGGTGGTGCGTCAGCACGGCATCCCGCAGGCGATCTTCGTCGACGACGGCTACATGAACCTGAAAGAGCTGGCGC AGAAACTGCCCAAGCAGTACTTCAGCGAAACCTCGCCGGGCGTCTACCTGGCGAAGTTGCCGATCGTGGTCGGCCGTAAA GGCATCCTCGAAATCGACGGCCAGACCCAGGAGCTGCGCCTGTCCCAGGAGGCCGGTTCGTTCCTGGTCAACGACGGCCA GCTGTTCGTGCGTGACACCAAAGTCACCGGCTGGCGCGAGAAGGAAAACGGCCCGGCAACCTTCCGTTCGCCGAAGGAAT TCCGCCCGTTCCTGCTGGCCTGGGGCGGCACCGAGACCTACATCGTCAACAGCAAGATGGCCAGCTTCGGCTACGCCAAC AGTAAGTCATACGGGGTGAGTATTTCCCAGTACACGCCGAACATGGCCAAGGTGCTCAAGCGTCCCGAGCCGACCGGCTG GATCGTCGGCTCCGAGTTCTCGGACATGTGGTACGGCTTCTACTGCTACGAGACCCGCGACTTCGTGGTCAAGGGCAACA CCTACAAGGACAACATCGTCTACGGCATCGACCCGCACGACCGTTCCCACGGACTGATCATTGCCGAGAACACGGTGTAC GGCACGAAGAAGAAGCACGGGATCATCATTTCCCGTGAGGTGAACGACAGCTTCATCTTCAACAACAAAAGCTACGACAA CCACCTCTCGGGGCTGGTGATCGACCGTAACAGCGTCAACAACATCATTGCCTACAACGAGATCTACAAGAACCACACCG ACGGCATCACCCTCTACGAGTCTGCCGACAACCTGCTGTGGGGCAACAAGGTCATCAGCAACAAGCGCCACGGCATCCGT ATTCGTAACAGCGTGAACATTCGCCTCTACGAAAACGTCGCCATGGCCAACGGCCTGACTGGCGTCTACGGGCATATCAA GGATCTGACCGACACCGACCGTGACATCAAGCTCGACCCGTTCGACGCCCAGGTCTCGCTGATCGTGGTCGGCGGTGAAC TGGCGGCCAACGGCAGCGGCCCGCTGTCGATCGATTCGCCCCTGAGTGTCGAGCTGTATCGCGTGTCGATGCTGGCGCCG ACCAAATCCAGCGGCATCAGCTTCAACGGCATCCTCGGCGAGCGCCAGGATGAAATTCTCGACCTGCTGGTGCGCCAGCA GAAAGCCGTGCTGATCGACCCTGTCGAACGCCAGACCGAATTGCAGGACTGA
Upstream 100 bases:
>100_bases CGGGTGATGCCTACGGCAGCCAGGTTGATTCGTACATGCACCGCGCGTTCATCGACGTGATCTGGCGCTTCTGATGCTGA CCGCCAAGGGAGTGCCCGAC
Downstream 100 bases:
>100_bases GGATAATTTTATGCACCCACACCTGATCAAATTACTCAGCCTGTCGGCCCTGACCGTGGGCATCCTGGCGGCCAGCAACG GCGCCCGCGCAGATGAAGTC
Product: carbohydrate binding and sugar hydrolysis
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 523; Mature: 523
Protein sequence:
>523_residues MNSARKGSLSLLAGAMLLASAGAFASVEPAKPATTAKELQQAKTYTVSSAPTEALELAKPKLPDLSGYTAEAAAAKIVRS KPGKISVRRMMQEDALKDFIGGDNKMAEWVVRQHGIPQAIFVDDGYMNLKELAQKLPKQYFSETSPGVYLAKLPIVVGRK GILEIDGQTQELRLSQEAGSFLVNDGQLFVRDTKVTGWREKENGPATFRSPKEFRPFLLAWGGTETYIVNSKMASFGYAN SKSYGVSISQYTPNMAKVLKRPEPTGWIVGSEFSDMWYGFYCYETRDFVVKGNTYKDNIVYGIDPHDRSHGLIIAENTVY GTKKKHGIIISREVNDSFIFNNKSYDNHLSGLVIDRNSVNNIIAYNEIYKNHTDGITLYESADNLLWGNKVISNKRHGIR IRNSVNIRLYENVAMANGLTGVYGHIKDLTDTDRDIKLDPFDAQVSLIVVGGELAANGSGPLSIDSPLSVELYRVSMLAP TKSSGISFNGILGERQDEILDLLVRQQKAVLIDPVERQTELQD
Sequences:
>Translated_523_residues MNSARKGSLSLLAGAMLLASAGAFASVEPAKPATTAKELQQAKTYTVSSAPTEALELAKPKLPDLSGYTAEAAAAKIVRS KPGKISVRRMMQEDALKDFIGGDNKMAEWVVRQHGIPQAIFVDDGYMNLKELAQKLPKQYFSETSPGVYLAKLPIVVGRK GILEIDGQTQELRLSQEAGSFLVNDGQLFVRDTKVTGWREKENGPATFRSPKEFRPFLLAWGGTETYIVNSKMASFGYAN SKSYGVSISQYTPNMAKVLKRPEPTGWIVGSEFSDMWYGFYCYETRDFVVKGNTYKDNIVYGIDPHDRSHGLIIAENTVY GTKKKHGIIISREVNDSFIFNNKSYDNHLSGLVIDRNSVNNIIAYNEIYKNHTDGITLYESADNLLWGNKVISNKRHGIR IRNSVNIRLYENVAMANGLTGVYGHIKDLTDTDRDIKLDPFDAQVSLIVVGGELAANGSGPLSIDSPLSVELYRVSMLAP TKSSGISFNGILGERQDEILDLLVRQQKAVLIDPVERQTELQD >Mature_523_residues MNSARKGSLSLLAGAMLLASAGAFASVEPAKPATTAKELQQAKTYTVSSAPTEALELAKPKLPDLSGYTAEAAAAKIVRS KPGKISVRRMMQEDALKDFIGGDNKMAEWVVRQHGIPQAIFVDDGYMNLKELAQKLPKQYFSETSPGVYLAKLPIVVGRK GILEIDGQTQELRLSQEAGSFLVNDGQLFVRDTKVTGWREKENGPATFRSPKEFRPFLLAWGGTETYIVNSKMASFGYAN SKSYGVSISQYTPNMAKVLKRPEPTGWIVGSEFSDMWYGFYCYETRDFVVKGNTYKDNIVYGIDPHDRSHGLIIAENTVY GTKKKHGIIISREVNDSFIFNNKSYDNHLSGLVIDRNSVNNIIAYNEIYKNHTDGITLYESADNLLWGNKVISNKRHGIR IRNSVNIRLYENVAMANGLTGVYGHIKDLTDTDRDIKLDPFDAQVSLIVVGGELAANGSGPLSIDSPLSVELYRVSMLAP TKSSGISFNGILGERQDEILDLLVRQQKAVLIDPVERQTELQD
Specific function: Bifunctional protein that converts poly(beta-D- mannuronate) to alpha-L-guluronate and that is also part of a periplasmic protein complex that serves as a scaffold that leads the newly formed alginate polymer through the periplasmic space to the outer mem
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 6 PbH1 repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006633 - InterPro: IPR022441 - InterPro: IPR006626 - InterPro: IPR012334 - InterPro: IPR011050 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57811; Mature: 57811
Theoretical pI: Translated: 8.28; Mature: 8.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSARKGSLSLLAGAMLLASAGAFASVEPAKPATTAKELQQAKTYTVSSAPTEALELAKP CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHEEEECCCCHHHHHHCCC KLPDLSGYTAEAAAAKIVRSKPGKISVRRMMQEDALKDFIGGDNKMAEWVVRQHGIPQAI CCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEE FVDDGYMNLKELAQKLPKQYFSETSPGVYLAKLPIVVGRKGILEIDGQTQELRLSQEAGS EEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCEEECCCCEEEECCCCCEEEEEHHCCC FLVNDGQLFVRDTKVTGWREKENGPATFRSPKEFRPFLLAWGGTETYIVNSKMASFGYAN EEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEECCHHHCCCCC SKSYGVSISQYTPNMAKVLKRPEPTGWIVGSEFSDMWYGFYCYETRDFVVKGNTYKDNIV CCCCCEEEHHCCCHHHHHHCCCCCCEEEECCCCCCCEEEEEEEECCEEEEECCCCCCCEE YGIDPHDRSHGLIIAENTVYGTKKKHGIIISREVNDSFIFNNKSYDNHLSGLVIDRNSVN EECCCCCCCCCEEEECCCEECCCCCCCEEEEEECCCCEEECCCCCCCCCCEEEEECCCCC NIIAYNEIYKNHTDGITLYESADNLLWGNKVISNKRHGIRIRNSVNIRLYENVAMANGLT CEEEEHHHHHCCCCCEEEEECCCCEEECCHHHCCCCCCEEEECEEEEEEEECCHHHCCCC GVYGHIKDLTDTDRDIKLDPFDAQVSLIVVGGELAANGSGPLSIDSPLSVELYRVSMLAP HHHHHHHCCCCCCCCEEECCCCCEEEEEEECCEEECCCCCCEEECCCCEEEEEEEEEECC TKSSGISFNGILGERQDEILDLLVRQQKAVLIDPVERQTELQD CCCCCEEEECCCCCCHHHHHHHHHHCCCCEEECCCHHHCCCCC >Mature Secondary Structure MNSARKGSLSLLAGAMLLASAGAFASVEPAKPATTAKELQQAKTYTVSSAPTEALELAKP CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHEEEECCCCHHHHHHCCC KLPDLSGYTAEAAAAKIVRSKPGKISVRRMMQEDALKDFIGGDNKMAEWVVRQHGIPQAI CCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEE FVDDGYMNLKELAQKLPKQYFSETSPGVYLAKLPIVVGRKGILEIDGQTQELRLSQEAGS EEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCEEECCCCEEEECCCCCEEEEEHHCCC FLVNDGQLFVRDTKVTGWREKENGPATFRSPKEFRPFLLAWGGTETYIVNSKMASFGYAN EEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEECCHHHCCCCC SKSYGVSISQYTPNMAKVLKRPEPTGWIVGSEFSDMWYGFYCYETRDFVVKGNTYKDNIV CCCCCEEEHHCCCHHHHHHCCCCCCEEEECCCCCCCEEEEEEEECCEEEEECCCCCCCEE YGIDPHDRSHGLIIAENTVYGTKKKHGIIISREVNDSFIFNNKSYDNHLSGLVIDRNSVN EECCCCCCCCCEEEECCCEECCCCCCCEEEEEECCCCEEECCCCCCCCCCEEEEECCCCC NIIAYNEIYKNHTDGITLYESADNLLWGNKVISNKRHGIRIRNSVNIRLYENVAMANGLT CEEEEHHHHHCCCCCEEEEECCCCEEECCHHHCCCCCCEEEECEEEEEEEECCHHHCCCC GVYGHIKDLTDTDRDIKLDPFDAQVSLIVVGGELAANGSGPLSIDSPLSVELYRVSMLAP HHHHHHHCCCCCCCCEEECCCCCEEEEEEECCEEECCCCCCEEECCCCEEEEEEEEEECC TKSSGISFNGILGERQDEILDLLVRQQKAVLIDPVERQTELQD CCCCCEEEECCCCCCHHHHHHHHHHCCCCEEECCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12775688 [H]