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The map label for this gene is regB [H]

Identifier: 75674309

GI number: 75674309

Start: 129419

End: 130759

Strand: Direct

Name: regB [H]

Synonym: Nwi_0110

Alternate gene names: 75674309

Gene position: 129419-130759 (Clockwise)

Preceding gene: 75674308

Following gene: 75674310

Centisome position: 3.8

GC content: 62.19

Gene sequence:

>1341_bases
ATGCCCGACGTCGCCGCCTCTGATTTCCGTCATCCCCGCCGCTACGTCCGTCTGGATACGATCTTGCGGCTGCGCTGGCT
TGCGGCGCTGGGGCAGCTCGCGGCGATCTTCGTCGTCGCCCAGGGTCTCCAGTTCGACCTGCCGATCATTCCCTGTGTCG
TGATCGTCGGGTTGTCGTCGCTGCTCAATCTGGTTTTGCAGGTCAGCTTCAATCCGATGCAGCGGTTGGAGCCGCGTCAT
GCCGCGGCGTTGCTTGCGCTGAACATTGCTGAACTGGCCGTCCTGCTGTTCTTCACCGGCGGCTTGCAGAATCCGTTCTC
GTATCTGTTTCTGGCGCCGGTGTTGATCTCGGCCACCGCCTTGCCGACGCGAATGACGATGGCGCTCGGCGGCTTCGCGG
TCGCCTGCGCGACGGTTCTGGGCTTCACCCATTTGCCGCTGCCGTGGGATGCATCCAATCCGCTCATCCTGCCGCCGATC
TATCTCATAGGGGTCTGGTTATCGATCGTTCTCGCGATCGGTGTCACCAGCCTTTACACCTTCCAGGTGACGGAGCAGGC
GCGCAAACTGTCCGACGCTCTCGCGGCGACCGAACTGGTTCTGACCCGCGAACAGCATCTGACCCAGATCGACGGCCTTG
CCGCCGCGGCCGCCCACGAACTCGGAACGCCGCTTTCAACCATTTTCCTGATTTCGCGGGAACTGGAAAAAGCTCTGCAG
GAAAATGGCGCGCAGGAGCCACAGCGGCTGGCCGGTGATCTCAGGATCGTGCGAGAGCAAGCGCAGCGCTGCCGCGATAT
CCTCGCCAAGATCGCGCAACTGTCGTCATCGGGAGCCCCGTTCGACCGTATGCCGCTGTCCACCCTGATCGAGGAAACCG
TTGCGCCGCATCGCGACTTCGGCATCGACATCAAAACCCGGATCGAGGCGGCGGGCGACCATGAACCGGTCGGCATACGC
AACCCGGCGATCCTCTACGGGGTCGGTAACATTCTTGAGAACGCCGTCGACTTCGCCCGTAGCGCGGTCGAAGTGAATGC
CTGGTGGAGCAAGGACAGCGTCGAGATCGTCATTGCCGATGACGGACCGGGCATCGTCCCCGACATTCTCAAGAGGATCG
GCGAGCCTTACCTGTCGCGTCGTCGCAATGTCGGCGATGCACAGAGCGGACGCACAGGGCTGGGTCTCGGAATCTTTATC
GCCCGAACCTTGCTGGAGCGAACCGGGGCAAGGGTGTCCTTCAAGAACCGGACGTTCCCCGATCACGGCGCGGTGGTCAG
GATCGTGTGGCCGCGCATCCGCTTTGAAACAGCGAAAACGATTGCGGAGACAACAGGATAG

Upstream 100 bases:

>100_bases
TCTGATTGAATCGGAAACGAAGTTCTGGATCGTTGGTCTGACGCGTTTTCTTCAAGCGGACCCGTATCAACCTCGCTCGA
AATCGCTATAGTCGTCGAGA

Downstream 100 bases:

>100_bases
TTATCACGGACCGCGACCTTGGCAACAATTGCTTGCGGTGCGCGGTTCAGCGACCATATGATTTCATACCAAACCAAGCG
CGAGGTATCCCTGTGAACGC

Product: histidine kinase

Products: NA

Alternate protein names: Protein prrB [H]

Number of amino acids: Translated: 446; Mature: 445

Protein sequence:

>446_residues
MPDVAASDFRHPRRYVRLDTILRLRWLAALGQLAAIFVVAQGLQFDLPIIPCVVIVGLSSLLNLVLQVSFNPMQRLEPRH
AAALLALNIAELAVLLFFTGGLQNPFSYLFLAPVLISATALPTRMTMALGGFAVACATVLGFTHLPLPWDASNPLILPPI
YLIGVWLSIVLAIGVTSLYTFQVTEQARKLSDALAATELVLTREQHLTQIDGLAAAAAHELGTPLSTIFLISRELEKALQ
ENGAQEPQRLAGDLRIVREQAQRCRDILAKIAQLSSSGAPFDRMPLSTLIEETVAPHRDFGIDIKTRIEAAGDHEPVGIR
NPAILYGVGNILENAVDFARSAVEVNAWWSKDSVEIVIADDGPGIVPDILKRIGEPYLSRRRNVGDAQSGRTGLGLGIFI
ARTLLERTGARVSFKNRTFPDHGAVVRIVWPRIRFETAKTIAETTG

Sequences:

>Translated_446_residues
MPDVAASDFRHPRRYVRLDTILRLRWLAALGQLAAIFVVAQGLQFDLPIIPCVVIVGLSSLLNLVLQVSFNPMQRLEPRH
AAALLALNIAELAVLLFFTGGLQNPFSYLFLAPVLISATALPTRMTMALGGFAVACATVLGFTHLPLPWDASNPLILPPI
YLIGVWLSIVLAIGVTSLYTFQVTEQARKLSDALAATELVLTREQHLTQIDGLAAAAAHELGTPLSTIFLISRELEKALQ
ENGAQEPQRLAGDLRIVREQAQRCRDILAKIAQLSSSGAPFDRMPLSTLIEETVAPHRDFGIDIKTRIEAAGDHEPVGIR
NPAILYGVGNILENAVDFARSAVEVNAWWSKDSVEIVIADDGPGIVPDILKRIGEPYLSRRRNVGDAQSGRTGLGLGIFI
ARTLLERTGARVSFKNRTFPDHGAVVRIVWPRIRFETAKTIAETTG
>Mature_445_residues
PDVAASDFRHPRRYVRLDTILRLRWLAALGQLAAIFVVAQGLQFDLPIIPCVVIVGLSSLLNLVLQVSFNPMQRLEPRHA
AALLALNIAELAVLLFFTGGLQNPFSYLFLAPVLISATALPTRMTMALGGFAVACATVLGFTHLPLPWDASNPLILPPIY
LIGVWLSIVLAIGVTSLYTFQVTEQARKLSDALAATELVLTREQHLTQIDGLAAAAAHELGTPLSTIFLISRELEKALQE
NGAQEPQRLAGDLRIVREQAQRCRDILAKIAQLSSSGAPFDRMPLSTLIEETVAPHRDFGIDIKTRIEAAGDHEPVGIRN
PAILYGVGNILENAVDFARSAVEVNAWWSKDSVEIVIADDGPGIVPDILKRIGEPYLSRRRNVGDAQSGRTGLGLGIFIA
RTLLERTGARVSFKNRTFPDHGAVVRIVWPRIRFETAKTIAETTG

Specific function: Member of the two-component regulatory system RegB/RegA. Involved in the positive regulation of photosynthesis gene expression in response to anaerobiosis. Also involved in positive regulation of the cbbI and cbbII Calvin cycle CO2 fixation operons, as we

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 48626; Mature: 48495

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: PS00445 FGGY_KINASES_2 ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDVAASDFRHPRRYVRLDTILRLRWLAALGQLAAIFVVAQGLQFDLPIIPCVVIVGLSS
CCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
LLNLVLQVSFNPMQRLEPRHAAALLALNIAELAVLLFFTGGLQNPFSYLFLAPVLISATA
HHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHC
LPTRMTMALGGFAVACATVLGFTHLPLPWDASNPLILPPIYLIGVWLSIVLAIGVTSLYT
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHH
FQVTEQARKLSDALAATELVLTREQHLTQIDGLAAAAAHELGTPLSTIFLISRELEKALQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
ENGAQEPQRLAGDLRIVREQAQRCRDILAKIAQLSSSGAPFDRMPLSTLIEETVAPHRDF
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCC
GIDIKTRIEAAGDHEPVGIRNPAILYGVGNILENAVDFARSAVEVNAWWSKDSVEIVIAD
CCCHHHHCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHEEEEEEECCCCEEEEEEC
DGPGIVPDILKRIGEPYLSRRRNVGDAQSGRTGLGLGIFIARTLLERTGARVSFKNRTFP
CCCCCHHHHHHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCC
DHGAVVRIVWPRIRFETAKTIAETTG
CCCCEEEEECCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PDVAASDFRHPRRYVRLDTILRLRWLAALGQLAAIFVVAQGLQFDLPIIPCVVIVGLSS
CCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
LLNLVLQVSFNPMQRLEPRHAAALLALNIAELAVLLFFTGGLQNPFSYLFLAPVLISATA
HHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHC
LPTRMTMALGGFAVACATVLGFTHLPLPWDASNPLILPPIYLIGVWLSIVLAIGVTSLYT
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHH
FQVTEQARKLSDALAATELVLTREQHLTQIDGLAAAAAHELGTPLSTIFLISRELEKALQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
ENGAQEPQRLAGDLRIVREQAQRCRDILAKIAQLSSSGAPFDRMPLSTLIEETVAPHRDF
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCC
GIDIKTRIEAAGDHEPVGIRNPAILYGVGNILENAVDFARSAVEVNAWWSKDSVEIVIAD
CCCHHHHCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHEEEEEEECCCCEEEEEEC
DGPGIVPDILKRIGEPYLSRRRNVGDAQSGRTGLGLGIFIARTLLERTGARVSFKNRTFP
CCCCCHHHHHHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCC
DHGAVVRIVWPRIRFETAKTIAETTG
CCCCEEEEECCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7751278; 10358089 [H]