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The map label for this gene is omlA [H]

Identifier: 77456986

GI number: 77456986

Start: 891231

End: 891758

Strand: Reverse

Name: omlA [H]

Synonym: Pfl01_0759

Alternate gene names: 77456986

Gene position: 891758-891231 (Counterclockwise)

Preceding gene: 77456988

Following gene: 77456982

Centisome position: 13.85

GC content: 57.39

Gene sequence:

>528_bases
ATGCAAAACACCAAGCTCTTGCTAACCAGTTTCACCTTTGTGGGACTGCTCGCACTCGCCGGTTGTTCATTCCCCGGGGT
TTACAAAATCGACATCCAGCAGGGCAATGTCGTCACGCAGGACATGATAGACCAGTTACGCCCGGGAATGACCCGGCCGC
AAGTACGGTTTATCATGGGCAACCCTCTGCTTGCCGACACGTTCCATGCCAACCGCTGGGATTATCTGTACAGCCTGCAA
CCGGGTGGCGGTGAACGCCAGCAGGAACGCATGAGTGTCATTTTCGACTCGAATGACCGTCTTGTCAGCCTGTCCGGTGA
CTTCATGCCGGGCGTCAGCCGTGACGAAGCCATTCTCGGCAAGGACAGTGGCACCAGCGTGACCGCTCCTGCTGAGAACA
CCGAGCAGCCGAAACCGGAAAAACCGGCCAAGCCAGGCTCCTTGCTGGATCAGATCCAGAAGGACGTCGATGGTGTGGAA
ACCGTTCCGGTTCCAACGCCAGAACCGCTGGACACCTCGCCGCAATAA

Upstream 100 bases:

>100_bases
CATGGTCAGCTTTCTCGCGATGCTGCTTCGCAGCTTCTCTTAATGCGGGTATGATCGGCGTTTACGTTGTCCCAGCCAAG
ATAGTGGAAGTCGCCCACCG

Downstream 100 bases:

>100_bases
TTTGCGACGCAATAAAAAACCCGGAAATTCCGGGTTTTTTATTGCCTGCCGTTCGACCACCCTACTGGTTTCGCGCCTTG
GCTTCGGCAGCCTTGGCGGC

Product: SmpA/OmlA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MQNTKLLLTSFTFVGLLALAGCSFPGVYKIDIQQGNVVTQDMIDQLRPGMTRPQVRFIMGNPLLADTFHANRWDYLYSLQ
PGGGERQQERMSVIFDSNDRLVSLSGDFMPGVSRDEAILGKDSGTSVTAPAENTEQPKPEKPAKPGSLLDQIQKDVDGVE
TVPVPTPEPLDTSPQ

Sequences:

>Translated_175_residues
MQNTKLLLTSFTFVGLLALAGCSFPGVYKIDIQQGNVVTQDMIDQLRPGMTRPQVRFIMGNPLLADTFHANRWDYLYSLQ
PGGGERQQERMSVIFDSNDRLVSLSGDFMPGVSRDEAILGKDSGTSVTAPAENTEQPKPEKPAKPGSLLDQIQKDVDGVE
TVPVPTPEPLDTSPQ
>Mature_175_residues
MQNTKLLLTSFTFVGLLALAGCSFPGVYKIDIQQGNVVTQDMIDQLRPGMTRPQVRFIMGNPLLADTFHANRWDYLYSLQ
PGGGERQQERMSVIFDSNDRLVSLSGDFMPGVSRDEAILGKDSGTSVTAPAENTEQPKPEKPAKPGSLLDQIQKDVDGVE
TVPVPTPEPLDTSPQ

Specific function: May have a structural role in maintaining the cell envelope integrity [H]

COG id: COG2913

COG function: function code J; Small protein A (tmRNA-binding)

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smpA/omlA family [H]

Homologues:

Organism=Escherichia coli, GI87082138, Length=108, Percent_Identity=37.037037037037, Blast_Score=71, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007450 [H]

Pfam domain/function: PF04355 SmpA_OmlA [H]

EC number: NA

Molecular weight: Translated: 19134; Mature: 19134

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNTKLLLTSFTFVGLLALAGCSFPGVYKIDIQQGNVVTQDMIDQLRPGMTRPQVRFIMG
CCCCEEEHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEHHHHHHHHCCCCCCCEEEEEEC
NPLLADTFHANRWDYLYSLQPGGGERQQERMSVIFDSNDRLVSLSGDFMPGVSRDEAILG
CCEEEECCCCCCCEEEEEECCCCCCCCHHHEEEEECCCCCEEEECCCCCCCCCCCCEEEE
KDSGTSVTAPAENTEQPKPEKPAKPGSLLDQIQKDVDGVETVPVPTPEPLDTSPQ
CCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEECCCCCCCCCCCCCC
>Mature Secondary Structure
MQNTKLLLTSFTFVGLLALAGCSFPGVYKIDIQQGNVVTQDMIDQLRPGMTRPQVRFIMG
CCCCEEEHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEHHHHHHHHCCCCCCCEEEEEEC
NPLLADTFHANRWDYLYSLQPGGGERQQERMSVIFDSNDRLVSLSGDFMPGVSRDEAILG
CCEEEECCCCCCCEEEEEECCCCCCCCHHHEEEEECCCCCEEEECCCCCCCCCCCCEEEE
KDSGTSVTAPAENTEQPKPEKPAKPGSLLDQIQKDVDGVETVPVPTPEPLDTSPQ
CCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9973334 [H]