Click here to switch to the map view.

The map label for this gene is recN [H]

Identifier: 77456988

GI number: 77456988

Start: 892336

End: 894009

Strand: Reverse

Name: recN [H]

Synonym: Pfl01_0761

Alternate gene names: 77456988

Gene position: 894009-892336 (Counterclockwise)

Preceding gene: 77456997

Following gene: 77456986

Centisome position: 13.89

GC content: 60.99

Gene sequence:

>1674_bases
ATGCTGGTGCACCTGTCCGTACACAACTACGCCATCGTTGAACATCTCGATCTCGAACTTGATCGCGGCATGAGCGTGAT
TACCGGGGAAACCGGCGCCGGCAAATCGATCATGCTCGACGCCCTGGGCCTGACGCTCGGTGATCGCGCCGACAGCGGCG
TGGTTCGACCGGGCGCCGACAAGGCCGATATCCTGGCGACCTTCGACCTGGCCGATATCCCCGAGGCCAGCGCCTGGCTG
GCGGAACGCGACCTGGAAATCGACGGCCCGTGCATCCTGCGCCGGGTCATCACGTCCGAAGGTCGGTCACGCGGCTATAT
AAATGGCACGCCCTGCCCGCTTGGCGATCTCAAGGCACTCGGCGAGCTGCTGATCGATATCCACAGCCAGCACGAACACC
AATCCCTGCTCAAGACCGACACCCACCGGCGCCTGCTCGACGAGTACGCCGGGGCCACCGATCTGGCACGCCAGGTACAC
TTGGCCGCCCAGCGCTGGCGCCAGACTCGCCAGGAGCTGGAACGCCTTTCCAACTCCGGCGACGAACAGCGTGCACGCCA
TCAACTGCTCAGCTATCAACTCGAAGAACTGGAAAACCTCGGCCTCGGTGAAAACGAGCTGGAAGAGCTGGAGCAGGAAC
ACAAGAACCTGACCAACGCCGAAACCCTGCTCGGCATCTGCCGACAAGTGGTCGAGCAATGCAGCGAAAGCGATTCCGGC
AATGTGCTGAATGCCTTGACGGCCAGCCTCAACCGACTGTCGAGCGTGAACAGCTCGGTGGGTGCGCTGGGTGAAGCGAG
CAGCCTGCTGACCAGTGCGCAAATCCAGGTCGAAGAGGCCGTCGGCGAGCTCAATCGTTTTCTCGACAACTTCGACGCTG
ATCCGGCGCGCCTGCAATATCTCGAGGAACGCCTGGACTCCATTTACACATTGGCACGCAAACACCGCATTCAGCCGACG
GAAGTGGCAGAGATGCAGCAGAAGCTGCTCGACGAAATCGAAGCGCTGGACGCCAACGATGAATCCATCGAACGCCTCGC
CGAAGAACTCGCTTCCTATGCCCGCCACTATCAGGAAAAGGCTCGGGAACTCAGTGAGCTGCGCCATCAGGCAGCCGGCA
GCCTGGCAAGCGCGGTGGAACAGGAGATTCAGCGCCTGGGCATGCCCGGCGGGCGCTTCACCATCGAACTGCGCGCCAAC
AATAGCAGCGAGTTGCAACCCAATGGTCTGGAACAAGTCGAGCTGCTGGTGAGCGCCAACCCGGGTCAACCCTTGAAAGC
CTTGGCCAAAGTGGCGTCCGGCGGTGAGTTGTCACGGATCAGCCTGGCCATCCAGGTGATTACAGCCCAGACCTCTCGCG
TACCGACATTGGTATTCGACGAAGTGGACGTGGGGATTGGCGGTCCGACGGCGGAAATCGTCGGCCAGTTGTTACGCCGC
CTCGGGGATCGCGGACAGGTTCTGACGGTCACGCATTTGCCGCAAGTTGCGGCTCAGGGGCATCAGCACCTGTTCGTGCA
CAAGGTACGTGGCGAGCAGGCGACTCATACGGCCGTTTCGAAGCTGAGCAAGAATGACCGCATAGAAGAAGTCGCGCGGA
TGTTGGGCGGCATCGATCTGACCAAAGAGTCCTTGGCGCACGCGAAGAAGATGGTCGTAACCGCAAAGGTTTAA

Upstream 100 bases:

>100_bases
CATTTGATCGGATCATCCTCATCGATCCAAGCGAGGGCATTGTCAGCCCGAAACAAAACACTGTATAAATAACCAGACCT
GAAGCCTGGGAGCGGCCTTT

Downstream 100 bases:

>100_bases
GAACCGCAGAAAGCACGAAGGCGACCCTCGGGTCGCCTTCGTTCGTTTCGCGAACCTGAAATTCGCGCGACATGCTTACT
TTTTCTTGCGTACGTACAGG

Product: DNA repair protein RecN

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 557; Mature: 557

Protein sequence:

>557_residues
MLVHLSVHNYAIVEHLDLELDRGMSVITGETGAGKSIMLDALGLTLGDRADSGVVRPGADKADILATFDLADIPEASAWL
AERDLEIDGPCILRRVITSEGRSRGYINGTPCPLGDLKALGELLIDIHSQHEHQSLLKTDTHRRLLDEYAGATDLARQVH
LAAQRWRQTRQELERLSNSGDEQRARHQLLSYQLEELENLGLGENELEELEQEHKNLTNAETLLGICRQVVEQCSESDSG
NVLNALTASLNRLSSVNSSVGALGEASSLLTSAQIQVEEAVGELNRFLDNFDADPARLQYLEERLDSIYTLARKHRIQPT
EVAEMQQKLLDEIEALDANDESIERLAEELASYARHYQEKARELSELRHQAAGSLASAVEQEIQRLGMPGGRFTIELRAN
NSSELQPNGLEQVELLVSANPGQPLKALAKVASGGELSRISLAIQVITAQTSRVPTLVFDEVDVGIGGPTAEIVGQLLRR
LGDRGQVLTVTHLPQVAAQGHQHLFVHKVRGEQATHTAVSKLSKNDRIEEVARMLGGIDLTKESLAHAKKMVVTAKV

Sequences:

>Translated_557_residues
MLVHLSVHNYAIVEHLDLELDRGMSVITGETGAGKSIMLDALGLTLGDRADSGVVRPGADKADILATFDLADIPEASAWL
AERDLEIDGPCILRRVITSEGRSRGYINGTPCPLGDLKALGELLIDIHSQHEHQSLLKTDTHRRLLDEYAGATDLARQVH
LAAQRWRQTRQELERLSNSGDEQRARHQLLSYQLEELENLGLGENELEELEQEHKNLTNAETLLGICRQVVEQCSESDSG
NVLNALTASLNRLSSVNSSVGALGEASSLLTSAQIQVEEAVGELNRFLDNFDADPARLQYLEERLDSIYTLARKHRIQPT
EVAEMQQKLLDEIEALDANDESIERLAEELASYARHYQEKARELSELRHQAAGSLASAVEQEIQRLGMPGGRFTIELRAN
NSSELQPNGLEQVELLVSANPGQPLKALAKVASGGELSRISLAIQVITAQTSRVPTLVFDEVDVGIGGPTAEIVGQLLRR
LGDRGQVLTVTHLPQVAAQGHQHLFVHKVRGEQATHTAVSKLSKNDRIEEVARMLGGIDLTKESLAHAKKMVVTAKV
>Mature_557_residues
MLVHLSVHNYAIVEHLDLELDRGMSVITGETGAGKSIMLDALGLTLGDRADSGVVRPGADKADILATFDLADIPEASAWL
AERDLEIDGPCILRRVITSEGRSRGYINGTPCPLGDLKALGELLIDIHSQHEHQSLLKTDTHRRLLDEYAGATDLARQVH
LAAQRWRQTRQELERLSNSGDEQRARHQLLSYQLEELENLGLGENELEELEQEHKNLTNAETLLGICRQVVEQCSESDSG
NVLNALTASLNRLSSVNSSVGALGEASSLLTSAQIQVEEAVGELNRFLDNFDADPARLQYLEERLDSIYTLARKHRIQPT
EVAEMQQKLLDEIEALDANDESIERLAEELASYARHYQEKARELSELRHQAAGSLASAVEQEIQRLGMPGGRFTIELRAN
NSSELQPNGLEQVELLVSANPGQPLKALAKVASGGELSRISLAIQVITAQTSRVPTLVFDEVDVGIGGPTAEIVGQLLRR
LGDRGQVLTVTHLPQVAAQGHQHLFVHKVRGEQATHTAVSKLSKNDRIEEVARMLGGIDLTKESLAHAKKMVVTAKV

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=552, Percent_Identity=44.3840579710145, Blast_Score=450, Evalue=1e-128,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 61035; Mature: 61035

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVHLSVHNYAIVEHLDLELDRGMSVITGETGAGKSIMLDALGLTLGDRADSGVVRPGAD
CEEEEEECCCHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHCCHHCCCCCCCCCCCCCC
KADILATFDLADIPEASAWLAERDLEIDGPCILRRVITSEGRSRGYINGTPCPLGDLKAL
CCHHEEEECCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH
GELLIDIHSQHEHQSLLKTDTHRRLLDEYAGATDLARQVHLAAQRWRQTRQELERLSNSG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DEQRARHQLLSYQLEELENLGLGENELEELEQEHKNLTNAETLLGICRQVVEQCSESDSG
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCC
NVLNALTASLNRLSSVNSSVGALGEASSLLTSAQIQVEEAVGELNRFLDNFDADPARLQY
CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
LEERLDSIYTLARKHRIQPTEVAEMQQKLLDEIEALDANDESIERLAEELASYARHYQEK
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
ARELSELRHQAAGSLASAVEQEIQRLGMPGGRFTIELRANNSSELQPNGLEQVELLVSAN
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECC
PGQPLKALAKVASGGELSRISLAIQVITAQTSRVPTLVFDEVDVGIGGPTAEIVGQLLRR
CCCHHHHHHHHHCCCCHHHHHHHHHHEEHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHH
LGDRGQVLTVTHLPQVAAQGHQHLFVHKVRGEQATHTAVSKLSKNDRIEEVARMLGGIDL
HCCCCCEEEEECCHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCC
TKESLAHAKKMVVTAKV
CHHHHHHHHHHHEEECC
>Mature Secondary Structure
MLVHLSVHNYAIVEHLDLELDRGMSVITGETGAGKSIMLDALGLTLGDRADSGVVRPGAD
CEEEEEECCCHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHCCHHCCCCCCCCCCCCCC
KADILATFDLADIPEASAWLAERDLEIDGPCILRRVITSEGRSRGYINGTPCPLGDLKAL
CCHHEEEECCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH
GELLIDIHSQHEHQSLLKTDTHRRLLDEYAGATDLARQVHLAAQRWRQTRQELERLSNSG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DEQRARHQLLSYQLEELENLGLGENELEELEQEHKNLTNAETLLGICRQVVEQCSESDSG
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCC
NVLNALTASLNRLSSVNSSVGALGEASSLLTSAQIQVEEAVGELNRFLDNFDADPARLQY
CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
LEERLDSIYTLARKHRIQPTEVAEMQQKLLDEIEALDANDESIERLAEELASYARHYQEK
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
ARELSELRHQAAGSLASAVEQEIQRLGMPGGRFTIELRANNSSELQPNGLEQVELLVSAN
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECC
PGQPLKALAKVASGGELSRISLAIQVITAQTSRVPTLVFDEVDVGIGGPTAEIVGQLLRR
CCCHHHHHHHHHCCCCHHHHHHHHHHEEHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHH
LGDRGQVLTVTHLPQVAAQGHQHLFVHKVRGEQATHTAVSKLSKNDRIEEVARMLGGIDL
HCCCCCEEEEECCHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCC
TKESLAHAKKMVVTAKV
CHHHHHHHHHHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA