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The map label for this gene is algE [H]

Identifier: 77457183

GI number: 77457183

Start: 1113955

End: 1115436

Strand: Reverse

Name: algE [H]

Synonym: Pfl01_0956

Alternate gene names: 77457183

Gene position: 1115436-1113955 (Counterclockwise)

Preceding gene: 77457184

Following gene: 77457182

Centisome position: 17.32

GC content: 62.89

Gene sequence:

>1482_bases
ATGAAATTGAATCCCTTTGTGAAGGCCGGCATTGGCCTCACGTTCGCGCTGATCTGGTCTTGCCCGACCCTGGCCGCGAT
GACGGAATCGAAAAACTTCGGCCTCGAAGTGAAAATCACCGGTCAGTCCGAAGACGACCGCGACCTCGGCACCGCCAGCG
GCGGCGACGTCAACGGCCTCGGCCTTGATCTGCGTCCGTGGGTCTACGGCGAAAGCGGCGCGTGGAGCGCCTACGCCATG
GGCCAGGCCGTGACCTCGACCGACATCATCGAGACCGACACCCTGAAGCAGTCCGACGGTGAACAAACCACCGACAACGG
CGACCGCAAGACCAAGAAAAACTACCTGGCGATGCGCGAGTTCTGGGTCGGCTACAGCGGCCTGACGCCCTACCCCGGCG
AGATCCTCAAGTTCGGTCGCCAGCGCCTGCGCAACGACGACGGCCAGTGGCGCGACACCAACATCGAAGCCTTGAACTGG
ACTTTCGACACCACCCTGCTGCGGGCCAACGCCGGTGTCGCCGAACGCTTCAGCGAATACCGCACCGACTTGAAAGAGCT
GGCGCCGAAAGACAAGGATCGCCTGCACGCCTACGCCGATGCCGCTTACCAGTGGACACCGGGCAACTGGGTCGGGATTC
GCGGCCACCACACCCATGACGACGGCAAGCTCGACTATCCGGAGCCGGGCGTGGCCGGCGACTCGCTGGACAAGAAAGAA
AACGGCGACATCAGCTGGCTCGGCCTGACCGCTGACAGCGACGCCTACAACTGGCGCAACACCAACACCGTCAACTACTG
GGGCAGCATCACCGGCATGAGCGGCGACCGCGACACGGTCAACGCCCTCAACGCCGATGGCACCCGCCCGGCGCAAGCCA
AGCGCAGTGACAACGTCGACGGCTGGGCCACCGACATCGGTGTGCGTCTGCGCCTCGATCCGCAGTGGCAGATCGGTGCG
GCGTATGCCCGTGCCAGCGCCGATTACGAACAGAACGGCCTGGAAAGCAACCGCTCGAACTACACCGGTACTCGCTCCCG
CGTTCACCGTTTCGGCGAGGCCTTCCGTGGCGAAATGAACAACATGCAGACCGCCACCCTGTTCGGTTCCTGGATGCTCA
ACGACCAGTACGACGCCAGCCTGATCTACCACAAGTTCTGGCGCGTGGACGGCAACAAGCCGGTTGGCAGCAACGGCATC
AACGCCGTGGAAAACAACACCGACGACGTCACCGGCGCAATCCTTTCCAGCACCTCGCTGCCATTGCAGGACGGTAACAA
GGATCTGGGCCAGGAAATGGATCTGGTGGTCACCAAGTACTTCAAGCAAGGCTTGCTGCCGGCGGCGCTGAGCCAGTCGA
TCGACGAGCCGTCGGCGCTGGTACGTTTCCGTGGCGGTGTGTTCAAGCCGGGTGATGCCTACGGCAGCCAGGTTGATTCG
TACATGCACCGCGCGTTCATCGACGTGATCTGGCGCTTCTGA

Upstream 100 bases:

>100_bases
CCCAGCGCCTGCTGCAACAGGAACAGGCGACCCGTGGCGCCCTGAACCAGAACACGCTGCAACTGCACGCCCTGCAAGAA
GAAGACGGCGAGGAAAAATT

Downstream 100 bases:

>100_bases
TGCTGACCGCCAAGGGAGTGCCCGACATGAACAGTGCCCGCAAAGGCTCACTCAGCCTGCTGGCCGGCGCTATGCTGCTG
GCCTCGGCCGGCGCCTTCGC

Product: outer membrane protein AlgE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 493; Mature: 493

Protein sequence:

>493_residues
MKLNPFVKAGIGLTFALIWSCPTLAAMTESKNFGLEVKITGQSEDDRDLGTASGGDVNGLGLDLRPWVYGESGAWSAYAM
GQAVTSTDIIETDTLKQSDGEQTTDNGDRKTKKNYLAMREFWVGYSGLTPYPGEILKFGRQRLRNDDGQWRDTNIEALNW
TFDTTLLRANAGVAERFSEYRTDLKELAPKDKDRLHAYADAAYQWTPGNWVGIRGHHTHDDGKLDYPEPGVAGDSLDKKE
NGDISWLGLTADSDAYNWRNTNTVNYWGSITGMSGDRDTVNALNADGTRPAQAKRSDNVDGWATDIGVRLRLDPQWQIGA
AYARASADYEQNGLESNRSNYTGTRSRVHRFGEAFRGEMNNMQTATLFGSWMLNDQYDASLIYHKFWRVDGNKPVGSNGI
NAVENNTDDVTGAILSSTSLPLQDGNKDLGQEMDLVVTKYFKQGLLPAALSQSIDEPSALVRFRGGVFKPGDAYGSQVDS
YMHRAFIDVIWRF

Sequences:

>Translated_493_residues
MKLNPFVKAGIGLTFALIWSCPTLAAMTESKNFGLEVKITGQSEDDRDLGTASGGDVNGLGLDLRPWVYGESGAWSAYAM
GQAVTSTDIIETDTLKQSDGEQTTDNGDRKTKKNYLAMREFWVGYSGLTPYPGEILKFGRQRLRNDDGQWRDTNIEALNW
TFDTTLLRANAGVAERFSEYRTDLKELAPKDKDRLHAYADAAYQWTPGNWVGIRGHHTHDDGKLDYPEPGVAGDSLDKKE
NGDISWLGLTADSDAYNWRNTNTVNYWGSITGMSGDRDTVNALNADGTRPAQAKRSDNVDGWATDIGVRLRLDPQWQIGA
AYARASADYEQNGLESNRSNYTGTRSRVHRFGEAFRGEMNNMQTATLFGSWMLNDQYDASLIYHKFWRVDGNKPVGSNGI
NAVENNTDDVTGAILSSTSLPLQDGNKDLGQEMDLVVTKYFKQGLLPAALSQSIDEPSALVRFRGGVFKPGDAYGSQVDS
YMHRAFIDVIWRF
>Mature_493_residues
MKLNPFVKAGIGLTFALIWSCPTLAAMTESKNFGLEVKITGQSEDDRDLGTASGGDVNGLGLDLRPWVYGESGAWSAYAM
GQAVTSTDIIETDTLKQSDGEQTTDNGDRKTKKNYLAMREFWVGYSGLTPYPGEILKFGRQRLRNDDGQWRDTNIEALNW
TFDTTLLRANAGVAERFSEYRTDLKELAPKDKDRLHAYADAAYQWTPGNWVGIRGHHTHDDGKLDYPEPGVAGDSLDKKE
NGDISWLGLTADSDAYNWRNTNTVNYWGSITGMSGDRDTVNALNADGTRPAQAKRSDNVDGWATDIGVRLRLDPQWQIGA
AYARASADYEQNGLESNRSNYTGTRSRVHRFGEAFRGEMNNMQTATLFGSWMLNDQYDASLIYHKFWRVDGNKPVGSNGI
NAVENNTDDVTGAILSSTSLPLQDGNKDLGQEMDLVVTKYFKQGLLPAALSQSIDEPSALVRFRGGVFKPGDAYGSQVDS
YMHRAFIDVIWRF

Specific function: Has non-porin-like, channel-forming properties and probably functions as an alginate permeability pore [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Peripheral membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AlgE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54698; Mature: 54698

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLNPFVKAGIGLTFALIWSCPTLAAMTESKNFGLEVKITGQSEDDRDLGTASGGDVNGL
CCCCCHHHHCCCHHHHHHHCCCHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCC
GLDLRPWVYGESGAWSAYAMGQAVTSTDIIETDTLKQSDGEQTTDNGDRKTKKNYLAMRE
CEECCCEEECCCCCCCHHHHCCHHCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHH
FWVGYSGLTPYPGEILKFGRQRLRNDDGQWRDTNIEALNWTFDTTLLRANAGVAERFSEY
HHCCCCCCCCCCHHHHHHHHHHHCCCCCCEECCCCEEEEEEEEHEEEECCCCHHHHHHHH
RTDLKELAPKDKDRLHAYADAAYQWTPGNWVGIRGHHTHDDGKLDYPEPGVAGDSLDKKE
HHHHHHHCCCCHHHHHHHHCCEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
NGDISWLGLTADSDAYNWRNTNTVNYWGSITGMSGDRDTVNALNADGTRPAQAKRSDNVD
CCCEEEEEEECCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHCCCCCCCCCCCCCCCCCC
GWATDIGVRLRLDPQWQIGAAYARASADYEQNGLESNRSNYTGTRSRVHRFGEAFRGEMN
CEEECEEEEEEECCCCCCCHHHHHHCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHC
NMQTATLFGSWMLNDQYDASLIYHKFWRVDGNKPVGSNGINAVENNTDDVTGAILSSTSL
CCEEEEEEEEEEECCCCCHHEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCC
PLQDGNKDLGQEMDLVVTKYFKQGLLPAALSQSIDEPSALVRFRGGVFKPGDAYGSQVDS
CCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHCCCCCCCCCHHHHHHHH
YMHRAFIDVIWRF
HHHHHHHHHHHCC
>Mature Secondary Structure
MKLNPFVKAGIGLTFALIWSCPTLAAMTESKNFGLEVKITGQSEDDRDLGTASGGDVNGL
CCCCCHHHHCCCHHHHHHHCCCHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCC
GLDLRPWVYGESGAWSAYAMGQAVTSTDIIETDTLKQSDGEQTTDNGDRKTKKNYLAMRE
CEECCCEEECCCCCCCHHHHCCHHCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHH
FWVGYSGLTPYPGEILKFGRQRLRNDDGQWRDTNIEALNWTFDTTLLRANAGVAERFSEY
HHCCCCCCCCCCHHHHHHHHHHHCCCCCCEECCCCEEEEEEEEHEEEECCCCHHHHHHHH
RTDLKELAPKDKDRLHAYADAAYQWTPGNWVGIRGHHTHDDGKLDYPEPGVAGDSLDKKE
HHHHHHHCCCCHHHHHHHHCCEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
NGDISWLGLTADSDAYNWRNTNTVNYWGSITGMSGDRDTVNALNADGTRPAQAKRSDNVD
CCCEEEEEEECCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHCCCCCCCCCCCCCCCCCC
GWATDIGVRLRLDPQWQIGAAYARASADYEQNGLESNRSNYTGTRSRVHRFGEAFRGEMN
CEEECEEEEEEECCCCCCCHHHHHHCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHC
NMQTATLFGSWMLNDQYDASLIYHKFWRVDGNKPVGSNGINAVENNTDDVTGAILSSTSL
CCEEEEEEEEEEECCCCCHHEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCC
PLQDGNKDLGQEMDLVVTKYFKQGLLPAALSQSIDEPSALVRFRGGVFKPGDAYGSQVDS
CCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHCCCCCCCCCHHHHHHHH
YMHRAFIDVIWRF
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12534463 [H]