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The map label for this gene is ybdL [C]

Identifier: 73540471

GI number: 73540471

Start: 832618

End: 833799

Strand: Reverse

Name: ybdL [C]

Synonym: Reut_A0767

Alternate gene names: 73540471

Gene position: 833799-832618 (Counterclockwise)

Preceding gene: 73540472

Following gene: 73540469

Centisome position: 21.9

GC content: 67.85

Gene sequence:

>1182_bases
ATGGACCCGCAGCGCCTCGCCACCGCCTCCCGCCTTGCCAATATCGACGCGTTCCACGTCATGGAACTGGCCAAGCAGGC
CAATGAACTCGAACGCGTGGGCCGCCACATCATCCACATGGGGATCGGAGAGCCCGACTTCACCGCCGCCGAGCCCGTGG
TGCGCGCCGCGGAGGCCGCCATGCGGCGCGGCGTGACGCAGTACACGGGTGCGCTCGGCATCCACGCGCTGCGCGAAGCC
ATCGCCGGCTACTACAAGACCATGTACGGGCTCGAGATCCCGGCGCGGCGCGTGATCGTCACGGCCGGCGCATCGGGCGC
GCTGCTGCTGGCCTGCGCGGTGCTGGTGGAGATCGGCGCCGAGGTGCTGATGCCGGACCCGAGCTATCCGTGCAACCGGC
ATTTCGTCGCGGCCTTCGATGGCGCGGCGCGCATGATCCCGAGCGGCCCGGCCGAGCGCTTCCAGCTCACCGCCGCGCAG
GTCGAAGCGCACTGGAACGAACGCACGCGCGGCGTGCTGCTGGCGTCGCCGTCAAACCCGACCGGCACGTCGATCCTGCC
CGACGAACTCGGCCGCATCCTGCAGGCGGTGCGTGCGCGGCAGGGCTTCGCCATCCTCGACGAGATCTACCAGGGCCTGT
CGTATGACGCGCCGCCGGTATCCGCACTGAGCCTCGACGACAACGTCGTCACGGTCAACAGCTTCTCGAAGTACTTCAAT
ATGACCGGCTGGCGCCTCGGCTGGCTCGTGGTGCCGGACGCGCTCGTGGCGGATTTCGAGAAAGTCGCGCAGAACCTGTT
CATCTGCGCCTCGGCCGTGGCCCAGCATGCCGCACTGGCGTGCTTCTCGCCCGAAGCCATGGCAATCTATGACGAACGCA
AGGCAGAATTCCGCCGCCGCCGCGACCTGATCGTGCCGGCGCTGGAATCGCTCGGCCTGCACGTGCCGGTCATGCCGGAC
GGTGCCTTCTATGTCTACGCGGATTGCCGCCAGGTCAACCACCCCGCGGCTGGCGATGCCGACAAGCTGACACAGGCGAT
GCTGCACGACGCCGGCGTGGTCATGGTGCCAGGCCAGGATTTCGGGCCTCACACGGCGCAGGACTACATCCGGATCTCGT
ACGCGACCTCGCGCCAGAACATCGAGGAAGCCATGGCCCGGCTGCAGAAGCTGTTTCGCTGA

Upstream 100 bases:

>100_bases
GCGCCGGGGTTCAACGCCCAGCCGCAACGGATACGACACCCGCTGACGCGGGTGTTTTTACTTCTATCACCCGCCCGGGA
ACGGGCATCGCCGAATCGCC

Downstream 100 bases:

>100_bases
GCGGCGGCGCCGAAAACGGCCAAAGCAAAAAAGCACCCCGCGGGGTGCTTTTTTCTTTGAGGGCGATCGTTGCTTCAGGC
GCTCTGCTGCGTATTGCTCG

Product: aminotransferase

Products: NA

Alternate protein names: AspAT; Transaminase A [H]

Number of amino acids: Translated: 393; Mature: 393

Protein sequence:

>393_residues
MDPQRLATASRLANIDAFHVMELAKQANELERVGRHIIHMGIGEPDFTAAEPVVRAAEAAMRRGVTQYTGALGIHALREA
IAGYYKTMYGLEIPARRVIVTAGASGALLLACAVLVEIGAEVLMPDPSYPCNRHFVAAFDGAARMIPSGPAERFQLTAAQ
VEAHWNERTRGVLLASPSNPTGTSILPDELGRILQAVRARQGFAILDEIYQGLSYDAPPVSALSLDDNVVTVNSFSKYFN
MTGWRLGWLVVPDALVADFEKVAQNLFICASAVAQHAALACFSPEAMAIYDERKAEFRRRRDLIVPALESLGLHVPVMPD
GAFYVYADCRQVNHPAAGDADKLTQAMLHDAGVVMVPGQDFGPHTAQDYIRISYATSRQNIEEAMARLQKLFR

Sequences:

>Translated_393_residues
MDPQRLATASRLANIDAFHVMELAKQANELERVGRHIIHMGIGEPDFTAAEPVVRAAEAAMRRGVTQYTGALGIHALREA
IAGYYKTMYGLEIPARRVIVTAGASGALLLACAVLVEIGAEVLMPDPSYPCNRHFVAAFDGAARMIPSGPAERFQLTAAQ
VEAHWNERTRGVLLASPSNPTGTSILPDELGRILQAVRARQGFAILDEIYQGLSYDAPPVSALSLDDNVVTVNSFSKYFN
MTGWRLGWLVVPDALVADFEKVAQNLFICASAVAQHAALACFSPEAMAIYDERKAEFRRRRDLIVPALESLGLHVPVMPD
GAFYVYADCRQVNHPAAGDADKLTQAMLHDAGVVMVPGQDFGPHTAQDYIRISYATSRQNIEEAMARLQKLFR
>Mature_393_residues
MDPQRLATASRLANIDAFHVMELAKQANELERVGRHIIHMGIGEPDFTAAEPVVRAAEAAMRRGVTQYTGALGIHALREA
IAGYYKTMYGLEIPARRVIVTAGASGALLLACAVLVEIGAEVLMPDPSYPCNRHFVAAFDGAARMIPSGPAERFQLTAAQ
VEAHWNERTRGVLLASPSNPTGTSILPDELGRILQAVRARQGFAILDEIYQGLSYDAPPVSALSLDDNVVTVNSFSKYFN
MTGWRLGWLVVPDALVADFEKVAQNLFICASAVAQHAALACFSPEAMAIYDERKAEFRRRRDLIVPALESLGLHVPVMPD
GAFYVYADCRQVNHPAAGDADKLTQAMLHDAGVVMVPGQDFGPHTAQDYIRISYATSRQNIEEAMARLQKLFR

Specific function: Unknown

COG id: COG0436

COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI95147551, Length=417, Percent_Identity=26.8585131894484, Blast_Score=144, Evalue=1e-34,
Organism=Homo sapiens, GI169881279, Length=417, Percent_Identity=26.8585131894484, Blast_Score=144, Evalue=1e-34,
Organism=Homo sapiens, GI56713256, Length=347, Percent_Identity=26.8011527377522, Blast_Score=131, Evalue=1e-30,
Organism=Homo sapiens, GI56713254, Length=347, Percent_Identity=26.8011527377522, Blast_Score=130, Evalue=2e-30,
Organism=Homo sapiens, GI4507369, Length=375, Percent_Identity=25.3333333333333, Blast_Score=112, Evalue=4e-25,
Organism=Homo sapiens, GI169881281, Length=406, Percent_Identity=23.6453201970443, Blast_Score=96, Evalue=7e-20,
Organism=Escherichia coli, GI1786816, Length=374, Percent_Identity=28.8770053475936, Blast_Score=133, Evalue=2e-32,
Organism=Escherichia coli, GI1788722, Length=371, Percent_Identity=27.2237196765499, Blast_Score=118, Evalue=6e-28,
Organism=Escherichia coli, GI1788627, Length=414, Percent_Identity=23.6714975845411, Blast_Score=100, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI71994476, Length=391, Percent_Identity=25.5754475703325, Blast_Score=118, Evalue=5e-27,
Organism=Caenorhabditis elegans, GI71994472, Length=391, Percent_Identity=25.5754475703325, Blast_Score=118, Evalue=5e-27,
Organism=Caenorhabditis elegans, GI17567663, Length=381, Percent_Identity=25.1968503937008, Blast_Score=104, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI17567369, Length=317, Percent_Identity=23.9747634069401, Blast_Score=93, Evalue=3e-19,
Organism=Saccharomyces cerevisiae, GI6322401, Length=394, Percent_Identity=23.0964467005076, Blast_Score=107, Evalue=3e-24,
Organism=Drosophila melanogaster, GI28573069, Length=392, Percent_Identity=26.7857142857143, Blast_Score=135, Evalue=4e-32,
Organism=Drosophila melanogaster, GI24646114, Length=392, Percent_Identity=26.7857142857143, Blast_Score=135, Evalue=4e-32,
Organism=Drosophila melanogaster, GI28573067, Length=392, Percent_Identity=26.7857142857143, Blast_Score=135, Evalue=4e-32,
Organism=Drosophila melanogaster, GI28573065, Length=392, Percent_Identity=26.7857142857143, Blast_Score=135, Evalue=4e-32,
Organism=Drosophila melanogaster, GI18859735, Length=399, Percent_Identity=25.5639097744361, Blast_Score=102, Evalue=5e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001176
- InterPro:   IPR004839
- InterPro:   IPR004838
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00155 Aminotran_1_2 [H]

EC number: =2.6.1.1 [H]

Molecular weight: Translated: 42875; Mature: 42875

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: PS00105 AA_TRANSFER_CLASS_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPQRLATASRLANIDAFHVMELAKQANELERVGRHIIHMGIGEPDFTAAEPVVRAAEAA
CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHH
MRRGVTQYTGALGIHALREAIAGYYKTMYGLEIPARRVIVTAGASGALLLACAVLVEIGA
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHCCC
EVLMPDPSYPCNRHFVAAFDGAARMIPSGPAERFQLTAAQVEAHWNERTRGVLLASPSNP
CEECCCCCCCCCCCEEEEECCCHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCC
TGTSILPDELGRILQAVRARQGFAILDEIYQGLSYDAPPVSALSLDDNVVTVNSFSKYFN
CCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCEEEECCCCEEEECCHHHHHC
MTGWRLGWLVVPDALVADFEKVAQNLFICASAVAQHAALACFSPEAMAIYDERKAEFRRR
CCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
RDLIVPALESLGLHVPVMPDGAFYVYADCRQVNHPAAGDADKLTQAMLHDAGVVMVPGQD
HHHHHHHHHHCCCEEEECCCCCEEEEEEHHHCCCCCCCCHHHHHHHHHHCCCEEEECCCC
FGPHTAQDYIRISYATSRQNIEEAMARLQKLFR
CCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MDPQRLATASRLANIDAFHVMELAKQANELERVGRHIIHMGIGEPDFTAAEPVVRAAEAA
CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHH
MRRGVTQYTGALGIHALREAIAGYYKTMYGLEIPARRVIVTAGASGALLLACAVLVEIGA
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHCCC
EVLMPDPSYPCNRHFVAAFDGAARMIPSGPAERFQLTAAQVEAHWNERTRGVLLASPSNP
CEECCCCCCCCCCCEEEEECCCHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCC
TGTSILPDELGRILQAVRARQGFAILDEIYQGLSYDAPPVSALSLDDNVVTVNSFSKYFN
CCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCEEEECCCCEEEECCHHHHHC
MTGWRLGWLVVPDALVADFEKVAQNLFICASAVAQHAALACFSPEAMAIYDERKAEFRRR
CCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
RDLIVPALESLGLHVPVMPDGAFYVYADCRQVNHPAAGDADKLTQAMLHDAGVVMVPGQD
HHHHHHHHHHCCCEEEECCCCCEEEEEEHHHCCCCCCCCHHHHHHHHHHCCCEEEECCCC
FGPHTAQDYIRISYATSRQNIEEAMARLQKLFR
CCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]