| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is lon [H]
Identifier: 73541076
GI number: 73541076
Start: 1490132
End: 1492543
Strand: Direct
Name: lon [H]
Synonym: Reut_A1382
Alternate gene names: 73541076
Gene position: 1490132-1492543 (Clockwise)
Preceding gene: 73541075
Following gene: 73541077
Centisome position: 39.15
GC content: 61.61
Gene sequence:
>2412_bases ATGTCCGGAACACAACTCCTCCCGGCCGAGCCGATTCGCCTCCCACTGTTGCCCTTGCGCGACGTGGTGGTGTTTCCGCA CATGGTGATCCCGTTGTTCGTGGGACGCCCGAAGTCCATCAAGGCGCTTGAGACTGCGATGGAGTCGGGCAAGAGCATTA TGCTCGTGGCGCAGAAGACTGCCGCCAAAGACGAACCGACCGCCGACGACCTGTATGAGGTCGGCTGCATCGCTAACATT CTGCAGATGCTGAAGCTGCCCGACGGTACCGTGAAGGTGCTGGTGGAAGGCACGCAGCGTGCAAACATCCGCGAGGTCAG CGAGGACGAGTCGCACTTCATGTGCGAAGCCGTTCCCGTGCCACCCGCAGCGGTTGAAAGCGCCGAGACCGAGGCCCTGC GCCGCGCGATCGTGTCGCAGTTCGACCAGTACGTGAAGCTCAACAAGAAGATCCCGCCGGAGATCCTGACCTCGCTGTCG GGCATCGATGAGGCAGGCCGCCTGGCCGACACGATCGCCGCGCACCTGCCGATCAAGCTCGAGCAGAAGCAGAAGATCCT GGAAATGGTCAATGTGACCGAGCGCCTGGAAAGCCTGCTGTCGCAACTCGAGGGCGAGATCGACATCCTGCAGGTCGAAA AGCGCATCCGTGGCCGCGTCAAGCGCCAGATGGAAAAGAGCCAGCGCGAGTACTACCTGAACGAGCAGGTCAAGGCGATC CAGAAGGAACTCGGCGAAGGCGAAGAGGGCGCCGACCTGGAAGAACTCGACAAGCGCATCAAGGCTGCGCGCATGCCGAA GGAAGCCAAGAAGAAGGCCGACGCTGAATTCAAGAAGCTCAAGCTGATGTCGCCGATGTCGGCGGAAGCCACCGTCGTGC GCAACTACATCGACACGCTGGTGAACCTGCCGTGGCGCAAGAAGAGCAAGGTCAACAACGACCTGGCCAACGCCGAGCGC GTGCTTGATGAAGACCACTACGGTCTCGAGAAGGTCAAGGAACGTATCCTTGAATATCTTGCCGTGCAACAGCGCGTGGA CAAGGTCAAGGCTCCGATCCTGTGCCTGGTCGGGCCTCCCGGCGTGGGTAAGACCTCGCTCGGCCAGTCGGTGGCGCGCG CGACGAACCGCAAGTTCGTGCGCATGGCACTCGGTGGCGTGCGTGACGAAGCCGAGATCCGCGGTCACCGCCGTACCTAC ATTGGTTCGATGCCGGGCAAGATCCTGCAGAGCCTGTCGAAGGTCGGCGTGCGCAATCCGCTCTTCCTGCTCGACGAAAT CGACAAGATGGGCATGGATTTCCGTGGCGACCCGTCTTCGGCGCTGCTTGAAGTGCTGGACCCGGAACAGAACCACACGT TCCAGGACCACTACATCGAAGTGGACTTCGACCTGTCCGACGTAATGTTCGTGGCGACGTCGAACTCGCTGAACATTCCG CCGCCGCTGCTCGACCGTATGGAAGTGATCCGCCTGTCGGGTTACACCGAGGACGAGAAGCTCAACATCGCGACGCGATA CCTGCTGCCCAAGCAGATCAAGAACAACGGTCTGAAGGCTGGCGAGATCGAGGTCACCGATGCGGCGATCCGCGACATCA TTCGCTATTACACACGCGAAGCCGGTGTGCGTTCGCTTGAGCGCGAGGTGTCCAAGATTGCTCGCAAGGCGGTCAAGCTC CTGCTGCTGAAGAAGGAGTCGGGCACGATCAAGGTCGATTCGGAGAACCTCGACAAGTTCCTCGGCGTGCGCAAGTACGA CTTCGGCCTGGCCGGCAAGGAAAACCAGGTCGGTCAGGTGACCGGTCTGGCGTGGACGGAAGTGGGCGGCGATCTGCTGA CCATCGAAGCCGCGATCATGCCGGGCAAGGGCAACATCACGCGTACTGGTTCGCTAGGCGACGTGATGAAGGAGTCGGTC GAGGCGGCACGTTCGGTGGTGCGTTCGCGGGCGCGTCGGCTGGGCATCACGGATGAGATGTTCGAGAAGCGTGACATCCA TATCCACGTGCCTGAAGGCGCAACGCCCAAGGACGGTCCGTCGGCTGGCGGTGCCATGACCACGGCGCTGGTGTCGGTGC TGACCGGTATCCCGGTGCGGGCGGATGTCGCCATGACCGGAGAGATCACACTGCGCGGTGAAGTGTTGCCGATCGGTGGC CTCAAGGAAAAGCTGCTGGCTGCCCACCGTGGTGGTATCAAGCTGGTGCTGATCCCTGAGGAAAACGTGAAGGATCTCGC CGAAATTCCCGACAACGTGAAGAACGCCATCGAGATCGTGCCGGTCCGCTGGATCGACAAGGTGCTGGAGCTGGCACTCG AGCGCAAGCCCGAGCCGCTGCCCGAGGAAGACGCCAAGCCTGCCGAAGTGGCGGACAAGGCGGCGTCCAAGGTCGAGATG ATCCACCACTGA
Upstream 100 bases:
>100_bases GCGGCATCAGCCTGTCAATCCAAATCGGTTTCGTCTCGGTATCTTGTAATCGATTTGGGCGGCCCAATTTACGCCTTAAA TGACTGACTTGGGGAAAATG
Downstream 100 bases:
>100_bases TCCGTCTGCTTCACAGCAGGTGAGAACGCCGCGGAGTGAAACCCGCGGCGTTTTACTTTCCGGAGGTGGCTTCTGCGAGA TTGTTGAGATTATTGCGTTC
Product: Lon-A peptidase
Products: NA
Alternate protein names: ATP-dependent protease La [H]
Number of amino acids: Translated: 803; Mature: 802
Protein sequence:
>803_residues MSGTQLLPAEPIRLPLLPLRDVVVFPHMVIPLFVGRPKSIKALETAMESGKSIMLVAQKTAAKDEPTADDLYEVGCIANI LQMLKLPDGTVKVLVEGTQRANIREVSEDESHFMCEAVPVPPAAVESAETEALRRAIVSQFDQYVKLNKKIPPEILTSLS GIDEAGRLADTIAAHLPIKLEQKQKILEMVNVTERLESLLSQLEGEIDILQVEKRIRGRVKRQMEKSQREYYLNEQVKAI QKELGEGEEGADLEELDKRIKAARMPKEAKKKADAEFKKLKLMSPMSAEATVVRNYIDTLVNLPWRKKSKVNNDLANAER VLDEDHYGLEKVKERILEYLAVQQRVDKVKAPILCLVGPPGVGKTSLGQSVARATNRKFVRMALGGVRDEAEIRGHRRTY IGSMPGKILQSLSKVGVRNPLFLLDEIDKMGMDFRGDPSSALLEVLDPEQNHTFQDHYIEVDFDLSDVMFVATSNSLNIP PPLLDRMEVIRLSGYTEDEKLNIATRYLLPKQIKNNGLKAGEIEVTDAAIRDIIRYYTREAGVRSLEREVSKIARKAVKL LLLKKESGTIKVDSENLDKFLGVRKYDFGLAGKENQVGQVTGLAWTEVGGDLLTIEAAIMPGKGNITRTGSLGDVMKESV EAARSVVRSRARRLGITDEMFEKRDIHIHVPEGATPKDGPSAGGAMTTALVSVLTGIPVRADVAMTGEITLRGEVLPIGG LKEKLLAAHRGGIKLVLIPEENVKDLAEIPDNVKNAIEIVPVRWIDKVLELALERKPEPLPEEDAKPAEVADKAASKVEM IHH
Sequences:
>Translated_803_residues MSGTQLLPAEPIRLPLLPLRDVVVFPHMVIPLFVGRPKSIKALETAMESGKSIMLVAQKTAAKDEPTADDLYEVGCIANI LQMLKLPDGTVKVLVEGTQRANIREVSEDESHFMCEAVPVPPAAVESAETEALRRAIVSQFDQYVKLNKKIPPEILTSLS GIDEAGRLADTIAAHLPIKLEQKQKILEMVNVTERLESLLSQLEGEIDILQVEKRIRGRVKRQMEKSQREYYLNEQVKAI QKELGEGEEGADLEELDKRIKAARMPKEAKKKADAEFKKLKLMSPMSAEATVVRNYIDTLVNLPWRKKSKVNNDLANAER VLDEDHYGLEKVKERILEYLAVQQRVDKVKAPILCLVGPPGVGKTSLGQSVARATNRKFVRMALGGVRDEAEIRGHRRTY IGSMPGKILQSLSKVGVRNPLFLLDEIDKMGMDFRGDPSSALLEVLDPEQNHTFQDHYIEVDFDLSDVMFVATSNSLNIP PPLLDRMEVIRLSGYTEDEKLNIATRYLLPKQIKNNGLKAGEIEVTDAAIRDIIRYYTREAGVRSLEREVSKIARKAVKL LLLKKESGTIKVDSENLDKFLGVRKYDFGLAGKENQVGQVTGLAWTEVGGDLLTIEAAIMPGKGNITRTGSLGDVMKESV EAARSVVRSRARRLGITDEMFEKRDIHIHVPEGATPKDGPSAGGAMTTALVSVLTGIPVRADVAMTGEITLRGEVLPIGG LKEKLLAAHRGGIKLVLIPEENVKDLAEIPDNVKNAIEIVPVRWIDKVLELALERKPEPLPEEDAKPAEVADKAASKVEM IHH >Mature_802_residues SGTQLLPAEPIRLPLLPLRDVVVFPHMVIPLFVGRPKSIKALETAMESGKSIMLVAQKTAAKDEPTADDLYEVGCIANIL QMLKLPDGTVKVLVEGTQRANIREVSEDESHFMCEAVPVPPAAVESAETEALRRAIVSQFDQYVKLNKKIPPEILTSLSG IDEAGRLADTIAAHLPIKLEQKQKILEMVNVTERLESLLSQLEGEIDILQVEKRIRGRVKRQMEKSQREYYLNEQVKAIQ KELGEGEEGADLEELDKRIKAARMPKEAKKKADAEFKKLKLMSPMSAEATVVRNYIDTLVNLPWRKKSKVNNDLANAERV LDEDHYGLEKVKERILEYLAVQQRVDKVKAPILCLVGPPGVGKTSLGQSVARATNRKFVRMALGGVRDEAEIRGHRRTYI GSMPGKILQSLSKVGVRNPLFLLDEIDKMGMDFRGDPSSALLEVLDPEQNHTFQDHYIEVDFDLSDVMFVATSNSLNIPP PLLDRMEVIRLSGYTEDEKLNIATRYLLPKQIKNNGLKAGEIEVTDAAIRDIIRYYTREAGVRSLEREVSKIARKAVKLL LLKKESGTIKVDSENLDKFLGVRKYDFGLAGKENQVGQVTGLAWTEVGGDLLTIEAAIMPGKGNITRTGSLGDVMKESVE AARSVVRSRARRLGITDEMFEKRDIHIHVPEGATPKDGPSAGGAMTTALVSVLTGIPVRADVAMTGEITLRGEVLPIGGL KEKLLAAHRGGIKLVLIPEENVKDLAEIPDNVKNAIEIVPVRWIDKVLELALERKPEPLPEEDAKPAEVADKAASKVEMI HH
Specific function: ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced
COG id: COG0466
COG function: function code O; ATP-dependent Lon protease, bacterial type
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Lon domain [H]
Homologues:
Organism=Homo sapiens, GI31377667, Length=838, Percent_Identity=39.1408114558473, Blast_Score=530, Evalue=1e-150, Organism=Homo sapiens, GI21396489, Length=827, Percent_Identity=37.0012091898428, Blast_Score=512, Evalue=1e-145, Organism=Escherichia coli, GI1786643, Length=770, Percent_Identity=70.6493506493507, Blast_Score=1093, Evalue=0.0, Organism=Caenorhabditis elegans, GI17505831, Length=705, Percent_Identity=40.1418439716312, Blast_Score=490, Evalue=1e-138, Organism=Caenorhabditis elegans, GI17556486, Length=801, Percent_Identity=33.3333333333333, Blast_Score=421, Evalue=1e-117, Organism=Saccharomyces cerevisiae, GI6319449, Length=710, Percent_Identity=41.1267605633803, Blast_Score=513, Evalue=1e-146, Organism=Drosophila melanogaster, GI24666867, Length=620, Percent_Identity=43.8709677419355, Blast_Score=511, Evalue=1e-145, Organism=Drosophila melanogaster, GI221513036, Length=620, Percent_Identity=43.8709677419355, Blast_Score=511, Evalue=1e-144,
Paralogues:
None
Copy number: 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR003959 - InterPro: IPR008269 - InterPro: IPR004815 - InterPro: IPR003111 - InterPro: IPR001984 - InterPro: IPR015947 - InterPro: IPR020568 [H]
Pfam domain/function: PF00004 AAA; PF02190 LON; PF05362 Lon_C [H]
EC number: =3.4.21.53 [H]
Molecular weight: Translated: 88933; Mature: 88802
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGTQLLPAEPIRLPLLPLRDVVVFPHMVIPLFVGRPKSIKALETAMESGKSIMLVAQKT CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEEECC AAKDEPTADDLYEVGCIANILQMLKLPDGTVKVLVEGTQRANIREVSEDESHFMCEAVPV CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHCCCCCCCEEEEECCC PPAAVESAETEALRRAIVSQFDQYVKLNKKIPPEILTSLSGIDEAGRLADTIAAHLPIKL CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCH EQKQKILEMVNVTERLESLLSQLEGEIDILQVEKRIRGRVKRQMEKSQREYYLNEQVKAI HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QKELGEGEEGADLEELDKRIKAARMPKEAKKKADAEFKKLKLMSPMSAEATVVRNYIDTL HHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHCHHHHHHHHCCCCCHHHHHHHHHHHHH VNLPWRKKSKVNNDLANAERVLDEDHYGLEKVKERILEYLAVQQRVDKVKAPILCLVGPP HCCCCCHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCC GVGKTSLGQSVARATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGKILQSLSKVGVRNP CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHCCCCHHHHHHHHHHCCCCCC LFLLDEIDKMGMDFRGDPSSALLEVLDPEQNHTFQDHYIEVDFDLSDVMFVATSNSLNIP HHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCC PPLLDRMEVIRLSGYTEDEKLNIATRYLLPKQIKNNGLKAGEIEVTDAAIRDIIRYYTRE CHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHH AGVRSLEREVSKIARKAVKLLLLKKESGTIKVDSENLDKFLGVRKYDFGLAGKENQVGQV HHHHHHHHHHHHHHHHHHHHHHEECCCCEEEECHHHHHHHHCCHHCCCCCCCCCCCCCEE TGLAWTEVGGDLLTIEAAIMPGKGNITRTGSLGDVMKESVEAARSVVRSRARRLGITDEM ECEEHHHCCCCEEEEEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHH FEKRDIHIHVPEGATPKDGPSAGGAMTTALVSVLTGIPVRADVAMTGEITLRGEVLPIGG HCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEECEEEECEEEEECEEEECCC LKEKLLAAHRGGIKLVLIPEENVKDLAEIPDNVKNAIEIVPVRWIDKVLELALERKPEPL HHHHHHHHHCCCEEEEEECCCCHHHHHHCCHHHHHHHEEECHHHHHHHHHHHHHCCCCCC PEEDAKPAEVADKAASKVEMIHH CCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure SGTQLLPAEPIRLPLLPLRDVVVFPHMVIPLFVGRPKSIKALETAMESGKSIMLVAQKT CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEEECC AAKDEPTADDLYEVGCIANILQMLKLPDGTVKVLVEGTQRANIREVSEDESHFMCEAVPV CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHCCCCCCCEEEEECCC PPAAVESAETEALRRAIVSQFDQYVKLNKKIPPEILTSLSGIDEAGRLADTIAAHLPIKL CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCH EQKQKILEMVNVTERLESLLSQLEGEIDILQVEKRIRGRVKRQMEKSQREYYLNEQVKAI HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QKELGEGEEGADLEELDKRIKAARMPKEAKKKADAEFKKLKLMSPMSAEATVVRNYIDTL HHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHCHHHHHHHHCCCCCHHHHHHHHHHHHH VNLPWRKKSKVNNDLANAERVLDEDHYGLEKVKERILEYLAVQQRVDKVKAPILCLVGPP HCCCCCHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCC GVGKTSLGQSVARATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGKILQSLSKVGVRNP CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHCCCCHHHHHHHHHHCCCCCC LFLLDEIDKMGMDFRGDPSSALLEVLDPEQNHTFQDHYIEVDFDLSDVMFVATSNSLNIP HHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCC PPLLDRMEVIRLSGYTEDEKLNIATRYLLPKQIKNNGLKAGEIEVTDAAIRDIIRYYTRE CHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHH AGVRSLEREVSKIARKAVKLLLLKKESGTIKVDSENLDKFLGVRKYDFGLAGKENQVGQV HHHHHHHHHHHHHHHHHHHHHHEECCCCEEEECHHHHHHHHCCHHCCCCCCCCCCCCCEE TGLAWTEVGGDLLTIEAAIMPGKGNITRTGSLGDVMKESVEAARSVVRSRARRLGITDEM ECEEHHHCCCCEEEEEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHH FEKRDIHIHVPEGATPKDGPSAGGAMTTALVSVLTGIPVRADVAMTGEITLRGEVLPIGG HCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEECEEEECEEEEECEEEECCC LKEKLLAAHRGGIKLVLIPEENVKDLAEIPDNVKNAIEIVPVRWIDKVLELALERKPEPL HHHHHHHHHCCCEEEEEECCCCHHHHHHCCHHHHHHHEEECHHHHHHHHHHHHHCCCCCC PEEDAKPAEVADKAASKVEMIHH CCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8981986; 12620739 [H]