| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is ldh [H]
Identifier: 77457142
GI number: 77457142
Start: 1065925
End: 1066944
Strand: Direct
Name: ldh [H]
Synonym: Pfl01_0915
Alternate gene names: 77457142
Gene position: 1065925-1066944 (Clockwise)
Preceding gene: 77457140
Following gene: 77457144
Centisome position: 16.56
GC content: 63.43
Gene sequence:
>1020_bases ATGTTCGCTCTCATGCAAAGCACTCGCCTGGAATCGCTGCACCTTAGCGTTGATCCGGTGTCCGGATTGAAGGCGGTCAT TGCCATCCATAACAGTCGCCTCGGGCCAGCCCTGGGCGGGTGTCGTTATCTTGCCTATCCGAACGACGAATCCGCAGTCG AGGATGCCATACGCCTGGCCCAGGGCATGAGCTACAAGGCCGCATTGGCTGGTCTCGCCCAAGGCGGTGGGGTGGCCGTG ATCGTGCGGCCGGCCCACGTGGAAAACCGCGCCGCACTGTTCGAAGCCTTCGGCCGTTGCATCGATCAGCTCGACGGGCG CTACATCACCGCCATCGACAGCGGCACTTCGGTGGCGGACATGGATTGCATCGCCCAGCAGACCCAGCATGTCACCAGTA CCACCTCGGCCGGCGACCCTGCACCGCATGCGGCGATGGGCGTGTTCACCGGGATTCGCGCCACTGCGATGGCACGGCTC GGTAGCGACAACCTCGAAGGCTTGCGCGTGGCGATTCAGGGGTTGGGCAATGTTGGTTATGCCTTGGCCGAACAGTTGCA CGCCGCCGGCGCCGAACTGCTGGTCAGCGACATCGACCACGGCAAGGTGCAACTGGCGATGGAACAACTCAACGCCCATC CGATCGCCAACGACGCGTTGCTCAGCACGCCGTGCGACATCCTCGCGCCGTGCGGTTTGGGCGGTGTGCTCAACAGCCAC ACGGTCACCCAGTTGCGCTGCTCGGCGGTGGCGGGTTCGGCCAACAATCAGCTGACGCACCTGGACGTCGCCGATCAACT GGAACGGCGCGGCATCCTGTATGCGCCGGATTACGTGATCAATGCCGGCGGGCTGATCTACGTTTCCCTCAAGCACCGGG GCGAAGAGCTGACGACCATCACTGCGCACCTGTCGAAGATCAGCTCGCGCCTTACCGAAGTCTTCGCCCACGCCCAGGCG GAAAAACGTTCACCCGCGCGGGTGGCTGACGAACTGGCGGAAAAGGTGTTGTACCGCTGA
Upstream 100 bases:
>100_bases AACCCTGTAATCGGTGGCGGCGCTTATTCCGGTGCGCTTCAGCAATTTTCGGGCGCAAGCCTATACTGGCGTCTACCAGA AGTGATTCGGGAGCCTGCCG
Downstream 100 bases:
>100_bases GATTCGTCCGGGCATGAAAAAGCCCCTGAGTCTTTCAACTCAGGGGCTATTCAATTCAGAGGCTTCAATTACTTCGCAGC CTTTGCCGCTTTGGCAGGTT
Product: Glu/Leu/Phe/Val dehydrogenase, dimerization region
Products: NA
Alternate protein names: LeuDH [H]
Number of amino acids: Translated: 339; Mature: 339
Protein sequence:
>339_residues MFALMQSTRLESLHLSVDPVSGLKAVIAIHNSRLGPALGGCRYLAYPNDESAVEDAIRLAQGMSYKAALAGLAQGGGVAV IVRPAHVENRAALFEAFGRCIDQLDGRYITAIDSGTSVADMDCIAQQTQHVTSTTSAGDPAPHAAMGVFTGIRATAMARL GSDNLEGLRVAIQGLGNVGYALAEQLHAAGAELLVSDIDHGKVQLAMEQLNAHPIANDALLSTPCDILAPCGLGGVLNSH TVTQLRCSAVAGSANNQLTHLDVADQLERRGILYAPDYVINAGGLIYVSLKHRGEELTTITAHLSKISSRLTEVFAHAQA EKRSPARVADELAEKVLYR
Sequences:
>Translated_339_residues MFALMQSTRLESLHLSVDPVSGLKAVIAIHNSRLGPALGGCRYLAYPNDESAVEDAIRLAQGMSYKAALAGLAQGGGVAV IVRPAHVENRAALFEAFGRCIDQLDGRYITAIDSGTSVADMDCIAQQTQHVTSTTSAGDPAPHAAMGVFTGIRATAMARL GSDNLEGLRVAIQGLGNVGYALAEQLHAAGAELLVSDIDHGKVQLAMEQLNAHPIANDALLSTPCDILAPCGLGGVLNSH TVTQLRCSAVAGSANNQLTHLDVADQLERRGILYAPDYVINAGGLIYVSLKHRGEELTTITAHLSKISSRLTEVFAHAQA EKRSPARVADELAEKVLYR >Mature_339_residues MFALMQSTRLESLHLSVDPVSGLKAVIAIHNSRLGPALGGCRYLAYPNDESAVEDAIRLAQGMSYKAALAGLAQGGGVAV IVRPAHVENRAALFEAFGRCIDQLDGRYITAIDSGTSVADMDCIAQQTQHVTSTTSAGDPAPHAAMGVFTGIRATAMARL GSDNLEGLRVAIQGLGNVGYALAEQLHAAGAELLVSDIDHGKVQLAMEQLNAHPIANDALLSTPCDILAPCGLGGVLNSH TVTQLRCSAVAGSANNQLTHLDVADQLERRGILYAPDYVINAGGLIYVSLKHRGEELTTITAHLSKISSRLTEVFAHAQA EKRSPARVADELAEKVLYR
Specific function: Functions catabolically in the bacterial metabolism of branched-chain L-amino acids, and plays an important role in spore germination in cooperation with alanine dehydrogenase [H]
COG id: COG0334
COG function: function code E; Glutamate dehydrogenase/leucine dehydrogenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Glu/Leu/Phe/Val dehydrogenases family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006095 - InterPro: IPR006096 - InterPro: IPR006097 - InterPro: IPR016211 - InterPro: IPR016040 [H]
Pfam domain/function: PF00208 ELFV_dehydrog; PF02812 ELFV_dehydrog_N [H]
EC number: =1.4.1.9 [H]
Molecular weight: Translated: 35704; Mature: 35704
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFALMQSTRLESLHLSVDPVSGLKAVIAIHNSRLGPALGGCRYLAYPNDESAVEDAIRLA CCCCHHHCCCCEEEEECCCHHHHEEEEEEECCCCCCCCCCCEEEECCCCHHHHHHHHHHH QGMSYKAALAGLAQGGGVAVIVRPAHVENRAALFEAFGRCIDQLDGRYITAIDSGTSVAD HCCCHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHH MDCIAQQTQHVTSTTSAGDPAPHAAMGVFTGIRATAMARLGSDNLEGLRVAIQGLGNVGY HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHH ALAEQLHAAGAELLVSDIDHGKVQLAMEQLNAHPIANDALLSTPCDILAPCGLGGVLNSH HHHHHHHHCCHHHHHHCCCCCHHHHHHHHHCCCCCCCCCHHCCCHHHHCCCCCCCCCCCC TVTQLRCSAVAGSANNQLTHLDVADQLERRGILYAPDYVINAGGLIYVSLKHRGEELTTI HHHHHHHHHHCCCCCCCEEEECHHHHHHHCCCEECCCEEEECCCEEEEEEECCCCHHHHH TAHLSKISSRLTEVFAHAQAEKRSPARVADELAEKVLYR HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MFALMQSTRLESLHLSVDPVSGLKAVIAIHNSRLGPALGGCRYLAYPNDESAVEDAIRLA CCCCHHHCCCCEEEEECCCHHHHEEEEEEECCCCCCCCCCCEEEECCCCHHHHHHHHHHH QGMSYKAALAGLAQGGGVAVIVRPAHVENRAALFEAFGRCIDQLDGRYITAIDSGTSVAD HCCCHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHH MDCIAQQTQHVTSTTSAGDPAPHAAMGVFTGIRATAMARLGSDNLEGLRVAIQGLGNVGY HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHH ALAEQLHAAGAELLVSDIDHGKVQLAMEQLNAHPIANDALLSTPCDILAPCGLGGVLNSH HHHHHHHHCCHHHHHHCCCCCHHHHHHHHHCCCCCCCCCHHCCCHHHHCCCCCCCCCCCC TVTQLRCSAVAGSANNQLTHLDVADQLERRGILYAPDYVINAGGLIYVSLKHRGEELTTI HHHHHHHHHHCCCCCCCEEEECHHHHHHHCCCEECCCEEEECCCEEEEEEECCCCHHHHH TAHLSKISSRLTEVFAHAQAEKRSPARVADELAEKVLYR HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3069133; 1400267 [H]