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The map label for this gene is ubiD [H]

Identifier: 73540469

GI number: 73540469

Start: 829303

End: 830904

Strand: Reverse

Name: ubiD [H]

Synonym: Reut_A0765

Alternate gene names: 73540469

Gene position: 830904-829303 (Counterclockwise)

Preceding gene: 73540471

Following gene: 73540468

Centisome position: 21.83

GC content: 65.23

Gene sequence:

>1602_bases
GTGTGTATCGTGGCACACATCATTTCGATGCCACGGCCCTTCCGCAGTGCCGCACCAAGAACTGAATTCACCATGCAATA
CAAAGACTTGCGCGATTTCATCAGCCAGCTTGAGCAACTGGGAGAGCTGCGGCGCGTCAGCACGCCGGTGTCTCCGAATC
TGGAGATGACGGAGATTTGCGACCGCCTGCTGCGCGCTGGCGGGCCGGCAGTCCTGTTCGAACGGCCGGCAGGCTTCCGC
AGCCCTGAAGGCACCTATAGCGTCCCGGTGCTCGCCAATCTGTTTGGGACGACACACAGGGTCGCGCTCGGCATGGGGGC
GCAATCACTAGAGGACCTGCGCGACATCGGCCGCGTGCTGTCGGCCCTCAAGGAACCCGAGCCGCCGCGCGGACTCCGCG
AGGCCGGCAAGCTGTTCACGCTGGCCAAGTCGGTGTGGGACATGGCGCCCAAGCGTGTCAGCAGCCCAGCCTGCCAGGAG
ATCGTCTGGGAAGGCAATGACGTCGACCTGGCACGCCTGCCGATCCAGACCTGCTGGCCCGGCGACGCCGCGCCGCTGAT
CACCTGGGGGCTGGTCGTGACCAAGGGCCCGCACAAGAAGCGGCAGAACCTTGGAATCTACCGCCAGCAGGTGATCAGCC
GCAACCAGGTCATCATGCGCTGGCTCGCGCATCGGGGCGGCGCGCTCGATTTCCGCGAACACGCGCTGGCCAATCCCGGC
AAGCCGTTTCCGATCGCCGTGGCGCTTGGCGCCGATCCTGCAACGATCCTCGGCGCGGTGACCCCGGTTCCGGATACCTT
GTCGGAGTACCAGTTCGCCGGCCTGCTGCGAGGCAGCCGCACGGCGCTGGCCGGATGCCTGACGCCCACGTTGTCCGAAC
TAAGCGTGCCGGCATCGGCAGAGATCGTGCTGGAAGGCCATATCCAGCCCGACCCGGACCATCCATCGGGCTACCAGCAT
GCGCTCGAAGGCCCCTACGGCGACCACACCGGCTATTACAACGAGCAGGACTGGTTCCCGGTCTTCACGATCGACCGCAT
CACCATGCGGCGCGACCCGATCTACCACTCGACCTATACCGGCAAACCGCCCGACGAGCCCGCCGTGCTCGGCGTGGCGC
TCAACGAGGTGTTCGTGCCGCTGCTGCAGAAGCAGTTCCCGGAGATCACCGACTTCTATTTGCCTCCCGAAGGCTGCAGC
TACCGCATGGCGCTGGTGCGCATGAAGAAGCAATACGCCGGCCACGCCAAGCGCGTGATGTTCGGCGTGTGGAGCTTCCT
GCGGCAGTTCATGTACACGAAGTTCATCGTGGTCGTGGACGACGACGTGGATGTGCGCGACTGGAAGGAGGTGATCTGGG
CCATCACCACGCGCGTCGATCCGGCGCGCGACACGGTGCTGGTCGAGAACACGCCGATCGACTATCTCGACTTCGCCTCG
CCGGTGTCCGGGCTTGGCTCCAAGATGGGCATCGACGCCACCGACAAGTGGCCGGGCGAAACCACGCGCGAATGGGGCCG
CACCATCAGCATGGATCCGGCGGTCAAGGCAAAGGTCGACGGCATGATGGCGACGCTGTTCGACCGCCCCGCCGGCACGT
GA

Upstream 100 bases:

>100_bases
GGGCCTAGGCTTTCCCCGATTCTGACAGCGCTTGCAGCGTCAAAAAACTTACAATTCGCATTGACGCAAACAAGCGATTT
TTTTGCCGGGACGCCTGCAC

Downstream 100 bases:

>100_bases
GCGCGGCCGCCGCTATCATGTCAGGCTGAACCCCGGGGCGCATCGAAAGGCACCCGCCCTGCCCCGTTCGACCACACCAT
CCGATGCCCGCGTAGACGGG

Product: 3-octaprenyl-4hydroxybenzoate decarboxylase

Products: NA

Alternate protein names: Polyprenyl p-hydroxybenzoate decarboxylase [H]

Number of amino acids: Translated: 533; Mature: 533

Protein sequence:

>533_residues
MCIVAHIISMPRPFRSAAPRTEFTMQYKDLRDFISQLEQLGELRRVSTPVSPNLEMTEICDRLLRAGGPAVLFERPAGFR
SPEGTYSVPVLANLFGTTHRVALGMGAQSLEDLRDIGRVLSALKEPEPPRGLREAGKLFTLAKSVWDMAPKRVSSPACQE
IVWEGNDVDLARLPIQTCWPGDAAPLITWGLVVTKGPHKKRQNLGIYRQQVISRNQVIMRWLAHRGGALDFREHALANPG
KPFPIAVALGADPATILGAVTPVPDTLSEYQFAGLLRGSRTALAGCLTPTLSELSVPASAEIVLEGHIQPDPDHPSGYQH
ALEGPYGDHTGYYNEQDWFPVFTIDRITMRRDPIYHSTYTGKPPDEPAVLGVALNEVFVPLLQKQFPEITDFYLPPEGCS
YRMALVRMKKQYAGHAKRVMFGVWSFLRQFMYTKFIVVVDDDVDVRDWKEVIWAITTRVDPARDTVLVENTPIDYLDFAS
PVSGLGSKMGIDATDKWPGETTREWGRTISMDPAVKAKVDGMMATLFDRPAGT

Sequences:

>Translated_533_residues
MCIVAHIISMPRPFRSAAPRTEFTMQYKDLRDFISQLEQLGELRRVSTPVSPNLEMTEICDRLLRAGGPAVLFERPAGFR
SPEGTYSVPVLANLFGTTHRVALGMGAQSLEDLRDIGRVLSALKEPEPPRGLREAGKLFTLAKSVWDMAPKRVSSPACQE
IVWEGNDVDLARLPIQTCWPGDAAPLITWGLVVTKGPHKKRQNLGIYRQQVISRNQVIMRWLAHRGGALDFREHALANPG
KPFPIAVALGADPATILGAVTPVPDTLSEYQFAGLLRGSRTALAGCLTPTLSELSVPASAEIVLEGHIQPDPDHPSGYQH
ALEGPYGDHTGYYNEQDWFPVFTIDRITMRRDPIYHSTYTGKPPDEPAVLGVALNEVFVPLLQKQFPEITDFYLPPEGCS
YRMALVRMKKQYAGHAKRVMFGVWSFLRQFMYTKFIVVVDDDVDVRDWKEVIWAITTRVDPARDTVLVENTPIDYLDFAS
PVSGLGSKMGIDATDKWPGETTREWGRTISMDPAVKAKVDGMMATLFDRPAGT
>Mature_533_residues
MCIVAHIISMPRPFRSAAPRTEFTMQYKDLRDFISQLEQLGELRRVSTPVSPNLEMTEICDRLLRAGGPAVLFERPAGFR
SPEGTYSVPVLANLFGTTHRVALGMGAQSLEDLRDIGRVLSALKEPEPPRGLREAGKLFTLAKSVWDMAPKRVSSPACQE
IVWEGNDVDLARLPIQTCWPGDAAPLITWGLVVTKGPHKKRQNLGIYRQQVISRNQVIMRWLAHRGGALDFREHALANPG
KPFPIAVALGADPATILGAVTPVPDTLSEYQFAGLLRGSRTALAGCLTPTLSELSVPASAEIVLEGHIQPDPDHPSGYQH
ALEGPYGDHTGYYNEQDWFPVFTIDRITMRRDPIYHSTYTGKPPDEPAVLGVALNEVFVPLLQKQFPEITDFYLPPEGCS
YRMALVRMKKQYAGHAKRVMFGVWSFLRQFMYTKFIVVVDDDVDVRDWKEVIWAITTRVDPARDTVLVENTPIDYLDFAS
PVSGLGSKMGIDATDKWPGETTREWGRTISMDPAVKAKVDGMMATLFDRPAGT

Specific function: Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol [H]

COG id: COG0043

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiD family [H]

Homologues:

Organism=Escherichia coli, GI1790277, Length=502, Percent_Identity=68.1274900398406, Blast_Score=711, Evalue=0.0,
Organism=Saccharomyces cerevisiae, GI6320748, Length=477, Percent_Identity=24.7379454926625, Blast_Score=109, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002830
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01977 UbiD [H]

EC number: 4.1.1.-

Molecular weight: Translated: 59240; Mature: 59240

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCIVAHIISMPRPFRSAAPRTEFTMQYKDLRDFISQLEQLGELRRVSTPVSPNLEMTEIC
CCHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
DRLLRAGGPAVLFERPAGFRSPEGTYSVPVLANLFGTTHRVALGMGAQSLEDLRDIGRVL
HHHHHCCCCEEEEECCCCCCCCCCCEEHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHH
SALKEPEPPRGLREAGKLFTLAKSVWDMAPKRVSSPACQEIVWEGNDVDLARLPIQTCWP
HHHCCCCCCHHHHHHHHHHHHHHHHHHHCHHHCCCHHHHHHHCCCCCCCEEECCHHHCCC
GDAAPLITWGLVVTKGPHKKRQNLGIYRQQVISRNQVIMRWLAHRGGALDFREHALANPG
CCCCHHHEEEEEEECCCCHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCC
KPFPIAVALGADPATILGAVTPVPDTLSEYQFAGLLRGSRTALAGCLTPTLSELSVPASA
CCCEEEEEECCCCHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHCCCCCE
EIVLEGHIQPDPDHPSGYQHALEGPYGDHTGYYNEQDWFPVFTIDRITMRRDPIYHSTYT
EEEEECCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCEEEEEEEHHHHCCCCCEECCCC
GKPPDEPAVLGVALNEVFVPLLQKQFPEITDFYLPPEGCSYRMALVRMKKQYAGHAKRVM
CCCCCCCCEEHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
FGVWSFLRQFMYTKFIVVVDDDVDVRDWKEVIWAITTRVDPARDTVLVENTPIDYLDFAS
HHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHC
PVSGLGSKMGIDATDKWPGETTREWGRTISMDPAVKAKVDGMMATLFDRPAGT
HHHHCCCCCCCCCCCCCCCCCHHHHCCEECCCCCHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MCIVAHIISMPRPFRSAAPRTEFTMQYKDLRDFISQLEQLGELRRVSTPVSPNLEMTEIC
CCHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
DRLLRAGGPAVLFERPAGFRSPEGTYSVPVLANLFGTTHRVALGMGAQSLEDLRDIGRVL
HHHHHCCCCEEEEECCCCCCCCCCCEEHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHH
SALKEPEPPRGLREAGKLFTLAKSVWDMAPKRVSSPACQEIVWEGNDVDLARLPIQTCWP
HHHCCCCCCHHHHHHHHHHHHHHHHHHHCHHHCCCHHHHHHHCCCCCCCEEECCHHHCCC
GDAAPLITWGLVVTKGPHKKRQNLGIYRQQVISRNQVIMRWLAHRGGALDFREHALANPG
CCCCHHHEEEEEEECCCCHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCC
KPFPIAVALGADPATILGAVTPVPDTLSEYQFAGLLRGSRTALAGCLTPTLSELSVPASA
CCCEEEEEECCCCHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHCCCCCE
EIVLEGHIQPDPDHPSGYQHALEGPYGDHTGYYNEQDWFPVFTIDRITMRRDPIYHSTYT
EEEEECCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCEEEEEEEHHHHCCCCCEECCCC
GKPPDEPAVLGVALNEVFVPLLQKQFPEITDFYLPPEGCSYRMALVRMKKQYAGHAKRVM
CCCCCCCCEEHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
FGVWSFLRQFMYTKFIVVVDDDVDVRDWKEVIWAITTRVDPARDTVLVENTPIDYLDFAS
HHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHC
PVSGLGSKMGIDATDKWPGETTREWGRTISMDPAVKAKVDGMMATLFDRPAGT
HHHHCCCCCCCCCCCCCCCCCHHHHCCEECCCCCHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA