| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is 75674356
Identifier: 75674356
GI number: 75674356
Start: 181625
End: 183379
Strand: Direct
Name: 75674356
Synonym: Nwi_0157
Alternate gene names: NA
Gene position: 181625-183379 (Clockwise)
Preceding gene: 75674355
Following gene: 75674357
Centisome position: 5.34
GC content: 67.81
Gene sequence:
>1755_bases GTGTCGGTCGCTCATCGCAGACGCATTTCAGCTCTGGTCGTCAGCCGTTTCGCGCGCCGGACGATGGCGCGCGCCGGCGA CGGGCCTGCGGCGCTTTCGCGGCTATGGCCCGGCCGCGCCGACCGCCTGACCATCGCGCCGCACGACCTTCGGACGGCCG ACGCCACCCGCGCCGCCGAGATCTATGCCGGCCGCTTCGTGTTCGCGGGCAAGATCGTCACCTGTCACTCCCGCTCGGTC TTCGACCTCGAACCGCCGTCCGAGGACTGGGAAGCCGCGCTGCTGGGCTTTGGCTGGCTGCGGCATCTGCGCGCCGCCGA CACCGCGATCACCCGCGCCAACGCGCGATCGCTGGTAGAGGACTGGATCTCGAATCCGGCGCGCAGGCGGCCGGCGTGCC GGCGCGCCGACGTCATGTCGCGGCGCGTGATCTCGCTGCTGTCGCAGGCCCCGCTCGTGCTCGGCGAGGCGGACGGAAAG TTCTATCGCCGCTATCTGCGCGCGCTTGCCCGTGACATCCGCCTGCTTCGCTTTGGTTTGCACGATGCTCCTGACGGGGT GTCACGGCTGCAGGTCGTGATCGCGTTGTGTTACGCTTCACTGTGCCTTGCCAACCAGGCCCGCACCATCCGCAGCGCGA CCCGCAAGCTCTCCGAGGAACTGCGGCGGCAGATCCTGCCCGACGGCGGTCATGTCTCGCGCAATCCCGGCGCCCTGATC GAACTGCTGATCGACTTGCTCCCGCTGCGGCAGACCTTCGCCGCGCGCAACATCGCGCCGCCGCCGGCGCTCTTGAACGC CATCGACCGCATGATGCCGATGCTGCGCTTCTTCCGCCACGGCGACGGCAGCTTCGCGCTGTTCAACGGCATGAGCAGCA CGCCGTCCGACCTTCTGGCGACGCTCCTCGCCTATGACGACACCCGCGGCATACCGATGGCCAGCATGCCGCATACGGGC TTTCAGCGGATCGACGCCGGCGCGACGATCCTGATCGTCGATGCCGGGCTGCCGCCGCCGCCGAACCTCAGCGAGGAAGC TCATGCGGGCTGCCTGTCGTTCGAGCTGTCCTCCGGACTGAACCGGATCGTCACAAATTGCGGAATGTCCTCGACCGGAC GCGACACATGGCGCGTGTTCGCGCGCTCGACAGCCGCGCACTCCACGCTGGTCTGCCATCAGACATCCTCGTGTCAGTTC GTCGAACAGTCGGCGATGAAGCGGCTGCTCCAGGGGGCGCCGATCGTCAGCGGTCCGGCCCATGTCGAAAGCCTTCGCGA AACCATCGACGGCGGCGAGCGGCTGACGGCTTCGCATGACGGTTATCTCGCGCGGTTTGGCCTGATCCACCGACGCGTGC TGACGATGGCGCATGACGGCTCGCGGCTGGAGGGCGAGGACATGCTGGAGCCGGCCCCCGGCGGCCGCATCAAGGGCAGC CAGATTCGTTACGCATTGCGGTTTCACCTGCATCCGTCCGTGAAGGCCACTCGCCTCGATGATGCGCATGGGGTGATGCT GGTGTTGCCGAACCGTGAGGTCTGGACGTTCGAGGCGACTCAAGACCGGGTCGAGCTTGAGGACAGCGTTTTTCTCGCCG GCAACGACGGTCCGCGGCGCACGGTGCAGATCGTGATCCACCAGAATGCGCGGGAAGTCTCACGGGTGCGCTGGGGTTTC GTGCGCTCGGCCACCTCGGCCGCGGCCACCAATGCTCGCCGTCAGGCACGGCGCGAGCCGGAATTGCCGCTGTAG
Upstream 100 bases:
>100_bases GGCATTTCAAGATGGTGCGTTGCCGGCCTTTCCGGATTAAAAGGATTCAGTCCTCATCTCCGCAAAGGGATTCGCGGCAA TCCCCACATCGAAGGCGCGC
Downstream 100 bases:
>100_bases GCGCGCATTCCGTCCGTGGTCGGCGCCTGCACATCGGACAACGCCGGTTTCATGCGCTGCGAAATCATGTTAACGGGCGG CCTTGATTTCCCCAGGATCG
Product: heparinase II/III-like
Products: NA
Alternate protein names: Heparinase II/III-Like; Heparinase II/III-Like Protein; Heparinase II/III-Like Family Protein; Cytoplasmic Protein; Heparinase II/Iii Family Protein
Number of amino acids: Translated: 584; Mature: 583
Protein sequence:
>584_residues MSVAHRRRISALVVSRFARRTMARAGDGPAALSRLWPGRADRLTIAPHDLRTADATRAAEIYAGRFVFAGKIVTCHSRSV FDLEPPSEDWEAALLGFGWLRHLRAADTAITRANARSLVEDWISNPARRRPACRRADVMSRRVISLLSQAPLVLGEADGK FYRRYLRALARDIRLLRFGLHDAPDGVSRLQVVIALCYASLCLANQARTIRSATRKLSEELRRQILPDGGHVSRNPGALI ELLIDLLPLRQTFAARNIAPPPALLNAIDRMMPMLRFFRHGDGSFALFNGMSSTPSDLLATLLAYDDTRGIPMASMPHTG FQRIDAGATILIVDAGLPPPPNLSEEAHAGCLSFELSSGLNRIVTNCGMSSTGRDTWRVFARSTAAHSTLVCHQTSSCQF VEQSAMKRLLQGAPIVSGPAHVESLRETIDGGERLTASHDGYLARFGLIHRRVLTMAHDGSRLEGEDMLEPAPGGRIKGS QIRYALRFHLHPSVKATRLDDAHGVMLVLPNREVWTFEATQDRVELEDSVFLAGNDGPRRTVQIVIHQNAREVSRVRWGF VRSATSAAATNARRQARREPELPL
Sequences:
>Translated_584_residues MSVAHRRRISALVVSRFARRTMARAGDGPAALSRLWPGRADRLTIAPHDLRTADATRAAEIYAGRFVFAGKIVTCHSRSV FDLEPPSEDWEAALLGFGWLRHLRAADTAITRANARSLVEDWISNPARRRPACRRADVMSRRVISLLSQAPLVLGEADGK FYRRYLRALARDIRLLRFGLHDAPDGVSRLQVVIALCYASLCLANQARTIRSATRKLSEELRRQILPDGGHVSRNPGALI ELLIDLLPLRQTFAARNIAPPPALLNAIDRMMPMLRFFRHGDGSFALFNGMSSTPSDLLATLLAYDDTRGIPMASMPHTG FQRIDAGATILIVDAGLPPPPNLSEEAHAGCLSFELSSGLNRIVTNCGMSSTGRDTWRVFARSTAAHSTLVCHQTSSCQF VEQSAMKRLLQGAPIVSGPAHVESLRETIDGGERLTASHDGYLARFGLIHRRVLTMAHDGSRLEGEDMLEPAPGGRIKGS QIRYALRFHLHPSVKATRLDDAHGVMLVLPNREVWTFEATQDRVELEDSVFLAGNDGPRRTVQIVIHQNAREVSRVRWGF VRSATSAAATNARRQARREPELPL >Mature_583_residues SVAHRRRISALVVSRFARRTMARAGDGPAALSRLWPGRADRLTIAPHDLRTADATRAAEIYAGRFVFAGKIVTCHSRSVF DLEPPSEDWEAALLGFGWLRHLRAADTAITRANARSLVEDWISNPARRRPACRRADVMSRRVISLLSQAPLVLGEADGKF YRRYLRALARDIRLLRFGLHDAPDGVSRLQVVIALCYASLCLANQARTIRSATRKLSEELRRQILPDGGHVSRNPGALIE LLIDLLPLRQTFAARNIAPPPALLNAIDRMMPMLRFFRHGDGSFALFNGMSSTPSDLLATLLAYDDTRGIPMASMPHTGF QRIDAGATILIVDAGLPPPPNLSEEAHAGCLSFELSSGLNRIVTNCGMSSTGRDTWRVFARSTAAHSTLVCHQTSSCQFV EQSAMKRLLQGAPIVSGPAHVESLRETIDGGERLTASHDGYLARFGLIHRRVLTMAHDGSRLEGEDMLEPAPGGRIKGSQ IRYALRFHLHPSVKATRLDDAHGVMLVLPNREVWTFEATQDRVELEDSVFLAGNDGPRRTVQIVIHQNAREVSRVRWGFV RSATSAAATNARRQARREPELPL
Specific function: Unknown
COG id: COG5360
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64477; Mature: 64346
Theoretical pI: Translated: 10.89; Mature: 10.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVAHRRRISALVVSRFARRTMARAGDGPAALSRLWPGRADRLTIAPHDLRTADATRAAE CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHH IYAGRFVFAGKIVTCHSRSVFDLEPPSEDWEAALLGFGWLRHLRAADTAITRANARSLVE HHHCEEEEECEEEEECCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DWISNPARRRPACRRADVMSRRVISLLSQAPLVLGEADGKFYRRYLRALARDIRLLRFGL HHHCCCHHCCCHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHCC HDAPDGVSRLQVVIALCYASLCLANQARTIRSATRKLSEELRRQILPDGGHVSRNPGALI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH ELLIDLLPLRQTFAARNIAPPPALLNAIDRMMPMLRFFRHGDGSFALFNGMSSTPSDLLA HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHH TLLAYDDTRGIPMASMPHTGFQRIDAGATILIVDAGLPPPPNLSEEAHAGCLSFELSSGL HHHHHCCCCCCCCCCCCCCCHHHHCCCCEEEEEECCCCCCCCCCCHHHCCEEEHHHHHHH NRIVTNCGMSSTGRDTWRVFARSTAAHSTLVCHQTSSCQFVEQSAMKRLLQGAPIVSGPA HHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCHH HVESLRETIDGGERLTASHDGYLARFGLIHRRVLTMAHDGSRLEGEDMLEPAPGGRIKGS HHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCH QIRYALRFHLHPSVKATRLDDAHGVMLVLPNREVWTFEATQDRVELEDSVFLAGNDGPRR HEEEEEEEEECCCCEEEECCCCCCEEEEECCCEEEEEECCCCCEEECCCEEEECCCCCCE TVQIVIHQNAREVSRVRWGFVRSATSAAATNARRQARREPELPL EEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SVAHRRRISALVVSRFARRTMARAGDGPAALSRLWPGRADRLTIAPHDLRTADATRAAE CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHH IYAGRFVFAGKIVTCHSRSVFDLEPPSEDWEAALLGFGWLRHLRAADTAITRANARSLVE HHHCEEEEECEEEEECCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DWISNPARRRPACRRADVMSRRVISLLSQAPLVLGEADGKFYRRYLRALARDIRLLRFGL HHHCCCHHCCCHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHCC HDAPDGVSRLQVVIALCYASLCLANQARTIRSATRKLSEELRRQILPDGGHVSRNPGALI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH ELLIDLLPLRQTFAARNIAPPPALLNAIDRMMPMLRFFRHGDGSFALFNGMSSTPSDLLA HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHH TLLAYDDTRGIPMASMPHTGFQRIDAGATILIVDAGLPPPPNLSEEAHAGCLSFELSSGL HHHHHCCCCCCCCCCCCCCCHHHHCCCCEEEEEECCCCCCCCCCCHHHCCEEEHHHHHHH NRIVTNCGMSSTGRDTWRVFARSTAAHSTLVCHQTSSCQFVEQSAMKRLLQGAPIVSGPA HHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCHH HVESLRETIDGGERLTASHDGYLARFGLIHRRVLTMAHDGSRLEGEDMLEPAPGGRIKGS HHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCH QIRYALRFHLHPSVKATRLDDAHGVMLVLPNREVWTFEATQDRVELEDSVFLAGNDGPRR HEEEEEEEEECCCCEEEECCCCCCEEEEECCCEEEEEECCCCCEEECCCEEEECCCCCCE TVQIVIHQNAREVSRVRWGFVRSATSAAATNARRQARREPELPL EEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA