Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
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Accession | NC_007492 |
Length | 6,438,405 |
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The map label for this gene is 77457015
Identifier: 77457015
GI number: 77457015
Start: 925155
End: 925988
Strand: Direct
Name: 77457015
Synonym: Pfl01_0788
Alternate gene names: NA
Gene position: 925155-925988 (Clockwise)
Preceding gene: 77457014
Following gene: 77457016
Centisome position: 14.37
GC content: 62.83
Gene sequence:
>834_bases ATGAGTTTTCTGGTGTTACTGCTGGCGGTCTGGATCGAGAAGTTCTCGGCTCTGCGCCAACGGGTGCAACGCGATGGCGG ATGGATCCGCGAACTGCACAAGCTTGAAACCGGTGGGCTGGCGAAACAGCCGTGGCTGGTGCTGATTGTTCTGGTGCTGC TGCCGGTGGCATTGCTGGGCTTGTTGCTGCTGGTGCTGGAGCCGGTGGCCTATGGTCTGCTGGCATTGCCGGTGCATTTA CTGGTGGTGATTTACAGCCTGGGGCGGGGTGACCTGCTCGGCGAACTCGGGCCGTTTCGCGACGCCTGGCGCCGTGAGGA CCTGCAGGCCGCCGCCCATGTGGCCAAGCGTGATCTGAACATCTGCGCCGAAAGCGGCGAACAATTGCTGGAGCAAGTGC AACGACATCTGTTGTGGCAGGCCTACCAGAGCTTTTTTGCGGTGATTTTTTGGTATTTCCTGCTCGGTCCGGTGGCGGCG CTGAGCTATCGCTTGCTGGCGCTGGCCGAAGAAAACGCCCAGAACCCGGCGGTGGCCGAACGGGCCGGGCAACTGCGTCA TGCCTTCGACTGGGTGCCGGTGCGCCTGCTGGCGGCGAGCCTTGCCCTGGTCGGCAATTTCGTCGCGGTCAGCCGAGTAA TGCTGCACGAGCTGCTGAACTGGAACATCAGCGCTGCGCAACTGATCAACAAGGTCGGACTGGCTGCCGGGGAAATCCCG CCGGCCGCCGTCGGTCCCGAAGGCATCAATACCCTCGACTGTCTGTGGGAACTGCTGCTGCGGGCGGCGGTGCTGTGGTA TGCCGGGTTTGCCCTGTGGACGGTGCTGGCGTAG
Upstream 100 bases:
>100_bases TCTGCGGGCACAGCGACATCGCCCCCGGACGCAAGACCGACCCCGGACCCGCATTCGACTGGGCACGCTACCGCGCCGCC CTGGCACAAGAGGAAGGACA
Downstream 100 bases:
>100_bases GCCGTTCCTGTGACGAGGGGGGCAATCCCCCTCGTTAACCTTAAGTTACAAAACCTCCCTTCGATTTGAGCTATACAGAG ATGGCGCCCGATAGTGGCTA
Product: AmpE
Products: NA
Alternate protein names: Signaling Modulator Of AmpD AmpE; Inner Membrane Protein
Number of amino acids: Translated: 277; Mature: 276
Protein sequence:
>277_residues MSFLVLLLAVWIEKFSALRQRVQRDGGWIRELHKLETGGLAKQPWLVLIVLVLLPVALLGLLLLVLEPVAYGLLALPVHL LVVIYSLGRGDLLGELGPFRDAWRREDLQAAAHVAKRDLNICAESGEQLLEQVQRHLLWQAYQSFFAVIFWYFLLGPVAA LSYRLLALAEENAQNPAVAERAGQLRHAFDWVPVRLLAASLALVGNFVAVSRVMLHELLNWNISAAQLINKVGLAAGEIP PAAVGPEGINTLDCLWELLLRAAVLWYAGFALWTVLA
Sequences:
>Translated_277_residues MSFLVLLLAVWIEKFSALRQRVQRDGGWIRELHKLETGGLAKQPWLVLIVLVLLPVALLGLLLLVLEPVAYGLLALPVHL LVVIYSLGRGDLLGELGPFRDAWRREDLQAAAHVAKRDLNICAESGEQLLEQVQRHLLWQAYQSFFAVIFWYFLLGPVAA LSYRLLALAEENAQNPAVAERAGQLRHAFDWVPVRLLAASLALVGNFVAVSRVMLHELLNWNISAAQLINKVGLAAGEIP PAAVGPEGINTLDCLWELLLRAAVLWYAGFALWTVLA >Mature_276_residues SFLVLLLAVWIEKFSALRQRVQRDGGWIRELHKLETGGLAKQPWLVLIVLVLLPVALLGLLLLVLEPVAYGLLALPVHLL VVIYSLGRGDLLGELGPFRDAWRREDLQAAAHVAKRDLNICAESGEQLLEQVQRHLLWQAYQSFFAVIFWYFLLGPVAAL SYRLLALAEENAQNPAVAERAGQLRHAFDWVPVRLLAASLALVGNFVAVSRVMLHELLNWNISAAQLINKVGLAAGEIPP AAVGPEGINTLDCLWELLLRAAVLWYAGFALWTVLA
Specific function: Unknown
COG id: COG3725
COG function: function code V; Membrane protein required for beta-lactamase induction
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30696; Mature: 30564
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFLVLLLAVWIEKFSALRQRVQRDGGWIRELHKLETGGLAKQPWLVLIVLVLLPVALLG CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH LLLLVLEPVAYGLLALPVHLLVVIYSLGRGDLLGELGPFRDAWRREDLQAAAHVAKRDLN HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH ICAESGEQLLEQVQRHLLWQAYQSFFAVIFWYFLLGPVAALSYRLLALAEENAQNPAVAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH RAGQLRHAFDWVPVRLLAASLALVGNFVAVSRVMLHELLNWNISAAQLINKVGLAAGEIP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC PAAVGPEGINTLDCLWELLLRAAVLWYAGFALWTVLA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SFLVLLLAVWIEKFSALRQRVQRDGGWIRELHKLETGGLAKQPWLVLIVLVLLPVALLG HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH LLLLVLEPVAYGLLALPVHLLVVIYSLGRGDLLGELGPFRDAWRREDLQAAAHVAKRDLN HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH ICAESGEQLLEQVQRHLLWQAYQSFFAVIFWYFLLGPVAALSYRLLALAEENAQNPAVAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH RAGQLRHAFDWVPVRLLAASLALVGNFVAVSRVMLHELLNWNISAAQLINKVGLAAGEIP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC PAAVGPEGINTLDCLWELLLRAAVLWYAGFALWTVLA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA