| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is yjbA [C]
Identifier: 77457144
GI number: 77457144
Start: 1067651
End: 1068151
Strand: Direct
Name: yjbA [C]
Synonym: Pfl01_0917
Alternate gene names: 77457144
Gene position: 1067651-1068151 (Clockwise)
Preceding gene: 77457142
Following gene: 77457148
Centisome position: 16.58
GC content: 56.29
Gene sequence:
>501_bases GTGAAAATCAACTGGGCCGAGAAACTGCGGCAAAACGTGCATCAACTGGCCGAGTCCCTGGGCAACCTGTTCGTCGAGAC CTTCCATTACCTGGCGCTGTTCGCCATTGGTGCGGTAACCGCCTGGGCGGCGGTGATGGAATTTCTCGGGATGCTCGAGG AAGGGCACATCAAGATCGATGACATTCTGTTGCTGTTCATCTATCTGGAACTGGGGGCGATGGTCGGGATTTACTTCAAG ACCAACCACATGCCGGTGCGCTTCCTGATCTACGTGGCGATTACGGCACTGACGCGCCTGCTGATCTCCAACGTCTCGCA CCACAATCCGCCGGACATGGGGATCATTTACCTGTGCGGCGGGATTCTGCTGCTGGCGTTCTCGATCCTGGTGGTGCGTT ACGCTTCGTCGCAATTCCCTTCGGTGAAAATTGAGAACCCGCACCGCAAGATCGGCACGGGTTCCAGTGAACATCCGGAA GTGGAGAAGGGCGAACTTTAA
Upstream 100 bases:
>100_bases GATGGCGTGGCCTCTTTTCTGCATGCATCTGCGTACGTGCGCAATAACCGTCACGTCCAGCAAGCAACATCCGCTCGAAC CGGGCTAAGGAACCTTCATC
Downstream 100 bases:
>100_bases AGGCCGGCGGCTGGCCGGGGCTGATGTTTGGCCCGACGCGGTGGCGGAGTGATTCCGTCGCCGCGGGTCATGGCATCAAG GATCGCCATGGCGCTGTGGC
Product: phosphate-starvation-inducible E
Products: NA
Alternate protein names: PsiE Family Protein; Phosphate-Starvation-Inducible E Protein; Phosphate-Starvation-Inducible E Protein PsiE
Number of amino acids: Translated: 166; Mature: 166
Protein sequence:
>166_residues MKINWAEKLRQNVHQLAESLGNLFVETFHYLALFAIGAVTAWAAVMEFLGMLEEGHIKIDDILLLFIYLELGAMVGIYFK TNHMPVRFLIYVAITALTRLLISNVSHHNPPDMGIIYLCGGILLLAFSILVVRYASSQFPSVKIENPHRKIGTGSSEHPE VEKGEL
Sequences:
>Translated_166_residues MKINWAEKLRQNVHQLAESLGNLFVETFHYLALFAIGAVTAWAAVMEFLGMLEEGHIKIDDILLLFIYLELGAMVGIYFK TNHMPVRFLIYVAITALTRLLISNVSHHNPPDMGIIYLCGGILLLAFSILVVRYASSQFPSVKIENPHRKIGTGSSEHPE VEKGEL >Mature_166_residues MKINWAEKLRQNVHQLAESLGNLFVETFHYLALFAIGAVTAWAAVMEFLGMLEEGHIKIDDILLLFIYLELGAMVGIYFK TNHMPVRFLIYVAITALTRLLISNVSHHNPPDMGIIYLCGGILLLAFSILVVRYASSQFPSVKIENPHRKIGTGSSEHPE VEKGEL
Specific function: Unknown
COG id: COG3223
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18622; Mature: 18622
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKINWAEKLRQNVHQLAESLGNLFVETFHYLALFAIGAVTAWAAVMEFLGMLEEGHIKID CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH DILLLFIYLELGAMVGIYFKTNHMPVRFLIYVAITALTRLLISNVSHHNPPDMGIIYLCG HHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH GILLLAFSILVVRYASSQFPSVKIENPHRKIGTGSSEHPEVEKGEL HHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKINWAEKLRQNVHQLAESLGNLFVETFHYLALFAIGAVTAWAAVMEFLGMLEEGHIKID CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH DILLLFIYLELGAMVGIYFKTNHMPVRFLIYVAITALTRLLISNVSHHNPPDMGIIYLCG HHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH GILLLAFSILVVRYASSQFPSVKIENPHRKIGTGSSEHPEVEKGEL HHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA