| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
Click here to switch to the map view.
The map label for this gene is coaBC [H]
Identifier: 75674242
GI number: 75674242
Start: 48119
End: 49558
Strand: Direct
Name: coaBC [H]
Synonym: Nwi_0043
Alternate gene names: 75674242
Gene position: 48119-49558 (Clockwise)
Preceding gene: 75674241
Following gene: 75674243
Centisome position: 1.41
GC content: 66.18
Gene sequence:
>1440_bases ATGGCCAGCCTGACCGTCCGCAAACTCGACGACGCCGTTAAGGCCCGGCTGCGAGCGCGCGCCGCAGTTTCCGGCCGCTC GGTGGAGGAGGAGATCCGCGTCATCCTCCGTGAGGCGACCGTTATTCCCCCCCCCACGGCGTTCGACGATCCGGCCTCCC GCAACGCAGCATCTCTGCGTGACAAAGGCTTCTTCAACGTTTCCAGTCGATTGACGAAAGTGACAGTGATCGTCGGCGGC GGGATCGCCGCCTACAAGGCGCTCGACCTGATCCGGAGGCTCAGGGAACGCGGATTTTTTGTGCGATGCGTCATGACAAA TGCTGCGCAGCAATTCGTCACGCCGCTCAGCGCTGGATCCCTCTCTAACGAGCGTTGCTATACGGATCTGTTCGATGCCA GCAGCGAATTCGACGCGGGCCATATCCGGCTCGCCCGCGACTGTGACCTCATCGTGGTGGCGCCCGCCACCGCTGACCTG ATGGCAAAGATGGCAAACGGCCTCGCCAACGATCTGGCGAGCGCCATTCTGCTCGCCTCCGACAGGCCGGTTTTGCTGGC GCCGGCGATGAATCCGCTGATGTGGAATAACCCGGCGACACGCCGCAACGTGGCGCGGCTCGCGCGCGACGGCGTCGCCA TGATCGGCCCCGACGCCGGCGAGATGGCGGAAGCAGGTGAAGCCGGCGTCGGCCGCATGGCCGAGCCCGTGGCGATCGCC GCCGCCGCCGCGCGGATGCTCGGGCCACCGCAAACGCAAGCGCAACCTCTAAAAGGCCGTCGCGTCCTGATTACCGCCGG CCCGACCCGGGAGGCGATCGATCCGGTGCGCTACATCGCCAACCGCTCCTCGGGCAAGCAGGGCTTTGCCATCGCCGCGG CGGCGCAGGCGGCGGGAGCCGAAGTGACGCTGATTTCTGGCCCCGTGGATCTCGACGACCCCCCCGGCGTCACTGTGGCG CATGTCGAATCCGCGCGCCAGATGCTGGCGGCCGTCGAGGCGGCGCTGCCTTCCGACATTGCGATTTTCACCGCCGCGGT CGCCGACTGGCGTGTCGCGCATGCAGGTGCGCAGAAACTGAAGAAAACCGAAGCCGGAGTGCCGCCGCTGCAACTGATCG AGAACCCGGACATTCTCGCGACCATTTCGAACCTGCGCGACGAACGCCCGCCGCTCGTGATCGGCTTCGCCGCCGAGACC GAGCATCTCATCGGCAACGCCAAGGCGAAATTCGCGCGCAAGGGCTGCGACTGGATGATCGCCAATGACGTATCGCCGGG AACCGGCGTGATGGGCGGCGACCGCAACACCGTGCATCTGCTGACGCGCGGCGAAGACGGAGAGATCAGGACCGAGTCCT TCCCCGTCATGACCAAGGAAGAGGTGGCCGCCATGCTGATCGAACGCATCATCTCAGCCCTGCCGGGTCCGGCGGCATGA
Upstream 100 bases:
>100_bases TCGGCATTCTATGGGCCGTCAGCAGCCGGTTGATCTGATATCAATGCAATCATATGATGAAATCAAATGATATCGATCCG GATGCAGCGCAGGGAGCGAA
Downstream 100 bases:
>100_bases GCGATCCGATCAAGGTCGATGTCCGGCAACTGCCGCATGCCGAGGGCCTTCCGCTGCCGTCCTACCAAAGCACCCAGGCG GCCGGTCTTGACCTCATCGC
Product: bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase
Products: NA
Alternate protein names: DNA/pantothenate metabolism flavoprotein; Phosphopantothenoylcysteine decarboxylase; PPCDC; CoaC; Phosphopantothenate--cysteine ligase; CoaB; PPC synthetase; PPCS; Phosphopantothenoylcysteine synthase [H]
Number of amino acids: Translated: 479; Mature: 478
Protein sequence:
>479_residues MASLTVRKLDDAVKARLRARAAVSGRSVEEEIRVILREATVIPPPTAFDDPASRNAASLRDKGFFNVSSRLTKVTVIVGG GIAAYKALDLIRRLRERGFFVRCVMTNAAQQFVTPLSAGSLSNERCYTDLFDASSEFDAGHIRLARDCDLIVVAPATADL MAKMANGLANDLASAILLASDRPVLLAPAMNPLMWNNPATRRNVARLARDGVAMIGPDAGEMAEAGEAGVGRMAEPVAIA AAAARMLGPPQTQAQPLKGRRVLITAGPTREAIDPVRYIANRSSGKQGFAIAAAAQAAGAEVTLISGPVDLDDPPGVTVA HVESARQMLAAVEAALPSDIAIFTAAVADWRVAHAGAQKLKKTEAGVPPLQLIENPDILATISNLRDERPPLVIGFAAET EHLIGNAKAKFARKGCDWMIANDVSPGTGVMGGDRNTVHLLTRGEDGEIRTESFPVMTKEEVAAMLIERIISALPGPAA
Sequences:
>Translated_479_residues MASLTVRKLDDAVKARLRARAAVSGRSVEEEIRVILREATVIPPPTAFDDPASRNAASLRDKGFFNVSSRLTKVTVIVGG GIAAYKALDLIRRLRERGFFVRCVMTNAAQQFVTPLSAGSLSNERCYTDLFDASSEFDAGHIRLARDCDLIVVAPATADL MAKMANGLANDLASAILLASDRPVLLAPAMNPLMWNNPATRRNVARLARDGVAMIGPDAGEMAEAGEAGVGRMAEPVAIA AAAARMLGPPQTQAQPLKGRRVLITAGPTREAIDPVRYIANRSSGKQGFAIAAAAQAAGAEVTLISGPVDLDDPPGVTVA HVESARQMLAAVEAALPSDIAIFTAAVADWRVAHAGAQKLKKTEAGVPPLQLIENPDILATISNLRDERPPLVIGFAAET EHLIGNAKAKFARKGCDWMIANDVSPGTGVMGGDRNTVHLLTRGEDGEIRTESFPVMTKEEVAAMLIERIISALPGPAA >Mature_478_residues ASLTVRKLDDAVKARLRARAAVSGRSVEEEIRVILREATVIPPPTAFDDPASRNAASLRDKGFFNVSSRLTKVTVIVGGG IAAYKALDLIRRLRERGFFVRCVMTNAAQQFVTPLSAGSLSNERCYTDLFDASSEFDAGHIRLARDCDLIVVAPATADLM AKMANGLANDLASAILLASDRPVLLAPAMNPLMWNNPATRRNVARLARDGVAMIGPDAGEMAEAGEAGVGRMAEPVAIAA AAARMLGPPQTQAQPLKGRRVLITAGPTREAIDPVRYIANRSSGKQGFAIAAAAQAAGAEVTLISGPVDLDDPPGVTVAH VESARQMLAAVEAALPSDIAIFTAAVADWRVAHAGAQKLKKTEAGVPPLQLIENPDILATISNLRDERPPLVIGFAAETE HLIGNAKAKFARKGCDWMIANDVSPGTGVMGGDRNTVHLLTRGEDGEIRTESFPVMTKEEVAAMLIERIISALPGPAA
Specific function: Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine [H]
COG id: COG0452
COG function: function code H; Phosphopantothenoylcysteine synthetase/decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the PPC synthetase family [H]
Homologues:
Organism=Homo sapiens, GI71725351, Length=169, Percent_Identity=33.7278106508876, Blast_Score=76, Evalue=6e-14, Organism=Escherichia coli, GI87082301, Length=403, Percent_Identity=45.1612903225806, Blast_Score=290, Evalue=1e-79, Organism=Drosophila melanogaster, GI24657262, Length=186, Percent_Identity=29.5698924731183, Blast_Score=74, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005252 - InterPro: IPR007085 - InterPro: IPR003382 [H]
Pfam domain/function: PF04127 DFP; PF02441 Flavoprotein [H]
EC number: =4.1.1.36; =6.3.2.5 [H]
Molecular weight: Translated: 50533; Mature: 50401
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASLTVRKLDDAVKARLRARAAVSGRSVEEEIRVILREATVIPPPTAFDDPASRNAASLR CCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHH DKGFFNVSSRLTKVTVIVGGGIAAYKALDLIRRLRERGFFVRCVMTNAAQQFVTPLSAGS CCCCEECCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHCCCCCCC LSNERCYTDLFDASSEFDAGHIRLARDCDLIVVAPATADLMAKMANGLANDLASAILLAS CCCCCHHHHHHCCCCCCCCCCEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHEEEC DRPVLLAPAMNPLMWNNPATRRNVARLARDGVAMIGPDAGEMAEAGEAGVGRMAEPVAIA CCCEEEECCCCCCEECCCCHHHHHHHHHHCCCEEECCCCHHHHHCCCCCCCCCCCHHHHH AAAARMLGPPQTQAQPLKGRRVLITAGPTREAIDPVRYIANRSSGKQGFAIAAAAQAAGA HHHHHHCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCEEEEEEHHCCCC EVTLISGPVDLDDPPGVTVAHVESARQMLAAVEAALPSDIAIFTAAVADWRVAHAGAQKL EEEEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH KKTEAGVPPLQLIENPDILATISNLRDERPPLVIGFAAETEHLIGNAKAKFARKGCDWMI HHHHCCCCCHHHHCCCCHHHHHHHHHCCCCCEEEEECCCCHHHHCCHHHHHHHCCCCEEE ANDVSPGTGVMGGDRNTVHLLTRGEDGEIRTESFPVMTKEEVAAMLIERIISALPGPAA ECCCCCCCCCCCCCCCEEEEEEECCCCCEECCCCCCCCHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure ASLTVRKLDDAVKARLRARAAVSGRSVEEEIRVILREATVIPPPTAFDDPASRNAASLR CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHH DKGFFNVSSRLTKVTVIVGGGIAAYKALDLIRRLRERGFFVRCVMTNAAQQFVTPLSAGS CCCCEECCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHCCCCCCC LSNERCYTDLFDASSEFDAGHIRLARDCDLIVVAPATADLMAKMANGLANDLASAILLAS CCCCCHHHHHHCCCCCCCCCCEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHEEEC DRPVLLAPAMNPLMWNNPATRRNVARLARDGVAMIGPDAGEMAEAGEAGVGRMAEPVAIA CCCEEEECCCCCCEECCCCHHHHHHHHHHCCCEEECCCCHHHHHCCCCCCCCCCCHHHHH AAAARMLGPPQTQAQPLKGRRVLITAGPTREAIDPVRYIANRSSGKQGFAIAAAAQAAGA HHHHHHCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCEEEEEEHHCCCC EVTLISGPVDLDDPPGVTVAHVESARQMLAAVEAALPSDIAIFTAAVADWRVAHAGAQKL EEEEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH KKTEAGVPPLQLIENPDILATISNLRDERPPLVIGFAAETEHLIGNAKAKFARKGCDWMI HHHHCCCCCHHHHCCCCHHHHHHHHHCCCCCEEEEECCCCHHHHCCHHHHHHHCCCCEEE ANDVSPGTGVMGGDRNTVHLLTRGEDGEIRTESFPVMTKEEVAAMLIERIISALPGPAA ECCCCCCCCCCCCCCCEEEEEEECCCCCEECCCCCCCCHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA