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The map label for this gene is sspB [H]

Identifier: 73542773

GI number: 73542773

Start: 3401347

End: 3401835

Strand: Reverse

Name: sspB [H]

Synonym: Reut_A3089

Alternate gene names: 73542773

Gene position: 3401835-3401347 (Counterclockwise)

Preceding gene: 73542774

Following gene: 73542769

Centisome position: 89.37

GC content: 63.8

Gene sequence:

>489_bases
ATGCCTGAAACCTCCACCAAGCCCTATCTGATCCGCGCCATTTACGAGTGGTGCACGGACAATGGCTTCACGCCTTACGT
CGCCGTCTTTGTCGACGCCAACACCAACGTGCCGCGCGAGTTCGTCAAGAACAACGAGATCGTGCTCAACGTGAGCTTCG
ACGCCACCAGCGGCCTAGACATGGGCAACGAGTGGATCACGTTCAGCGCGCGCTTCGGCGGCGTCTCGCGCAAGATCGAC
GTGCCCGTGGAAAACGTACTTGCGATCTATGCGCGCGAGAACGGCCAGGGCATGGCATTCCCGGTCGAGCGCAGCGTGCC
GGAAACGCAGGCCGCAACCGAGCGCGAGAACAACCCGCCGCCCAAGCTGGCGCCCGTGGAATCCGAAACGGCCGTGAGCC
CCGAACCGGGCGCACCGGACGATGACGAGACGCCGCCCCCTGTGCCGCGTATCGGCGGCAAGAAGCCGTCGCTGAAGGTG
GTGAAGTAA

Upstream 100 bases:

>100_bases
ACATCGAGGCGCTGACGCCGTCGGAAAAGGTTATGCGCCGTTAAGCATGGCGGGCCCGATGCTTGCATCGGGCCAACCAC
CGGCGCCATGAAGAAGCACC

Downstream 100 bases:

>100_bases
GTCACGGGTGACTTACCAAAGCGGACCGTGATGCAGTAGAATCGCGGTCTGCATCAGATATGCCGGCTTAGCTCATCAGG
TAGAGCAGTTGATTTGTAAT

Product: ClpXP protease specificity-enhancing factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 161

Protein sequence:

>162_residues
MPETSTKPYLIRAIYEWCTDNGFTPYVAVFVDANTNVPREFVKNNEIVLNVSFDATSGLDMGNEWITFSARFGGVSRKID
VPVENVLAIYARENGQGMAFPVERSVPETQAATERENNPPPKLAPVESETAVSPEPGAPDDDETPPPVPRIGGKKPSLKV
VK

Sequences:

>Translated_162_residues
MPETSTKPYLIRAIYEWCTDNGFTPYVAVFVDANTNVPREFVKNNEIVLNVSFDATSGLDMGNEWITFSARFGGVSRKID
VPVENVLAIYARENGQGMAFPVERSVPETQAATERENNPPPKLAPVESETAVSPEPGAPDDDETPPPVPRIGGKKPSLKV
VK
>Mature_161_residues
PETSTKPYLIRAIYEWCTDNGFTPYVAVFVDANTNVPREFVKNNEIVLNVSFDATSGLDMGNEWITFSARFGGVSRKIDV
PVENVLAIYARENGQGMAFPVERSVPETQAATERENNPPPKLAPVESETAVSPEPGAPDDDETPPPVPRIGGKKPSLKVV
K

Specific function: Seems to act in concert with sspA in the regulation of several proteins during exponential and stationary-phase growth. The exact function of sspB is not yet known [H]

COG id: COG2969

COG function: function code R; Stringent starvation protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789623, Length=131, Percent_Identity=40.4580152671756, Blast_Score=99, Evalue=1e-22,

Paralogues:

None

Copy number: 297 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007481 [H]

Pfam domain/function: PF04386 SspB [H]

EC number: NA

Molecular weight: Translated: 17705; Mature: 17574

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPETSTKPYLIRAIYEWCTDNGFTPYVAVFVDANTNVPREFVKNNEIVLNVSFDATSGLD
CCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHCCCCEEEEEECCCCCCCC
MGNEWITFSARFGGVSRKIDVPVENVLAIYARENGQGMAFPVERSVPETQAATERENNPP
CCCEEEEEEECCCCCCEEEECCHHHEEEEEECCCCCEEEEECCCCCCCCHHHHCCCCCCC
PKLAPVESETAVSPEPGAPDDDETPPPVPRIGGKKPSLKVVK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEC
>Mature Secondary Structure 
PETSTKPYLIRAIYEWCTDNGFTPYVAVFVDANTNVPREFVKNNEIVLNVSFDATSGLD
CCCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHCCCCEEEEEECCCCCCCC
MGNEWITFSARFGGVSRKIDVPVENVLAIYARENGQGMAFPVERSVPETQAATERENNPP
CCCEEEEEEECCCCCCEEEECCHHHEEEEEECCCCCEEEEECCCCCCCCHHHHCCCCCCC
PKLAPVESETAVSPEPGAPDDDETPPPVPRIGGKKPSLKVVK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]