| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is purH [H]
Identifier: 75674357
GI number: 75674357
Start: 183485
End: 185077
Strand: Direct
Name: purH [H]
Synonym: Nwi_0158
Alternate gene names: 75674357
Gene position: 183485-185077 (Clockwise)
Preceding gene: 75674356
Following gene: 75674358
Centisome position: 5.39
GC content: 65.85
Gene sequence:
>1593_bases ATGACCGACCGACCCCGCCGCGTGACCCGCGCCTTGCTTTCCGTTTCCGACAAGACCGGCCTGACCGAGTTCGCCCGCGC GCTTGCCGACCTCGGCGTCGAACTGGTCTCGACCGGCGGCACCGCCAAGGAAATCGCGGCGGCGGGATTGAAGGTCAGTG ACGTCTCCGACCTGACGGGTTTTCCCGAAATGATGGACGGCCGGGTCAAGACGCTGCATCCGAAGGTGCATGGCGGCCTG CTCGCCATCCGCGACAACGCCGATCATGCGAAGTCCATGAAGGACCACGGCATCGCCCCGATCGATCTTTTGGTCGTCAA TCTCTATCCGTTCGAATCAACGGTCGATAAAGGCGCCGCCTGCGAGGAGTGCATCGAGAATATCGACATCGGCGGCCCCG CGATGATTCGCGCCGCCGCCAAGAACCATGATGACGTAGCGGTCGTGGTCGAACCGCAGGATTATCAGGCGGTGCTTGAC GAACTCAAGGCCAACGCGGGCGCGACGACGTTGAGCTTGCGCAAGCGCCTCGCCGCGAAAGCCTACGCCCGGACCGCCGC CTATGATGCGGCGATCTCCAACTGGTTCGCGGTGCAGCTTGAGACCGATGCGCCCGACTATCGCGCCGTCGGCGGCCGTC TCGCGCAGAGGTTGCGCTATGGCGAGAATCCGCACCAGACCGCCGCGTTCTATCGCACGCCGGAGCGGCGCGCCGGCGTA GCCACCGCGCGGCAGTTGCAGGGCAAGGAACTGTCCTACAACAACATCAACGACACCGACGCGGCTTACGAGTGCGTCGC CGAATTCGATGCGGCGCGCACCGCGGCCTGCGTCATCATCAAGCACGCCAATCCCTGCGGTGTCGCGGAAGGCTCAAGCC TCACCGAAGCCTATCGCCGGGCGCTCGCCTGTGACCAGACCTCGGCCTATGGCGGCATCATAGCCTTCAACCGCACCATC GACGCCGACGCCGCCAATGCGGTGGCCGGCATCTTCACCGAAGTCATCATCGCGCCCGATGCGACCGAGGAGGCGATCGC GGTCATCGGCAAGCGCAAGAACCTGCGGCTGCTGCTGGCCGGCGGCCTGCCCGATCCGCGCGCGCGCGGCCTGACCGCGA AGACGGTCGCCGGCGGGCTTCTGGTGCAGGGCCGTGACAACGCCGTCATTGATGATATGTCACTGAAGGTCGTCACGAAG CGTCCGCCGACCGAGGCGGAGATGCGCGACCTGCGGTTCGCCTTCCGTGTCGCCAAGCACGTCAAGTCGAACACCATCGT CTATGCCAGGGATCTCGCCACCGTCGGCATCGGCGCGGGCCAGATGAGCCGCGTCGATTCCGCGCGCATCGCCGCGCGCA AGGCGGAAGATGCGGCGCGCGATCTGAAGCTCGCCGAGCCCTTGACCAAAGGCTCGGTCGTGGCGTCGGATGCGTTCTTT CCCTTCGCCGACGGCATGCTCGCCTGTATCAAAGCCGGCGCCACCGCGGTCATCCAGCCCGGCGGCTCCATGCGCGACGA GGAGGTGATCAAGGCCGCCGACGAGCATGGCATCGCCATGGTGTTCACCGGCGTCAGGCATTTCCGTCATTAG
Upstream 100 bases:
>100_bases CATTCCGTCCGTGGTCGGCGCCTGCACATCGGACAACGCCGGTTTCATGCGCTGCGAAATCATGTTAACGGGCGGCCTTG ATTTCCCCAGGATCGTCCTC
Downstream 100 bases:
>100_bases AGCGGCCGCCGGTCAAATGGAATCAGCGCCGCCGCTCCAGTTAATTGATTGAGCATCGGATTTATCCCGAAACCGGTTCC CACTTTCGGGTCCGATGCTC
Product: bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
Products: NA
Alternate protein names: Phosphoribosylaminoimidazolecarboxamide formyltransferase; AICAR transformylase; IMP cyclohydrolase; ATIC; IMP synthase; Inosinicase [H]
Number of amino acids: Translated: 530; Mature: 529
Protein sequence:
>530_residues MTDRPRRVTRALLSVSDKTGLTEFARALADLGVELVSTGGTAKEIAAAGLKVSDVSDLTGFPEMMDGRVKTLHPKVHGGL LAIRDNADHAKSMKDHGIAPIDLLVVNLYPFESTVDKGAACEECIENIDIGGPAMIRAAAKNHDDVAVVVEPQDYQAVLD ELKANAGATTLSLRKRLAAKAYARTAAYDAAISNWFAVQLETDAPDYRAVGGRLAQRLRYGENPHQTAAFYRTPERRAGV ATARQLQGKELSYNNINDTDAAYECVAEFDAARTAACVIIKHANPCGVAEGSSLTEAYRRALACDQTSAYGGIIAFNRTI DADAANAVAGIFTEVIIAPDATEEAIAVIGKRKNLRLLLAGGLPDPRARGLTAKTVAGGLLVQGRDNAVIDDMSLKVVTK RPPTEAEMRDLRFAFRVAKHVKSNTIVYARDLATVGIGAGQMSRVDSARIAARKAEDAARDLKLAEPLTKGSVVASDAFF PFADGMLACIKAGATAVIQPGGSMRDEEVIKAADEHGIAMVFTGVRHFRH
Sequences:
>Translated_530_residues MTDRPRRVTRALLSVSDKTGLTEFARALADLGVELVSTGGTAKEIAAAGLKVSDVSDLTGFPEMMDGRVKTLHPKVHGGL LAIRDNADHAKSMKDHGIAPIDLLVVNLYPFESTVDKGAACEECIENIDIGGPAMIRAAAKNHDDVAVVVEPQDYQAVLD ELKANAGATTLSLRKRLAAKAYARTAAYDAAISNWFAVQLETDAPDYRAVGGRLAQRLRYGENPHQTAAFYRTPERRAGV ATARQLQGKELSYNNINDTDAAYECVAEFDAARTAACVIIKHANPCGVAEGSSLTEAYRRALACDQTSAYGGIIAFNRTI DADAANAVAGIFTEVIIAPDATEEAIAVIGKRKNLRLLLAGGLPDPRARGLTAKTVAGGLLVQGRDNAVIDDMSLKVVTK RPPTEAEMRDLRFAFRVAKHVKSNTIVYARDLATVGIGAGQMSRVDSARIAARKAEDAARDLKLAEPLTKGSVVASDAFF PFADGMLACIKAGATAVIQPGGSMRDEEVIKAADEHGIAMVFTGVRHFRH >Mature_529_residues TDRPRRVTRALLSVSDKTGLTEFARALADLGVELVSTGGTAKEIAAAGLKVSDVSDLTGFPEMMDGRVKTLHPKVHGGLL AIRDNADHAKSMKDHGIAPIDLLVVNLYPFESTVDKGAACEECIENIDIGGPAMIRAAAKNHDDVAVVVEPQDYQAVLDE LKANAGATTLSLRKRLAAKAYARTAAYDAAISNWFAVQLETDAPDYRAVGGRLAQRLRYGENPHQTAAFYRTPERRAGVA TARQLQGKELSYNNINDTDAAYECVAEFDAARTAACVIIKHANPCGVAEGSSLTEAYRRALACDQTSAYGGIIAFNRTID ADAANAVAGIFTEVIIAPDATEEAIAVIGKRKNLRLLLAGGLPDPRARGLTAKTVAGGLLVQGRDNAVIDDMSLKVVTKR PPTEAEMRDLRFAFRVAKHVKSNTIVYARDLATVGIGAGQMSRVDSARIAARKAEDAARDLKLAEPLTKGSVVASDAFFP FADGMLACIKAGATAVIQPGGSMRDEEVIKAADEHGIAMVFTGVRHFRH
Specific function: De novo purine biosynthesis; ninth step. De novo purine biosynthesis; tenth step. [C]
COG id: COG0138
COG function: function code F; AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purH family [H]
Homologues:
Organism=Homo sapiens, GI20127454, Length=473, Percent_Identity=39.7463002114165, Blast_Score=280, Evalue=2e-75, Organism=Escherichia coli, GI1790439, Length=538, Percent_Identity=56.5055762081784, Blast_Score=561, Evalue=1e-161, Organism=Caenorhabditis elegans, GI71985564, Length=475, Percent_Identity=36.2105263157895, Blast_Score=251, Evalue=9e-67, Organism=Caenorhabditis elegans, GI71985574, Length=305, Percent_Identity=27.8688524590164, Blast_Score=86, Evalue=3e-17, Organism=Saccharomyces cerevisiae, GI6323056, Length=602, Percent_Identity=33.2225913621262, Blast_Score=289, Evalue=8e-79, Organism=Saccharomyces cerevisiae, GI6323768, Length=474, Percent_Identity=37.5527426160338, Blast_Score=272, Evalue=1e-73, Organism=Drosophila melanogaster, GI24649832, Length=600, Percent_Identity=36.6666666666667, Blast_Score=308, Evalue=8e-84,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 640 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002695 - InterPro: IPR013982 - InterPro: IPR016193 - InterPro: IPR011607 [H]
Pfam domain/function: PF01808 AICARFT_IMPCHas; PF02142 MGS [H]
EC number: =2.1.2.3; =3.5.4.10 [H]
Molecular weight: Translated: 56465; Mature: 56334
Theoretical pI: Translated: 7.31; Mature: 7.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDRPRRVTRALLSVSDKTGLTEFARALADLGVELVSTGGTAKEIAAAGLKVSDVSDLTG CCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHEECCCCCHHHHHHCCCEECCCHHHCC FPEMMDGRVKTLHPKVHGGLLAIRDNADHAKSMKDHGIAPIDLLVVNLYPFESTVDKGAA CHHHHCCCEEEECCHHCCCEEEEECCCHHHHHHHHCCCCCEEEEEEEEECCHHHHCCCCH CEECIENIDIGGPAMIRAAAKNHDDVAVVVEPQDYQAVLDELKANAGATTLSLRKRLAAK HHHHHHHCCCCCHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHH AYARTAAYDAAISNWFAVQLETDAPDYRAVGGRLAQRLRYGENPHQTAAFYRTPERRAGV HHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHEEECCHHHHHH ATARQLQGKELSYNNINDTDAAYECVAEFDAARTAACVIIKHANPCGVAEGSSLTEAYRR HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCHHHHHHHH ALACDQTSAYGGIIAFNRTIDADAANAVAGIFTEVIIAPDATEEAIAVIGKRKNLRLLLA HHHCCCCCCCCCEEEECCEECCCHHHHHHHHHHHHEECCCCCHHHHHHHCCCCCEEEEEE GGLPDPRARGLTAKTVAGGLLVQGRDNAVIDDMSLKVVTKRPPTEAEMRDLRFAFRVAKH CCCCCCHHCCCCHHHHCCCEEEECCCCCEEECCEEEEEECCCCCHHHHHHHHHHHHHHHH VKSNTIVYARDLATVGIGAGQMSRVDSARIAARKAEDAARDLKLAEPLTKGSVVASDAFF HCCCEEEEEECHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCC PFADGMLACIKAGATAVIQPGGSMRDEEVIKAADEHGIAMVFTGVRHFRH CHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHCCCCEEEEEEHHHHHCC >Mature Secondary Structure TDRPRRVTRALLSVSDKTGLTEFARALADLGVELVSTGGTAKEIAAAGLKVSDVSDLTG CCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHEECCCCCHHHHHHCCCEECCCHHHCC FPEMMDGRVKTLHPKVHGGLLAIRDNADHAKSMKDHGIAPIDLLVVNLYPFESTVDKGAA CHHHHCCCEEEECCHHCCCEEEEECCCHHHHHHHHCCCCCEEEEEEEEECCHHHHCCCCH CEECIENIDIGGPAMIRAAAKNHDDVAVVVEPQDYQAVLDELKANAGATTLSLRKRLAAK HHHHHHHCCCCCHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHH AYARTAAYDAAISNWFAVQLETDAPDYRAVGGRLAQRLRYGENPHQTAAFYRTPERRAGV HHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHEEECCHHHHHH ATARQLQGKELSYNNINDTDAAYECVAEFDAARTAACVIIKHANPCGVAEGSSLTEAYRR HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCHHHHHHHH ALACDQTSAYGGIIAFNRTIDADAANAVAGIFTEVIIAPDATEEAIAVIGKRKNLRLLLA HHHCCCCCCCCCEEEECCEECCCHHHHHHHHHHHHEECCCCCHHHHHHHCCCCCEEEEEE GGLPDPRARGLTAKTVAGGLLVQGRDNAVIDDMSLKVVTKRPPTEAEMRDLRFAFRVAKH CCCCCCHHCCCCHHHHCCCEEEECCCCCEEECCEEEEEECCCCCHHHHHHHHHHHHHHHH VKSNTIVYARDLATVGIGAGQMSRVDSARIAARKAEDAARDLKLAEPLTKGSVVASDAFF HCCCEEEEEECHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCC PFADGMLACIKAGATAVIQPGGSMRDEEVIKAADEHGIAMVFTGVRHFRH CHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHCCCCEEEEEEHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12597275 [H]