Click here to switch to the map view.

The map label for this gene is algX [H]

Identifier: 77457181

GI number: 77457181

Start: 1110895

End: 1112346

Strand: Reverse

Name: algX [H]

Synonym: Pfl01_0954

Alternate gene names: 77457181

Gene position: 1112346-1110895 (Counterclockwise)

Preceding gene: 77457182

Following gene: 77457180

Centisome position: 17.28

GC content: 61.23

Gene sequence:

>1452_bases
ATGCACCCACACCTGATCAAATTACTCAGCCTGTCGGCCCTGACCGTGGGCATCCTGGCGGCCAGCAACGGCGCCCGCGC
AGATGAAGTCCAGCCGCCGAAATTCACGGCCGAGCCTTGCTGCAGCCTGTGCCCGGCCGCCCACGACGCGAAGAACTACA
CCACTCGCTACCAGCAGAACTTCACCACTCTGGTACAGGCCCAGGGCGACTGGTTGTTCCGGACCCAGGAAGACCTGCGC
ACCGAGTTCAACACCACACCGGCCGGCTACAAACGCCTGCAACAGCTGCACGATGCGTTCAAGGCCAAAGGCGTCGAACT
GGTGATCGTCTACCAGCCGACCCGTGGTCTGGTGAACCGCAACAAGCTCAACCCGGCAGAAAAAGCCGCGTTCGATTACG
AGAAAGCACTGGGCAACTACAAGACCATGCTCGGCCGCTTCGCGAAGATGGGTTACGTGGTGCCGGACCTGTCGCCGCTG
ACCAACGAATCGCTGCCGGACACCCTGCCTGCCCACGACTTCTACTTCCGCGGCGACCAGCACTGGACCCCGTACGGCGC
CCAGCGCACGGCGAAAATCGTCGCCGAGAAGGTCAAGCAGATCCCGGCCTTCGCCGACATTCCCAAGCGTGAGTTCGAAA
CCAAACGCTCCGGGCGCATGGGCAAGACCGGCACCCTGCACAACATGGCCGGGCAACTGTGCGGCACCAGTTACGCGATC
CAGTACATGGACCAGTTCACCACCGAGCCGAAAGGCGAGGCTGGCGACGGCGATCTGTTCGGTGATTCCGGCAATCCGCA
AATCACCCTGGTCGGCACTTCGCACAGCGGCAAGAACTACAACTTCGCCGGCTTCCTCGAAGAAGCCATCGGCGCCGACA
TTCTCAACGTCGCCTTCCCCGGCGGCGGTCTGGAAGGTTCGATGCTGCAGTACCTGGGCAGCGACGAATTCCAGAAGACG
CCGCCGAAAATCCTTATCTGGGAATTCTCGCCGCTGTACCGCCTCGACCAGGAAACCATCTATCGCCAGATGATGGCGCT
GCTCGACAACGGCTGCGAAGGCAAAGAGGCGCAAATGTCCGCCAGCACCACGCTCAAGCCGGGCGGCAAACAAGAACTGC
TGGTCAACAGCAAGAACCTGAACCTGCAGAACAGCAGCCATCAGGTCGACATCCGCTTCGCCGACACCTCGGTGAAAACC
CTGCAAGCCACCCTCTGGTACATGAACGGTCGCCACGAGGACATCAAGATCGAGAAACCGGAAACCTCCGACACCGACGG
TCGTTTCGCCTTTGAGTTGCGCACGGACGAAGACTGGGCCTCGCAAAACCTGCTGGCGGTCGAAGTCCAGGGTCCGGAAG
CGGGCACCGCGCCACAGAAAGTCGAAGCGAAAATCTGCAAACGCAACGTATTCCCGGGCGCTGGGCAACAAACCGCTCAG
GTCGGGCAATGA

Upstream 100 bases:

>100_bases
CGCCAGGATGAAATTCTCGACCTGCTGGTGCGCCAGCAGAAAGCCGTGCTGATCGACCCTGTCGAACGCCAGACCGAATT
GCAGGACTGAGGATAATTTT

Downstream 100 bases:

>100_bases
GGTCTGCTATGCGAAATCCGAAACTGAAAACTCTTTTGGCGCCGACACTGCTCGGGCTGGCGATCTTCGCCGGCACCGCG
CAGGCCGCCGCACCACTGCG

Product: alginate biosynthesis protein AlgX

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 483; Mature: 483

Protein sequence:

>483_residues
MHPHLIKLLSLSALTVGILAASNGARADEVQPPKFTAEPCCSLCPAAHDAKNYTTRYQQNFTTLVQAQGDWLFRTQEDLR
TEFNTTPAGYKRLQQLHDAFKAKGVELVIVYQPTRGLVNRNKLNPAEKAAFDYEKALGNYKTMLGRFAKMGYVVPDLSPL
TNESLPDTLPAHDFYFRGDQHWTPYGAQRTAKIVAEKVKQIPAFADIPKREFETKRSGRMGKTGTLHNMAGQLCGTSYAI
QYMDQFTTEPKGEAGDGDLFGDSGNPQITLVGTSHSGKNYNFAGFLEEAIGADILNVAFPGGGLEGSMLQYLGSDEFQKT
PPKILIWEFSPLYRLDQETIYRQMMALLDNGCEGKEAQMSASTTLKPGGKQELLVNSKNLNLQNSSHQVDIRFADTSVKT
LQATLWYMNGRHEDIKIEKPETSDTDGRFAFELRTDEDWASQNLLAVEVQGPEAGTAPQKVEAKICKRNVFPGAGQQTAQ
VGQ

Sequences:

>Translated_483_residues
MHPHLIKLLSLSALTVGILAASNGARADEVQPPKFTAEPCCSLCPAAHDAKNYTTRYQQNFTTLVQAQGDWLFRTQEDLR
TEFNTTPAGYKRLQQLHDAFKAKGVELVIVYQPTRGLVNRNKLNPAEKAAFDYEKALGNYKTMLGRFAKMGYVVPDLSPL
TNESLPDTLPAHDFYFRGDQHWTPYGAQRTAKIVAEKVKQIPAFADIPKREFETKRSGRMGKTGTLHNMAGQLCGTSYAI
QYMDQFTTEPKGEAGDGDLFGDSGNPQITLVGTSHSGKNYNFAGFLEEAIGADILNVAFPGGGLEGSMLQYLGSDEFQKT
PPKILIWEFSPLYRLDQETIYRQMMALLDNGCEGKEAQMSASTTLKPGGKQELLVNSKNLNLQNSSHQVDIRFADTSVKT
LQATLWYMNGRHEDIKIEKPETSDTDGRFAFELRTDEDWASQNLLAVEVQGPEAGTAPQKVEAKICKRNVFPGAGQQTAQ
VGQ
>Mature_483_residues
MHPHLIKLLSLSALTVGILAASNGARADEVQPPKFTAEPCCSLCPAAHDAKNYTTRYQQNFTTLVQAQGDWLFRTQEDLR
TEFNTTPAGYKRLQQLHDAFKAKGVELVIVYQPTRGLVNRNKLNPAEKAAFDYEKALGNYKTMLGRFAKMGYVVPDLSPL
TNESLPDTLPAHDFYFRGDQHWTPYGAQRTAKIVAEKVKQIPAFADIPKREFETKRSGRMGKTGTLHNMAGQLCGTSYAI
QYMDQFTTEPKGEAGDGDLFGDSGNPQITLVGTSHSGKNYNFAGFLEEAIGADILNVAFPGGGLEGSMLQYLGSDEFQKT
PPKILIWEFSPLYRLDQETIYRQMMALLDNGCEGKEAQMSASTTLKPGGKQELLVNSKNLNLQNSSHQVDIRFADTSVKT
LQATLWYMNGRHEDIKIEKPETSDTDGRFAFELRTDEDWASQNLLAVEVQGPEAGTAPQKVEAKICKRNVFPGAGQQTAQ
VGQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AlgX family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53450; Mature: 53450

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHPHLIKLLSLSALTVGILAASNGARADEVQPPKFTAEPCCSLCPAAHDAKNYTTRYQQN
CCCHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHC
FTTLVQAQGDWLFRTQEDLRTEFNTTPAGYKRLQQLHDAFKAKGVELVIVYQPTRGLVNR
CEEEEEECCCEEEECHHHHHHHCCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCC
NKLNPAEKAAFDYEKALGNYKTMLGRFAKMGYVVPDLSPLTNESLPDTLPAHDFYFRGDQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCC
HWTPYGAQRTAKIVAEKVKQIPAFADIPKREFETKRSGRMGKTGTLHNMAGQLCGTSYAI
CCCCCCHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHCHHHHH
QYMDQFTTEPKGEAGDGDLFGDSGNPQITLVGTSHSGKNYNFAGFLEEAIGADILNVAFP
HHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCEEEEECC
GGGLEGSMLQYLGSDEFQKTPPKILIWEFSPLYRLDQETIYRQMMALLDNGCEGKEAQMS
CCCCCHHHHHHHCCCCHHCCCCCEEEECCCCHHHCCHHHHHHHHHHHHHCCCCCCCCCCC
ASTTLKPGGKQELLVNSKNLNLQNSSHQVDIRFADTSVKTLQATLWYMNGRHEDIKIEKP
CCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCCHHHHHEEEEEEECCCCCCEEEECC
ETSDTDGRFAFELRTDEDWASQNLLAVEVQGPEAGTAPQKVEAKICKRNVFPGAGQQTAQ
CCCCCCCEEEEEEECCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCHHC
VGQ
CCC
>Mature Secondary Structure
MHPHLIKLLSLSALTVGILAASNGARADEVQPPKFTAEPCCSLCPAAHDAKNYTTRYQQN
CCCHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHC
FTTLVQAQGDWLFRTQEDLRTEFNTTPAGYKRLQQLHDAFKAKGVELVIVYQPTRGLVNR
CEEEEEECCCEEEECHHHHHHHCCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCC
NKLNPAEKAAFDYEKALGNYKTMLGRFAKMGYVVPDLSPLTNESLPDTLPAHDFYFRGDQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCC
HWTPYGAQRTAKIVAEKVKQIPAFADIPKREFETKRSGRMGKTGTLHNMAGQLCGTSYAI
CCCCCCHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHCHHHHH
QYMDQFTTEPKGEAGDGDLFGDSGNPQITLVGTSHSGKNYNFAGFLEEAIGADILNVAFP
HHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCEEEEECC
GGGLEGSMLQYLGSDEFQKTPPKILIWEFSPLYRLDQETIYRQMMALLDNGCEGKEAQMS
CCCCCHHHHHHHCCCCHHCCCCCEEEECCCCHHHCCHHHHHHHHHHHHHCCCCCCCCCCC
ASTTLKPGGKQELLVNSKNLNLQNSSHQVDIRFADTSVKTLQATLWYMNGRHEDIKIEKP
CCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCCHHHHHEEEEEEECCCCCCEEEECC
ETSDTDGRFAFELRTDEDWASQNLLAVEVQGPEAGTAPQKVEAKICKRNVFPGAGQQTAQ
CCCCCCCEEEEEEECCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCHHC
VGQ
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12775688 [H]